RNA–Protein interactions for RNA: ENST00000567719.1

GFER-204, Transcript of growth factor, augmenter of liver regeneration, humanhuman

TSL 1 (best) BASIC

Gene GFER, Length 483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFER-204ENST00000567719 NISCHQ9Y2I1 1504 aa35.29■■■■□ 3.24
GFER-204ENST00000567719 CCDC180Q9P1Z9 1646 aa31.22■■■□□ 2.59
GFER-204ENST00000567719 ABCC9O60706 1549 aa30.33■■■□□ 2.45
GFER-204ENST00000567719 ZCCHC6Q5VYS8 1495 aaKnown RBP29.48■■■□□ 2.31
GFER-204ENST00000567719 NACADO15069 1562 aa29.26■■■□□ 2.27
GFER-204ENST00000567719 MYO15BQ96JP2 1530 aa29.21■■■□□ 2.27
GFER-204ENST00000567719 DCAF1Q9Y4B6 1507 aa29.2■■■□□ 2.26
GFER-204ENST00000567719 RB1CC1Q8TDY2 1594 aa29.19■■■□□ 2.26
GFER-204ENST00000567719 DCAF8L2P0C7V8 631 aa29.14■■■□□ 2.26
GFER-204ENST00000567719 UNC13AQ9UPW8 1703 aa28.73■■■□□ 2.19
GFER-204ENST00000567719 BICRAQ9NZM4 1560 aa28.54■■■□□ 2.16
GFER-204ENST00000567719 SCRIBQ14160 1630 aa28.54■■■□□ 2.16
GFER-204ENST00000567719 PABPN1Q86U42 306 aaKnown RBP eCLIP28.38■■■□□ 2.13
GFER-204ENST00000567719 SHROOM4Q9ULL8 1493 aa28.03■■■□□ 2.08
GFER-204ENST00000567719 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
GFER-204ENST00000567719 EIF4G1Q04637 1599 aaKnown RBP27.65■■■□□ 2.02
GFER-204ENST00000567719 CECR2Q9BXF3 1484 aa27.56■■■□□ 2
GFER-204ENST00000567719 CC2D2AQ9P2K1 1620 aa27.47■■□□□ 1.99
GFER-204ENST00000567719 SMARCA4P51532 1647 aa27.34■■□□□ 1.97
GFER-204ENST00000567719 MROH2BQ7Z745 1585 aa27.27■■□□□ 1.96
GFER-204ENST00000567719 BAZ1AQ9NRL2 1556 aaPredicted RBP27.25■■□□□ 1.95
GFER-204ENST00000567719 ATAD2BQ9ULI0 1458 aa27.13■■□□□ 1.93
GFER-204ENST00000567719 PEG3Q9GZU2 1588 aa27.09■■□□□ 1.93
GFER-204ENST00000567719 NCAPD3P42695 1498 aa27.06■■□□□ 1.92
GFER-204ENST00000567719 RSF1Q96T23 1441 aaPredicted RBP27.01■■□□□ 1.91
GFER-204ENST00000567719 SMARCA2P51531 1590 aa27■■□□□ 1.91
GFER-204ENST00000567719 WIZO95785 1651 aa26.96■■□□□ 1.91
GFER-204ENST00000567719 HMGXB3Q12766 1538 aa26.92■■□□□ 1.9
GFER-204ENST00000567719 BAZ1BQ9UIG0 1483 aaKnown RBP26.82■■□□□ 1.88
GFER-204ENST00000567719 TOP2AP11388 1531 aaKnown RBP26.63■■□□□ 1.85
GFER-204ENST00000567719 NESP48681 1621 aa26.41■■□□□ 1.82
GFER-204ENST00000567719 CCDC88BA6NC98 1476 aa26.35■■□□□ 1.81
GFER-204ENST00000567719 SUPT5HO00267 1087 aaKnown RBP26.33■■□□□ 1.81
GFER-204ENST00000567719 LAMC3Q9Y6N6 1575 aa26.24■■□□□ 1.79
GFER-204ENST00000567719 CADPSQ9ULU8 1353 aa26.23■■□□□ 1.79
GFER-204ENST00000567719 CFTRP13569 1480 aa26.18■■□□□ 1.78
GFER-204ENST00000567719 KIF21AQ7Z4S6 1674 aa26.06■■□□□ 1.76
GFER-204ENST00000567719 ERCC6Q03468 1493 aa26.04■■□□□ 1.76
GFER-204ENST00000567719 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
GFER-204ENST00000567719 PRDM2Q13029 1718 aa25.96■■□□□ 1.75
GFER-204ENST00000567719 CUX2O14529 1486 aa25.96■■□□□ 1.75
GFER-204ENST00000567719 THOC2Q8NI27 1593 aaKnown RBP25.95■■□□□ 1.74
GFER-204ENST00000567719 FANCD2Q9BXW9 1451 aa25.94■■□□□ 1.74
GFER-204ENST00000567719 CEP164Q9UPV0 1460 aa25.84■■□□□ 1.73
GFER-204ENST00000567719 MRC2Q9UBG0 1479 aa25.79■■□□□ 1.72
GFER-204ENST00000567719 URB2Q14146 1524 aaKnown RBP25.77■■□□□ 1.72
GFER-204ENST00000567719 WDR62O43379 1518 aa25.76■■□□□ 1.71
GFER-204ENST00000567719 TOPBP1Q92547 1522 aa25.59■■□□□ 1.69
GFER-204ENST00000567719 CUX1P39880 1505 aa25.56■■□□□ 1.68
GFER-204ENST00000567719 DNMBPQ6XZF7 1577 aa25.56■■□□□ 1.68
GFER-204ENST00000567719 DNAJC5Q9H3Z4 198 aa25.53■■□□□ 1.68
GFER-204ENST00000567719 ABCC8Q09428 1581 aa25.49■■□□□ 1.67
GFER-204ENST00000567719 SYNJ1O43426 1573 aa25.42■■□□□ 1.66
GFER-204ENST00000567719 POLA1P09884 1462 aaPredicted RBP25.4■■□□□ 1.66
GFER-204ENST00000567719 FGD5Q6ZNL6 1462 aa25.36■■□□□ 1.65
GFER-204ENST00000567719 TARBP1Q13395 1621 aaKnown RBP25.36■■□□□ 1.65
GFER-204ENST00000567719 WRNQ14191 1432 aaPredicted RBP eCLIP25.36■■□□□ 1.65
GFER-204ENST00000567719 BIVM-ERCC5R4GMW8 1640 aa25.34■■□□□ 1.65
GFER-204ENST00000567719 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
GFER-204ENST00000567719 RAD54L2Q9Y4B4 1467 aa25.31■■□□□ 1.64
GFER-204ENST00000567719 ZNF608Q9ULD9 1512 aaPredicted RBP25.3■■□□□ 1.64
GFER-204ENST00000567719 IFT140Q96RY7 1462 aa25.29■■□□□ 1.64
GFER-204ENST00000567719 WDR97A6NE52 1622 aa25.22■■□□□ 1.63
GFER-204ENST00000567719 SOGA1O94964 1423 aa25.21■■□□□ 1.63
GFER-204ENST00000567719 EIF4G3O43432 1585 aaKnown RBP25.15■■□□□ 1.62
GFER-204ENST00000567719 AQRO60306 1485 aaKnown RBP eCLIP25.13■■□□□ 1.61
GFER-204ENST00000567719 ABCA10Q8WWZ4 1543 aa25.12■■□□□ 1.61
GFER-204ENST00000567719 TDRD9Q8NDG6 1382 aaKnown RBP25.1■■□□□ 1.61
GFER-204ENST00000567719 ABCA5Q8WWZ7 1642 aa25.05■■□□□ 1.6
GFER-204ENST00000567719 GAPVD1Q14C86 1478 aa24.95■■□□□ 1.58
GFER-204ENST00000567719 PBRM1Q86U86 1689 aa24.91■■□□□ 1.58
GFER-204ENST00000567719 GRIN2BQ13224 1484 aa24.89■■□□□ 1.57
GFER-204ENST00000567719 SNAPC4Q5SXM2 1469 aa24.88■■□□□ 1.57
GFER-204ENST00000567719 CHIC1Q5VXU3 224 aa24.84■■□□□ 1.57
GFER-204ENST00000567719 RUSC2Q8N2Y8 1516 aa24.83■■□□□ 1.57
GFER-204ENST00000567719 TRIM41Q8WV44 630 aa24.8■■□□□ 1.56
GFER-204ENST00000567719 MAGI1Q96QZ7 1491 aaPredicted RBP24.8■■□□□ 1.56
GFER-204ENST00000567719 CHD1O14646 1710 aa24.79■■□□□ 1.56
GFER-204ENST00000567719 ERICH3Q5RHP9 1530 aa24.78■■□□□ 1.56
GFER-204ENST00000567719 OSCARQ8IYS5 282 aa24.78■■□□□ 1.56
GFER-204ENST00000567719 ADAMTS12P58397 1594 aa24.77■■□□□ 1.56
GFER-204ENST00000567719 IGF1RP08069 1367 aa24.75■■□□□ 1.55
GFER-204ENST00000567719 KIF27Q86VH2 1401 aa24.75■■□□□ 1.55
GFER-204ENST00000567719 SYNJ2O15056 1496 aa24.72■■□□□ 1.55
GFER-204ENST00000567719 FHAD1B1AJZ9 1412 aa24.65■■□□□ 1.54
GFER-204ENST00000567719 GRIN2AQ12879 1464 aa24.62■■□□□ 1.53
GFER-204ENST00000567719 FBLN2P98095 1184 aa24.58■■□□□ 1.53
GFER-204ENST00000567719 CLASP1Q7Z460 1538 aa24.57■■□□□ 1.52
GFER-204ENST00000567719 CUL7Q14999 1698 aa24.57■■□□□ 1.52
GFER-204ENST00000567719 CEP170Q5SW79 1584 aa24.57■■□□□ 1.52
GFER-204ENST00000567719 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
GFER-204ENST00000567719 NUP160Q12769 1436 aa24.55■■□□□ 1.52
GFER-204ENST00000567719 CARMIL1Q5VZK9 1371 aa24.52■■□□□ 1.52
GFER-204ENST00000567719 PRXQ9BXM0 1461 aa24.48■■□□□ 1.51
GFER-204ENST00000567719 EEA1Q15075 1411 aa24.4■■□□□ 1.5
GFER-204ENST00000567719 RAPGEF2Q9Y4G8 1499 aa24.39■■□□□ 1.5
GFER-204ENST00000567719 RIMBP3CA6NJZ7 1639 aa24.39■■□□□ 1.49
GFER-204ENST00000567719 RIMBP3BA6NNM3 1639 aa24.39■■□□□ 1.49
GFER-204ENST00000567719 RIMBP3Q9UFD9 1639 aa24.39■■□□□ 1.49
GFER-204ENST00000567719 CSRNP3Q8WYN3 585 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms