RNA–Protein interactions for RNA: ENST00000567074.5

UBE2I-215, Transcript of ubiquitin conjugating enzyme E2 I, humanhuman

TSL 1 (best)

Gene UBE2I, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2I-215ENST00000567074 NISCHQ9Y2I1 1504 aa47.63■■■■■ 5.22
UBE2I-215ENST00000567074 CCDC180Q9P1Z9 1646 aa42.82■■■■■ 4.44
UBE2I-215ENST00000567074 ABCC9O60706 1549 aa42.54■■■■■ 4.4
UBE2I-215ENST00000567074 RB1CC1Q8TDY2 1594 aa40.66■■■■■ 4.1
UBE2I-215ENST00000567074 NACADO15069 1562 aa40.42■■■■■ 4.06
UBE2I-215ENST00000567074 DCAF8L2P0C7V8 631 aa40■■■■□ 3.99
UBE2I-215ENST00000567074 MYO15BQ96JP2 1530 aa39.95■■■■□ 3.99
UBE2I-215ENST00000567074 DNAJC5BQ9UF47 199 aa39.75■■■■□ 3.95
UBE2I-215ENST00000567074 UNC13AQ9UPW8 1703 aa39.74■■■■□ 3.95
UBE2I-215ENST00000567074 PABPN1Q86U42 306 aaKnown RBP eCLIP39.55■■■■□ 3.92
UBE2I-215ENST00000567074 ZCCHC6Q5VYS8 1495 aaKnown RBP39.51■■■■□ 3.92
UBE2I-215ENST00000567074 DCAF1Q9Y4B6 1507 aa39.45■■■■□ 3.91
UBE2I-215ENST00000567074 BICRAQ9NZM4 1560 aa39.41■■■■□ 3.9
UBE2I-215ENST00000567074 SHROOM4Q9ULL8 1493 aa39.05■■■■□ 3.84
UBE2I-215ENST00000567074 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
UBE2I-215ENST00000567074 CC2D2AQ9P2K1 1620 aa38.51■■■■□ 3.76
UBE2I-215ENST00000567074 EIF4G1Q04637 1599 aaKnown RBP38.46■■■■□ 3.75
UBE2I-215ENST00000567074 CECR2Q9BXF3 1484 aa38.36■■■■□ 3.73
UBE2I-215ENST00000567074 NCAPD3P42695 1498 aa37.27■■■■□ 3.56
UBE2I-215ENST00000567074 SMARCA4P51532 1647 aa37.15■■■■□ 3.54
UBE2I-215ENST00000567074 ATAD2BQ9ULI0 1458 aa37.14■■■■□ 3.54
UBE2I-215ENST00000567074 SMARCA2P51531 1590 aa37.11■■■■□ 3.53
UBE2I-215ENST00000567074 HMGXB3Q12766 1538 aa37.05■■■■□ 3.52
UBE2I-215ENST00000567074 BAZ1AQ9NRL2 1556 aaPredicted RBP37.01■■■■□ 3.52
UBE2I-215ENST00000567074 PEG3Q9GZU2 1588 aa36.85■■■■□ 3.49
UBE2I-215ENST00000567074 BAZ1BQ9UIG0 1483 aaKnown RBP36.8■■■■□ 3.48
UBE2I-215ENST00000567074 ERCC6Q03468 1493 aa36.78■■■■□ 3.48
UBE2I-215ENST00000567074 CUX2O14529 1486 aa36.76■■■■□ 3.48
UBE2I-215ENST00000567074 MROH2BQ7Z745 1585 aa36.65■■■■□ 3.46
UBE2I-215ENST00000567074 NESP48681 1621 aa36.56■■■■□ 3.44
UBE2I-215ENST00000567074 DNAJC5Q9H3Z4 198 aa36.55■■■■□ 3.44
UBE2I-215ENST00000567074 LAMC3Q9Y6N6 1575 aa36.46■■■■□ 3.43
UBE2I-215ENST00000567074 THOC2Q8NI27 1593 aaKnown RBP36.27■■■■□ 3.4
UBE2I-215ENST00000567074 WIZO95785 1651 aa36.23■■■■□ 3.39
UBE2I-215ENST00000567074 PDS5BQ9NTI5 1447 aa36.21■■■■□ 3.39
UBE2I-215ENST00000567074 KIF21AQ7Z4S6 1674 aa36.18■■■■□ 3.38
UBE2I-215ENST00000567074 CADPSQ9ULU8 1353 aa36.12■■■■□ 3.37
UBE2I-215ENST00000567074 RSF1Q96T23 1441 aaPredicted RBP35.92■■■■□ 3.34
UBE2I-215ENST00000567074 MRC2Q9UBG0 1479 aa35.88■■■■□ 3.33
UBE2I-215ENST00000567074 TOP2AP11388 1531 aaKnown RBP35.83■■■■□ 3.33
UBE2I-215ENST00000567074 WDR62O43379 1518 aa35.82■■■■□ 3.32
UBE2I-215ENST00000567074 CEP164Q9UPV0 1460 aa35.76■■■■□ 3.32
UBE2I-215ENST00000567074 CFTRP13569 1480 aa35.74■■■■□ 3.31
UBE2I-215ENST00000567074 FANCD2Q9BXW9 1451 aa35.7■■■■□ 3.31
UBE2I-215ENST00000567074 PRDM2Q13029 1718 aa35.51■■■■□ 3.27
UBE2I-215ENST00000567074 URB2Q14146 1524 aaKnown RBP35.38■■■■□ 3.25
UBE2I-215ENST00000567074 CCDC88BA6NC98 1476 aa35.35■■■■□ 3.25
UBE2I-215ENST00000567074 ABCC8Q09428 1581 aa35.06■■■■□ 3.2
UBE2I-215ENST00000567074 IFT140Q96RY7 1462 aa35.05■■■■□ 3.2
UBE2I-215ENST00000567074 TOPBP1Q92547 1522 aa35.04■■■■□ 3.2
UBE2I-215ENST00000567074 OSCARQ8IYS5 282 aa35.02■■■■□ 3.2
UBE2I-215ENST00000567074 DNMBPQ6XZF7 1577 aa34.96■■■■□ 3.19
UBE2I-215ENST00000567074 ZNF608Q9ULD9 1512 aaPredicted RBP34.9■■■■□ 3.18
UBE2I-215ENST00000567074 TRIM41Q8WV44 630 aa34.89■■■■□ 3.18
UBE2I-215ENST00000567074 EIF4G3O43432 1585 aaKnown RBP34.79■■■■□ 3.16
UBE2I-215ENST00000567074 TARBP1Q13395 1621 aaKnown RBP34.73■■■■□ 3.15
UBE2I-215ENST00000567074 POLA1P09884 1462 aaPredicted RBP34.68■■■■□ 3.14
UBE2I-215ENST00000567074 AQRO60306 1485 aaKnown RBP eCLIP34.58■■■■□ 3.131e-6■■■■□ 23.3
UBE2I-215ENST00000567074 RIMBP3CA6NJZ7 1639 aa34.57■■■■□ 3.12
UBE2I-215ENST00000567074 RIMBP3BA6NNM3 1639 aa34.57■■■■□ 3.12
UBE2I-215ENST00000567074 RIMBP3Q9UFD9 1639 aa34.57■■■■□ 3.12
UBE2I-215ENST00000567074 CHD1O14646 1710 aa34.52■■■■□ 3.12
UBE2I-215ENST00000567074 WDR97A6NE52 1622 aa34.52■■■■□ 3.12
UBE2I-215ENST00000567074 SOGA1O94964 1423 aa34.5■■■■□ 3.11
UBE2I-215ENST00000567074 RAD54L2Q9Y4B4 1467 aa34.49■■■■□ 3.11
UBE2I-215ENST00000567074 ARHGEF11O15085 1522 aa34.48■■■■□ 3.11
UBE2I-215ENST00000567074 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
UBE2I-215ENST00000567074 CUX1P39880 1505 aa34.44■■■■□ 3.1
UBE2I-215ENST00000567074 TDRD9Q8NDG6 1382 aaKnown RBP34.37■■■■□ 3.09
UBE2I-215ENST00000567074 FBLN2P98095 1184 aa34.31■■■■□ 3.08
UBE2I-215ENST00000567074 SNAPC4Q5SXM2 1469 aa34.28■■■■□ 3.08
UBE2I-215ENST00000567074 SUPT5HO00267 1087 aaKnown RBP34.28■■■■□ 3.08
UBE2I-215ENST00000567074 MAGI1Q96QZ7 1491 aaPredicted RBP34.27■■■■□ 3.08
UBE2I-215ENST00000567074 GRIN2BQ13224 1484 aa34.24■■■■□ 3.07
UBE2I-215ENST00000567074 PBRM1Q86U86 1689 aa34.15■■■■□ 3.06
UBE2I-215ENST00000567074 SYNJ1O43426 1573 aa34.15■■■■□ 3.06
UBE2I-215ENST00000567074 CYB5RLQ6IPT4 315 aa34.13■■■■□ 3.05
UBE2I-215ENST00000567074 CHMP7Q8WUX9 453 aaPredicted RBP34.13■■■■□ 3.05
UBE2I-215ENST00000567074 CLASP1Q7Z460 1538 aa34.13■■■■□ 3.05
UBE2I-215ENST00000567074 ABCA10Q8WWZ4 1543 aa34.13■■■■□ 3.05
UBE2I-215ENST00000567074 SYNJ2O15056 1496 aa34.13■■■■□ 3.05
UBE2I-215ENST00000567074 GAPVD1Q14C86 1478 aa34.12■■■■□ 3.05
UBE2I-215ENST00000567074 ARAP1Q96P48 1450 aa34.12■■■■□ 3.05
UBE2I-215ENST00000567074 ABCA5Q8WWZ7 1642 aa34.08■■■■□ 3.05
UBE2I-215ENST00000567074 WRNQ14191 1432 aaPredicted RBP eCLIP33.99■■■■□ 3.03
UBE2I-215ENST00000567074 BIVM-ERCC5R4GMW8 1640 aa33.99■■■■□ 3.03
UBE2I-215ENST00000567074 TOP2BQ02880 1626 aa33.97■■■■□ 3.03
UBE2I-215ENST00000567074 ADAMTS12P58397 1594 aa33.81■■■■□ 3
UBE2I-215ENST00000567074 GRIN2AQ12879 1464 aa33.79■■■■□ 3
UBE2I-215ENST00000567074 ERICH3Q5RHP9 1530 aa33.73■■■□□ 2.99
UBE2I-215ENST00000567074 TRHP20396 242 aaPredicted RBP33.72■■■□□ 2.99
UBE2I-215ENST00000567074 FHAD1B1AJZ9 1412 aa33.7■■■□□ 2.99
UBE2I-215ENST00000567074 NUP160Q12769 1436 aa33.7■■■□□ 2.98
UBE2I-215ENST00000567074 CEP170Q5SW79 1584 aa33.65■■■□□ 2.98
UBE2I-215ENST00000567074 SHROOM2Q13796 1616 aa33.57■■■□□ 2.96
UBE2I-215ENST00000567074 ERCC6L2Q5T890 1561 aa33.51■■■□□ 2.95
UBE2I-215ENST00000567074 RUSC2Q8N2Y8 1516 aa33.33■■■□□ 2.93
UBE2I-215ENST00000567074 PRG4Q92954 1404 aaPredicted RBP33.3■■■□□ 2.92
UBE2I-215ENST00000567074 KIF27Q86VH2 1401 aa33.29■■■□□ 2.92
UBE2I-215ENST00000567074 JPH4Q96JJ6 628 aa33.29■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms