RNA–Protein interactions for RNA: ENST00000567617.1

C15orf39-207, Transcript of chromosome 15 open reading frame 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C15orf39, Length 4,249 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C15orf39-207ENST00000567617 NISCHQ9Y2I1 1504 aa22.56■■□□□ 1.2
C15orf39-207ENST00000567617 SUPT5HO00267 1087 aaKnown RBP21.9■■□□□ 1.1
C15orf39-207ENST00000567617 PELP1Q8IZL8 1130 aaKnown RBP21.67■■□□□ 1.06
C15orf39-207ENST00000567617 PCGF6Q9BYE7 350 aa21.58■■□□□ 1.04
C15orf39-207ENST00000567617 SHROOM4Q9ULL8 1493 aa21.49■■□□□ 1.03
C15orf39-207ENST00000567617 DCAF8L2P0C7V8 631 aa21.45■■□□□ 1.02
C15orf39-207ENST00000567617 HRCP23327 699 aa21.4■■□□□ 1.02
C15orf39-207ENST00000567617 MYT1Q01538 1121 aa21.16■□□□□ 0.98
C15orf39-207ENST00000567617 ZEB1P37275 1124 aaPredicted RBP20.99■□□□□ 0.95
C15orf39-207ENST00000567617 PPARGC1BQ86YN6 1023 aaKnown RBP20.93■□□□□ 0.94
C15orf39-207ENST00000567617 CENPBP07199 599 aaPredicted RBP20.83■□□□□ 0.92
C15orf39-207ENST00000567617 EHMT2Q96KQ7 1210 aa20.7■□□□□ 0.91
C15orf39-207ENST00000567617 TRIM26Q12899 539 aaPredicted RBP20.65■□□□□ 0.9
C15orf39-207ENST00000567617 CHIC1Q5VXU3 224 aa20.55■□□□□ 0.88
C15orf39-207ENST00000567617 FAM9AQ8IZU1 332 aaPredicted RBP20.48■□□□□ 0.87
C15orf39-207ENST00000567617 CCER1Q8TC90 406 aaPredicted RBP20.46■□□□□ 0.87
C15orf39-207ENST00000567617 LOC105371045A0A1W2PR82 267 aa20.37■□□□□ 0.85
C15orf39-207ENST00000567617 YTHDC1Q96MU7 727 aaKnown RBP20.26■□□□□ 0.83
C15orf39-207ENST00000567617 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
C15orf39-207ENST00000567617 TTBK1Q5TCY1 1321 aaPredicted RBP20.19■□□□□ 0.82
C15orf39-207ENST00000567617 GTF3C3Q9Y5Q9 886 aa20.11■□□□□ 0.81
C15orf39-207ENST00000567617 SCAF1Q9H7N4 1312 aaKnown RBP20.03■□□□□ 0.8
C15orf39-207ENST00000567617 ACIN1Q9UKV3 1341 aaKnown RBP20.03■□□□□ 0.8
C15orf39-207ENST00000567617 DIEXFQ68CQ4 756 aaKnown RBP20.01■□□□□ 0.79
C15orf39-207ENST00000567617 APLP2Q06481 763 aa19.91■□□□□ 0.78
C15orf39-207ENST00000567617 ERICH6Q7L0X2 663 aa19.9■□□□□ 0.78
C15orf39-207ENST00000567617 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.88■□□□□ 0.77
C15orf39-207ENST00000567617 DCAF1Q9Y4B6 1507 aa19.79■□□□□ 0.76
C15orf39-207ENST00000567617 NEUROD1Q13562 356 aa19.74■□□□□ 0.75
C15orf39-207ENST00000567617 NEFLP07196 543 aa19.7■□□□□ 0.74
C15orf39-207ENST00000567617 MYO15BQ96JP2 1530 aa19.64■□□□□ 0.73
C15orf39-207ENST00000567617 UBTFP17480 764 aaKnown RBP19.58■□□□□ 0.72
C15orf39-207ENST00000567617 ZNF316A6NFI3 1004 aaPredicted RBP19.5■□□□□ 0.71
C15orf39-207ENST00000567617 HNRNPUL2Q1KMD3 747 aaKnown RBP19.42■□□□□ 0.7
C15orf39-207ENST00000567617 RANGAP1P46060 587 aaPredicted RBP19.4■□□□□ 0.7
C15orf39-207ENST00000567617 CCDC180Q9P1Z9 1646 aa19.28■□□□□ 0.68
C15orf39-207ENST00000567617 BCANQ96GW7 911 aa19.26■□□□□ 0.67
C15orf39-207ENST00000567617 CLSPNQ9HAW4 1339 aa19.19■□□□□ 0.66
C15orf39-207ENST00000567617 MIER1Q8N108 512 aa19.09■□□□□ 0.65
C15orf39-207ENST00000567617 ANP32EQ9BTT0 268 aa19.05■□□□□ 0.64
C15orf39-207ENST00000567617 ITGAEP38570 1179 aa19■□□□□ 0.63
C15orf39-207ENST00000567617 RTL5Q5HYW3 569 aaPredicted RBP18.97■□□□□ 0.63
C15orf39-207ENST00000567617 ZCCHC6Q5VYS8 1495 aaKnown RBP18.95■□□□□ 0.62
C15orf39-207ENST00000567617 CDK11AQ9UQ88 783 aaPredicted RBP18.94■□□□□ 0.62
C15orf39-207ENST00000567617 BCL11AQ9H165 835 aa18.93■□□□□ 0.62
C15orf39-207ENST00000567617 FKBP8Q14318 412 aa18.92■□□□□ 0.62
C15orf39-207ENST00000567617 ATP1B4Q9UN42 357 aaPredicted RBP18.86■□□□□ 0.61
C15orf39-207ENST00000567617 ANP32CO43423 234 aa18.77■□□□□ 0.6
C15orf39-207ENST00000567617 SUPT16HQ9Y5B9 1047 aaKnown RBP18.76■□□□□ 0.59
C15orf39-207ENST00000567617 MYT1LQ9UL68 1186 aa18.74■□□□□ 0.59
C15orf39-207ENST00000567617 DAXXQ9UER7 740 aaPredicted RBP18.71■□□□□ 0.59
C15orf39-207ENST00000567617 CSRNP3Q8WYN3 585 aa18.67■□□□□ 0.58
C15orf39-207ENST00000567617 DDX10Q13206 875 aaKnown RBP18.57■□□□□ 0.56
C15orf39-207ENST00000567617 TSHZ2Q9NRE2 1034 aa18.57■□□□□ 0.56
C15orf39-207ENST00000567617 ABCC9O60706 1549 aa18.56■□□□□ 0.56
C15orf39-207ENST00000567617 TRIM52Q96A61 297 aa18.55■□□□□ 0.56
C15orf39-207ENST00000567617 ANP32AP39687 249 aaKnown RBP18.53■□□□□ 0.56
C15orf39-207ENST00000567617 CNGB1Q14028 1251 aaPredicted RBP18.53■□□□□ 0.56
C15orf39-207ENST00000567617 NBR1Q14596 966 aa18.5■□□□□ 0.55
C15orf39-207ENST00000567617 POLR3GLQ9BT43 218 aa18.5■□□□□ 0.55
C15orf39-207ENST00000567617 FAM50AQ14320 339 aaKnown RBP18.48■□□□□ 0.55
C15orf39-207ENST00000567617 HNRNPUQ00839 825 aaKnown RBP eCLIP18.45■□□□□ 0.54
C15orf39-207ENST00000567617 RBM19Q9Y4C8 960 aaKnown RBP18.44■□□□□ 0.54
C15orf39-207ENST00000567617 EIF5BO60841 1220 aaKnown RBP18.44■□□□□ 0.54
C15orf39-207ENST00000567617 CEP162Q5TB80 1403 aa18.41■□□□□ 0.54
C15orf39-207ENST00000567617 IRX6P78412 446 aaPredicted RBP18.38■□□□□ 0.53
C15orf39-207ENST00000567617 RSF1Q96T23 1441 aaPredicted RBP18.37■□□□□ 0.53
C15orf39-207ENST00000567617 ZBTB47Q9UFB7 747 aaPredicted RBP18.34■□□□□ 0.53
C15orf39-207ENST00000567617 NPM2Q86SE8 214 aaKnown RBP18.32■□□□□ 0.52
C15orf39-207ENST00000567617 DEKP35659 375 aaKnown RBP18.26■□□□□ 0.51
C15orf39-207ENST00000567617 TNIKQ9UKE5 1360 aa18.25■□□□□ 0.51
C15orf39-207ENST00000567617 HIRIP3Q9BW71 556 aaPredicted RBP18.22■□□□□ 0.51
C15orf39-207ENST00000567617 FAM9BQ8IZU0 186 aa18.2■□□□□ 0.5
C15orf39-207ENST00000567617 CCDC136Q96JN2 1154 aa18.2■□□□□ 0.5
C15orf39-207ENST00000567617 CLIP1P30622 1438 aa18.2■□□□□ 0.5
C15orf39-207ENST00000567617 SCRIBQ14160 1630 aa18.18■□□□□ 0.5
C15orf39-207ENST00000567617 TONSLQ96HA7 1378 aa18.17■□□□□ 0.5
C15orf39-207ENST00000567617 NOP58Q9Y2X3 529 aaKnown RBP18.15■□□□□ 0.5
C15orf39-207ENST00000567617 EEA1Q15075 1411 aa18.13■□□□□ 0.49
C15orf39-207ENST00000567617 RTN4Q9NQC3 1192 aaKnown RBP18.12■□□□□ 0.49
C15orf39-207ENST00000567617 PPP4R2Q9NY27 417 aa18.12■□□□□ 0.49
C15orf39-207ENST00000567617 GOLGA3Q08378 1498 aa18.11■□□□□ 0.49
C15orf39-207ENST00000567617 GLIPR1L2Q4G1C9 344 aa18.1■□□□□ 0.49
C15orf39-207ENST00000567617 RB1CC1Q8TDY2 1594 aa18.09■□□□□ 0.49
C15orf39-207ENST00000567617 MRS2Q9HD23 443 aa18.06■□□□□ 0.48
C15orf39-207ENST00000567617 PABPN1Q86U42 306 aaKnown RBP eCLIP18.04■□□□□ 0.48
C15orf39-207ENST00000567617 CCER2I3L3R5 266 aa18.02■□□□□ 0.48
C15orf39-207ENST00000567617 B4GALNT3Q6L9W6 998 aa18.01■□□□□ 0.47
C15orf39-207ENST00000567617 KCNH8Q96L42 1107 aa17.99■□□□□ 0.47
C15orf39-207ENST00000567617 WRNQ14191 1432 aaPredicted RBP eCLIP17.97■□□□□ 0.47
C15orf39-207ENST00000567617 ZNF326Q5BKZ1 582 aaKnown RBP17.97■□□□□ 0.47
C15orf39-207ENST00000567617 NEFMP07197 916 aa17.95■□□□□ 0.46
C15orf39-207ENST00000567617 SIN3AQ96ST3 1273 aa17.94■□□□□ 0.46
C15orf39-207ENST00000567617 P3H3Q8IVL6 736 aa17.93■□□□□ 0.46
C15orf39-207ENST00000567617 FANCIQ9NVI1 1328 aa17.92■□□□□ 0.46
C15orf39-207ENST00000567617 PPM1GO15355 546 aaPredicted RBP17.92■□□□□ 0.46
C15orf39-207ENST00000567617 ERICH6BQ5W0A0 696 aa17.91■□□□□ 0.46
C15orf39-207ENST00000567617 LAS1LQ9Y4W2 734 aaKnown RBP17.91■□□□□ 0.46
C15orf39-207ENST00000567617 SOGA1O94964 1423 aa17.91■□□□□ 0.46
C15orf39-207ENST00000567617 CEP164Q9UPV0 1460 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms