RNA–Protein interactions for RNA: ENST00000567676.1

BCKDK-209, Transcript of branched chain ketoacid dehydrogenase kinase, humanhuman

TSL 2

Gene BCKDK, Length 554 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCKDK-209ENST00000567676 NISCHQ9Y2I1 1504 aa51.05■■■■■ 5.76
BCKDK-209ENST00000567676 CCDC180Q9P1Z9 1646 aa45.7■■■■■ 4.91
BCKDK-209ENST00000567676 ABCC9O60706 1549 aa45.67■■■■■ 4.9
BCKDK-209ENST00000567676 RB1CC1Q8TDY2 1594 aa43.43■■■■■ 4.54
BCKDK-209ENST00000567676 DCAF8L2P0C7V8 631 aa43.18■■■■■ 4.5
BCKDK-209ENST00000567676 NACADO15069 1562 aa43.14■■■■■ 4.5
BCKDK-209ENST00000567676 DNAJC5BQ9UF47 199 aa42.73■■■■■ 4.43
BCKDK-209ENST00000567676 PABPN1Q86U42 306 aaKnown RBP eCLIP42.6■■■■■ 4.41
BCKDK-209ENST00000567676 UNC13AQ9UPW8 1703 aa42.6■■■■■ 4.41
BCKDK-209ENST00000567676 MYO15BQ96JP2 1530 aa42.51■■■■■ 4.39
BCKDK-209ENST00000567676 ZCCHC6Q5VYS8 1495 aaKnown RBP42.32■■■■■ 4.37
BCKDK-209ENST00000567676 BICRAQ9NZM4 1560 aa42.23■■■■■ 4.35
BCKDK-209ENST00000567676 DCAF1Q9Y4B6 1507 aa42.06■■■■■ 4.32
BCKDK-209ENST00000567676 SCRIBQ14160 1630 aa41.8■■■■■ 4.28
BCKDK-209ENST00000567676 SHROOM4Q9ULL8 1493 aa41.46■■■■■ 4.23
BCKDK-209ENST00000567676 CC2D2AQ9P2K1 1620 aa41.23■■■■■ 4.19
BCKDK-209ENST00000567676 EIF4G1Q04637 1599 aaKnown RBP41.15■■■■■ 4.18
BCKDK-209ENST00000567676 CECR2Q9BXF3 1484 aa41.06■■■■■ 4.16
BCKDK-209ENST00000567676 NCAPD3P42695 1498 aa39.82■■■■□ 3.97
BCKDK-209ENST00000567676 SMARCA4P51532 1647 aa39.81■■■■□ 3.96
BCKDK-209ENST00000567676 ATAD2BQ9ULI0 1458 aa39.79■■■■□ 3.96
BCKDK-209ENST00000567676 SMARCA2P51531 1590 aa39.63■■■■□ 3.94
BCKDK-209ENST00000567676 BAZ1AQ9NRL2 1556 aaPredicted RBP39.59■■■■□ 3.93
BCKDK-209ENST00000567676 HMGXB3Q12766 1538 aa39.54■■■■□ 3.92
BCKDK-209ENST00000567676 BAZ1BQ9UIG0 1483 aaKnown RBP39.42■■■■□ 3.9
BCKDK-209ENST00000567676 MROH2BQ7Z745 1585 aa39.41■■■■□ 3.9
BCKDK-209ENST00000567676 ERCC6Q03468 1493 aa39.37■■■■□ 3.89
BCKDK-209ENST00000567676 PEG3Q9GZU2 1588 aa39.33■■■■□ 3.89
BCKDK-209ENST00000567676 NESP48681 1621 aa39.31■■■■□ 3.88
BCKDK-209ENST00000567676 CUX2O14529 1486 aa39.14■■■■□ 3.86
BCKDK-209ENST00000567676 DNAJC5Q9H3Z4 198 aa39■■■■□ 3.83
BCKDK-209ENST00000567676 WIZO95785 1651 aa38.99■■■■□ 3.83
BCKDK-209ENST00000567676 LAMC3Q9Y6N6 1575 aa38.91■■■■□ 3.82
BCKDK-209ENST00000567676 KIF21AQ7Z4S6 1674 aa38.81■■■■□ 3.8
BCKDK-209ENST00000567676 THOC2Q8NI27 1593 aaKnown RBP38.8■■■■□ 3.8
BCKDK-209ENST00000567676 PDS5BQ9NTI5 1447 aa38.68■■■■□ 3.78
BCKDK-209ENST00000567676 CADPSQ9ULU8 1353 aa38.66■■■■□ 3.78
BCKDK-209ENST00000567676 RSF1Q96T23 1441 aaPredicted RBP38.61■■■■□ 3.77
BCKDK-209ENST00000567676 TOP2AP11388 1531 aaKnown RBP38.4■■■■□ 3.74
BCKDK-209ENST00000567676 MRC2Q9UBG0 1479 aa38.37■■■■□ 3.73
BCKDK-209ENST00000567676 FANCD2Q9BXW9 1451 aa38.26■■■■□ 3.72
BCKDK-209ENST00000567676 CEP164Q9UPV0 1460 aa38.26■■■■□ 3.72
BCKDK-209ENST00000567676 WDR62O43379 1518 aa38.26■■■■□ 3.72
BCKDK-209ENST00000567676 CFTRP13569 1480 aa38.24■■■■□ 3.71
BCKDK-209ENST00000567676 CCDC88BA6NC98 1476 aa38.02■■■■□ 3.68
BCKDK-209ENST00000567676 URB2Q14146 1524 aaKnown RBP37.97■■■■□ 3.67
BCKDK-209ENST00000567676 PRDM2Q13029 1718 aa37.95■■■■□ 3.67
BCKDK-209ENST00000567676 TOPBP1Q92547 1522 aa37.56■■■■□ 3.6
BCKDK-209ENST00000567676 TRIM41Q8WV44 630 aa37.5■■■■□ 3.59
BCKDK-209ENST00000567676 ZNF608Q9ULD9 1512 aaPredicted RBP37.5■■■■□ 3.59
BCKDK-209ENST00000567676 IFT140Q96RY7 1462 aa37.46■■■■□ 3.59
BCKDK-209ENST00000567676 OSCARQ8IYS5 282 aa37.44■■■■□ 3.58
BCKDK-209ENST00000567676 DNMBPQ6XZF7 1577 aa37.42■■■■□ 3.58
BCKDK-209ENST00000567676 ABCC8Q09428 1581 aa37.38■■■■□ 3.57
BCKDK-209ENST00000567676 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.56
BCKDK-209ENST00000567676 TARBP1Q13395 1621 aaKnown RBP37.21■■■■□ 3.55
BCKDK-209ENST00000567676 AQRO60306 1485 aaKnown RBP eCLIP37.18■■■■□ 3.54
BCKDK-209ENST00000567676 POLA1P09884 1462 aaPredicted RBP37.18■■■■□ 3.54
BCKDK-209ENST00000567676 SUPT5HO00267 1087 aaKnown RBP37.17■■■■□ 3.54
BCKDK-209ENST00000567676 RAD54L2Q9Y4B4 1467 aa37.12■■■■□ 3.53
BCKDK-209ENST00000567676 CHD1O14646 1710 aa37.02■■■■□ 3.52
BCKDK-209ENST00000567676 SOGA1O94964 1423 aa37.02■■■■□ 3.52
BCKDK-209ENST00000567676 RIMBP3CA6NJZ7 1639 aa37.01■■■■□ 3.52
BCKDK-209ENST00000567676 RIMBP3BA6NNM3 1639 aa37.01■■■■□ 3.52
BCKDK-209ENST00000567676 RIMBP3Q9UFD9 1639 aa37.01■■■■□ 3.52
BCKDK-209ENST00000567676 CUX1P39880 1505 aa37■■■■□ 3.51
BCKDK-209ENST00000567676 FGD5Q6ZNL6 1462 aa37■■■■□ 3.51
BCKDK-209ENST00000567676 TDRD9Q8NDG6 1382 aaKnown RBP36.97■■■■□ 3.51
BCKDK-209ENST00000567676 FBLN2P98095 1184 aa36.93■■■■□ 3.5
BCKDK-209ENST00000567676 ARHGEF11O15085 1522 aa36.87■■■■□ 3.49
BCKDK-209ENST00000567676 SNAPC4Q5SXM2 1469 aa36.77■■■■□ 3.48
BCKDK-209ENST00000567676 WDR97A6NE52 1622 aa36.72■■■■□ 3.47
BCKDK-209ENST00000567676 CYB5RLQ6IPT4 315 aa36.65■■■■□ 3.46
BCKDK-209ENST00000567676 GRIN2BQ13224 1484 aa36.64■■■■□ 3.46
BCKDK-209ENST00000567676 CHMP7Q8WUX9 453 aaPredicted RBP36.61■■■■□ 3.45
BCKDK-209ENST00000567676 PBRM1Q86U86 1689 aa36.61■■■■□ 3.45
BCKDK-209ENST00000567676 MAGI1Q96QZ7 1491 aaPredicted RBP36.59■■■■□ 3.45
BCKDK-209ENST00000567676 GAPVD1Q14C86 1478 aa36.56■■■■□ 3.44
BCKDK-209ENST00000567676 ARAP1Q96P48 1450 aa36.54■■■■□ 3.44
BCKDK-209ENST00000567676 ABCA10Q8WWZ4 1543 aa36.52■■■■□ 3.44
BCKDK-209ENST00000567676 SYNJ2O15056 1496 aa36.5■■■■□ 3.43
BCKDK-209ENST00000567676 CLASP1Q7Z460 1538 aa36.49■■■■□ 3.43
BCKDK-209ENST00000567676 ABCA5Q8WWZ7 1642 aa36.49■■■■□ 3.43
BCKDK-209ENST00000567676 SYNJ1O43426 1573 aa36.48■■■■□ 3.43
BCKDK-209ENST00000567676 BIVM-ERCC5R4GMW8 1640 aa36.42■■■■□ 3.42
BCKDK-209ENST00000567676 WRNQ14191 1432 aaPredicted RBP eCLIP36.41■■■■□ 3.42
BCKDK-209ENST00000567676 TOP2BQ02880 1626 aa36.41■■■■□ 3.42
BCKDK-209ENST00000567676 ADAMTS12P58397 1594 aa36.21■■■■□ 3.39
BCKDK-209ENST00000567676 TRHP20396 242 aaPredicted RBP36.2■■■■□ 3.39
BCKDK-209ENST00000567676 GRIN2AQ12879 1464 aa36.18■■■■□ 3.38
BCKDK-209ENST00000567676 CEP170Q5SW79 1584 aa36.1■■■■□ 3.37
BCKDK-209ENST00000567676 FHAD1B1AJZ9 1412 aa36.07■■■■□ 3.36
BCKDK-209ENST00000567676 ERCC6L2Q5T890 1561 aa36.06■■■■□ 3.36
BCKDK-209ENST00000567676 ERICH3Q5RHP9 1530 aa36.05■■■■□ 3.36
BCKDK-209ENST00000567676 NUP160Q12769 1436 aa36.03■■■■□ 3.36
BCKDK-209ENST00000567676 SHROOM2Q13796 1616 aa35.88■■■■□ 3.33
BCKDK-209ENST00000567676 PRG4Q92954 1404 aaPredicted RBP35.74■■■■□ 3.31
BCKDK-209ENST00000567676 JPH4Q96JJ6 628 aa35.71■■■■□ 3.31
BCKDK-209ENST00000567676 RUSC2Q8N2Y8 1516 aa35.69■■■■□ 3.3
BCKDK-209ENST00000567676 IGF1RP08069 1367 aa35.69■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms