RNA–Protein interactions for RNA: ENST00000567510.1

FANCA-224, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-224ENST00000567510 NISCHQ9Y2I1 1504 aa15.86■□□□□ 0.13
FANCA-224ENST00000567510 CCDC180Q9P1Z9 1646 aa14.12□□□□□ -0.15
FANCA-224ENST00000567510 ABCC9O60706 1549 aa13.64□□□□□ -0.23
FANCA-224ENST00000567510 DCAF8L2P0C7V8 631 aa13.3□□□□□ -0.28
FANCA-224ENST00000567510 ZCCHC6Q5VYS8 1495 aaKnown RBP13.23□□□□□ -0.29
FANCA-224ENST00000567510 RB1CC1Q8TDY2 1594 aa13.23□□□□□ -0.29
FANCA-224ENST00000567510 NACADO15069 1562 aa13.22□□□□□ -0.29
FANCA-224ENST00000567510 MYO15BQ96JP2 1530 aa13.13□□□□□ -0.31
FANCA-224ENST00000567510 DCAF1Q9Y4B6 1507 aa13.13□□□□□ -0.31
FANCA-224ENST00000567510 UNC13AQ9UPW8 1703 aa12.91□□□□□ -0.34
FANCA-224ENST00000567510 SCRIBQ14160 1630 aa12.88□□□□□ -0.35
FANCA-224ENST00000567510 PABPN1Q86U42 306 aaKnown RBP eCLIP12.75□□□□□ -0.372e-7■■■■□ 19.3
FANCA-224ENST00000567510 BICRAQ9NZM4 1560 aa12.71□□□□□ -0.37
FANCA-224ENST00000567510 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
FANCA-224ENST00000567510 DNAJC5BQ9UF47 199 aa12.51□□□□□ -0.41
FANCA-224ENST00000567510 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
FANCA-224ENST00000567510 CC2D2AQ9P2K1 1620 aa12.35□□□□□ -0.43
FANCA-224ENST00000567510 BAZ1AQ9NRL2 1556 aaPredicted RBP12.34□□□□□ -0.43
FANCA-224ENST00000567510 SMARCA4P51532 1647 aa12.31□□□□□ -0.44
FANCA-224ENST00000567510 CECR2Q9BXF3 1484 aa12.3□□□□□ -0.44
FANCA-224ENST00000567510 SMARCA2P51531 1590 aa12.23□□□□□ -0.45
FANCA-224ENST00000567510 MROH2BQ7Z745 1585 aa12.21□□□□□ -0.46
FANCA-224ENST00000567510 ATAD2BQ9ULI0 1458 aa12.17□□□□□ -0.46
FANCA-224ENST00000567510 PEG3Q9GZU2 1588 aa12.15□□□□□ -0.46
FANCA-224ENST00000567510 BAZ1BQ9UIG0 1483 aaKnown RBP12.14□□□□□ -0.47
FANCA-224ENST00000567510 NCAPD3P42695 1498 aa12.14□□□□□ -0.47
FANCA-224ENST00000567510 HMGXB3Q12766 1538 aa12.13□□□□□ -0.47
FANCA-224ENST00000567510 WIZO95785 1651 aa12.13□□□□□ -0.47
FANCA-224ENST00000567510 RSF1Q96T23 1441 aaPredicted RBP12.11□□□□□ -0.47
FANCA-224ENST00000567510 TOP2AP11388 1531 aaKnown RBP12.01□□□□□ -0.49
FANCA-224ENST00000567510 SUPT5HO00267 1087 aaKnown RBP11.99□□□□□ -0.49
FANCA-224ENST00000567510 LAMC3Q9Y6N6 1575 aa11.87□□□□□ -0.51
FANCA-224ENST00000567510 CCDC88BA6NC98 1476 aa11.83□□□□□ -0.52
FANCA-224ENST00000567510 ERCC6Q03468 1493 aa11.82□□□□□ -0.52
FANCA-224ENST00000567510 CADPSQ9ULU8 1353 aa11.81□□□□□ -0.52
FANCA-224ENST00000567510 NESP48681 1621 aa11.81□□□□□ -0.52
FANCA-224ENST00000567510 PRDM2Q13029 1718 aa11.8□□□□□ -0.52
FANCA-224ENST00000567510 PDS5BQ9NTI5 1447 aa11.78□□□□□ -0.52
FANCA-224ENST00000567510 CFTRP13569 1480 aa11.76□□□□□ -0.53
FANCA-224ENST00000567510 KIF21AQ7Z4S6 1674 aa11.74□□□□□ -0.53
FANCA-224ENST00000567510 FANCD2Q9BXW9 1451 aa11.7□□□□□ -0.54
FANCA-224ENST00000567510 CEP164Q9UPV0 1460 aa11.7□□□□□ -0.54
FANCA-224ENST00000567510 MRC2Q9UBG0 1479 aa11.63□□□□□ -0.55
FANCA-224ENST00000567510 THOC2Q8NI27 1593 aaKnown RBP11.62□□□□□ -0.55
FANCA-224ENST00000567510 CUX2O14529 1486 aa11.59□□□□□ -0.55
FANCA-224ENST00000567510 ABCC8Q09428 1581 aa11.58□□□□□ -0.56
FANCA-224ENST00000567510 WDR62O43379 1518 aa11.57□□□□□ -0.56
FANCA-224ENST00000567510 DNMBPQ6XZF7 1577 aa11.54□□□□□ -0.56
FANCA-224ENST00000567510 DNAJC5Q9H3Z4 198 aa11.53□□□□□ -0.56
FANCA-224ENST00000567510 URB2Q14146 1524 aaKnown RBP11.53□□□□□ -0.56
FANCA-224ENST00000567510 TOPBP1Q92547 1522 aa11.51□□□□□ -0.57
FANCA-224ENST00000567510 WRNQ14191 1432 aaPredicted RBP eCLIP11.48□□□□□ -0.57
FANCA-224ENST00000567510 CUX1P39880 1505 aa11.45□□□□□ -0.58
FANCA-224ENST00000567510 TOP2BQ02880 1626 aa11.43□□□□□ -0.58
FANCA-224ENST00000567510 BIVM-ERCC5R4GMW8 1640 aa11.43□□□□□ -0.58
FANCA-224ENST00000567510 FGD5Q6ZNL6 1462 aa11.43□□□□□ -0.58
FANCA-224ENST00000567510 IFT140Q96RY7 1462 aa11.43□□□□□ -0.58
FANCA-224ENST00000567510 POLA1P09884 1462 aaPredicted RBP11.42□□□□□ -0.58
FANCA-224ENST00000567510 SYNJ1O43426 1573 aa11.41□□□□□ -0.58
FANCA-224ENST00000567510 SOGA1O94964 1423 aa11.4□□□□□ -0.58
FANCA-224ENST00000567510 TARBP1Q13395 1621 aaKnown RBP11.36□□□□□ -0.59
FANCA-224ENST00000567510 RAD54L2Q9Y4B4 1467 aa11.36□□□□□ -0.59
FANCA-224ENST00000567510 WDR97A6NE52 1622 aa11.35□□□□□ -0.59
FANCA-224ENST00000567510 TRIM41Q8WV44 630 aa11.34□□□□□ -0.59
FANCA-224ENST00000567510 EIF4G3O43432 1585 aaKnown RBP11.33□□□□□ -0.6
FANCA-224ENST00000567510 ABCA10Q8WWZ4 1543 aa11.31□□□□□ -0.6
FANCA-224ENST00000567510 ZNF608Q9ULD9 1512 aaPredicted RBP11.31□□□□□ -0.6
FANCA-224ENST00000567510 TDRD9Q8NDG6 1382 aaKnown RBP11.29□□□□□ -0.6
FANCA-224ENST00000567510 PBRM1Q86U86 1689 aa11.29□□□□□ -0.6
FANCA-224ENST00000567510 AQRO60306 1485 aaKnown RBP eCLIP11.28□□□□□ -0.68e-9■■■■□ 23.8
FANCA-224ENST00000567510 GAPVD1Q14C86 1478 aa11.28□□□□□ -0.6
FANCA-224ENST00000567510 ABCA5Q8WWZ7 1642 aa11.26□□□□□ -0.61
FANCA-224ENST00000567510 GRIN2BQ13224 1484 aa11.25□□□□□ -0.61
FANCA-224ENST00000567510 KIF27Q86VH2 1401 aa11.25□□□□□ -0.61
FANCA-224ENST00000567510 MAGI1Q96QZ7 1491 aaPredicted RBP11.22□□□□□ -0.61
FANCA-224ENST00000567510 SNAPC4Q5SXM2 1469 aa11.21□□□□□ -0.61
FANCA-224ENST00000567510 FBLN2P98095 1184 aa11.21□□□□□ -0.61
FANCA-224ENST00000567510 ERICH3Q5RHP9 1530 aa11.2□□□□□ -0.62
FANCA-224ENST00000567510 CHIC1Q5VXU3 224 aa11.2□□□□□ -0.62
FANCA-224ENST00000567510 CHD1O14646 1710 aa11.2□□□□□ -0.62
FANCA-224ENST00000567510 CHMP7Q8WUX9 453 aaPredicted RBP11.19□□□□□ -0.62
FANCA-224ENST00000567510 CUL7Q14999 1698 aa11.17□□□□□ -0.62
FANCA-224ENST00000567510 SYNJ2O15056 1496 aa11.17□□□□□ -0.62
FANCA-224ENST00000567510 ADAMTS12P58397 1594 aa11.16□□□□□ -0.62
FANCA-224ENST00000567510 OSCARQ8IYS5 282 aa11.15□□□□□ -0.62
FANCA-224ENST00000567510 FHAD1B1AJZ9 1412 aa11.14□□□□□ -0.63
FANCA-224ENST00000567510 EEA1Q15075 1411 aa11.13□□□□□ -0.63
FANCA-224ENST00000567510 IGF1RP08069 1367 aa11.1□□□□□ -0.63
FANCA-224ENST00000567510 GRIN2AQ12879 1464 aa11.1□□□□□ -0.63
FANCA-224ENST00000567510 RUSC2Q8N2Y8 1516 aa11.09□□□□□ -0.63
FANCA-224ENST00000567510 CARMIL1Q5VZK9 1371 aa11.09□□□□□ -0.63
FANCA-224ENST00000567510 FAM9AQ8IZU1 332 aaPredicted RBP11.09□□□□□ -0.63
FANCA-224ENST00000567510 CSRNP3Q8WYN3 585 aa11.07□□□□□ -0.64
FANCA-224ENST00000567510 RAPGEF2Q9Y4G8 1499 aa11.06□□□□□ -0.64
FANCA-224ENST00000567510 CEP170Q5SW79 1584 aa11.03□□□□□ -0.64
FANCA-224ENST00000567510 NUP160Q12769 1436 aa11.01□□□□□ -0.65
FANCA-224ENST00000567510 CLASP1Q7Z460 1538 aa11.01□□□□□ -0.65
FANCA-224ENST00000567510 CTTNBP2Q8WZ74 1663 aa11.01□□□□□ -0.65
FANCA-224ENST00000567510 KIF21BO75037 1637 aa10.99□□□□□ -0.65
FANCA-224ENST00000567510 PRXQ9BXM0 1461 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms