RNA–Protein interactions for RNA: ENST00000566911.1

LPCAT2-207, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 2

Gene LPCAT2, Length 832 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-207ENST00000566911 NISCHQ9Y2I1 1504 aa51.21■■■■■ 5.79
LPCAT2-207ENST00000566911 CCDC180Q9P1Z9 1646 aa45.81■■■■■ 4.92
LPCAT2-207ENST00000566911 ABCC9O60706 1549 aa45.81■■■■■ 4.92
LPCAT2-207ENST00000566911 RB1CC1Q8TDY2 1594 aa43.63■■■■■ 4.58
LPCAT2-207ENST00000566911 NACADO15069 1562 aa43.37■■■■■ 4.53
LPCAT2-207ENST00000566911 DCAF8L2P0C7V8 631 aa43.34■■■■■ 4.53
LPCAT2-207ENST00000566911 DNAJC5BQ9UF47 199 aa42.97■■■■■ 4.47
LPCAT2-207ENST00000566911 MYO15BQ96JP2 1530 aa42.82■■■■■ 4.45
LPCAT2-207ENST00000566911 PABPN1Q86U42 306 aaKnown RBP eCLIP42.76■■■■■ 4.44
LPCAT2-207ENST00000566911 UNC13AQ9UPW8 1703 aa42.53■■■■■ 4.4
LPCAT2-207ENST00000566911 ZCCHC6Q5VYS8 1495 aaKnown RBP42.42■■■■■ 4.38
LPCAT2-207ENST00000566911 BICRAQ9NZM4 1560 aa42.32■■■■■ 4.37
LPCAT2-207ENST00000566911 DCAF1Q9Y4B6 1507 aa42.3■■■■■ 4.36
LPCAT2-207ENST00000566911 SHROOM4Q9ULL8 1493 aa41.79■■■■■ 4.28
LPCAT2-207ENST00000566911 SCRIBQ14160 1630 aa41.77■■■■■ 4.28
LPCAT2-207ENST00000566911 CC2D2AQ9P2K1 1620 aa41.35■■■■■ 4.21
LPCAT2-207ENST00000566911 EIF4G1Q04637 1599 aaKnown RBP41.29■■■■■ 4.2
LPCAT2-207ENST00000566911 CECR2Q9BXF3 1484 aa41.28■■■■■ 4.2
LPCAT2-207ENST00000566911 NCAPD3P42695 1498 aa40.09■■■■■ 4.01
LPCAT2-207ENST00000566911 ATAD2BQ9ULI0 1458 aa39.95■■■■□ 3.99
LPCAT2-207ENST00000566911 SMARCA4P51532 1647 aa39.87■■■■□ 3.97
LPCAT2-207ENST00000566911 SMARCA2P51531 1590 aa39.82■■■■□ 3.97
LPCAT2-207ENST00000566911 BAZ1AQ9NRL2 1556 aaPredicted RBP39.72■■■■□ 3.95
LPCAT2-207ENST00000566911 HMGXB3Q12766 1538 aa39.71■■■■□ 3.95
LPCAT2-207ENST00000566911 ERCC6Q03468 1493 aa39.56■■■■□ 3.92
LPCAT2-207ENST00000566911 BAZ1BQ9UIG0 1483 aaKnown RBP39.56■■■■□ 3.92
LPCAT2-207ENST00000566911 PEG3Q9GZU2 1588 aa39.5■■■■□ 3.91
LPCAT2-207ENST00000566911 CUX2O14529 1486 aa39.44■■■■□ 3.9
LPCAT2-207ENST00000566911 MROH2BQ7Z745 1585 aa39.44■■■■□ 3.9
LPCAT2-207ENST00000566911 DNAJC5Q9H3Z4 198 aa39.42■■■■□ 3.9
LPCAT2-207ENST00000566911 NESP48681 1621 aa39.36■■■■□ 3.89
LPCAT2-207ENST00000566911 LAMC3Q9Y6N6 1575 aa39.1■■■■□ 3.85
LPCAT2-207ENST00000566911 PDS5BQ9NTI5 1447 aa38.96■■■■□ 3.83
LPCAT2-207ENST00000566911 WIZO95785 1651 aa38.94■■■■□ 3.82
LPCAT2-207ENST00000566911 CADPSQ9ULU8 1353 aa38.9■■■■□ 3.82
LPCAT2-207ENST00000566911 THOC2Q8NI27 1593 aaKnown RBP38.87■■■■□ 3.81
LPCAT2-207ENST00000566911 KIF21AQ7Z4S6 1674 aa38.78■■■■□ 3.8
LPCAT2-207ENST00000566911 RSF1Q96T23 1441 aaPredicted RBP38.71■■■■□ 3.79
LPCAT2-207ENST00000566911 MRC2Q9UBG0 1479 aa38.55■■■■□ 3.76
LPCAT2-207ENST00000566911 TOP2AP11388 1531 aaKnown RBP38.47■■■■□ 3.75
LPCAT2-207ENST00000566911 CFTRP13569 1480 aa38.43■■■■□ 3.74
LPCAT2-207ENST00000566911 WDR62O43379 1518 aa38.42■■■■□ 3.74
LPCAT2-207ENST00000566911 CEP164Q9UPV0 1460 aa38.41■■■■□ 3.74
LPCAT2-207ENST00000566911 FANCD2Q9BXW9 1451 aa38.4■■■■□ 3.74
LPCAT2-207ENST00000566911 CCDC88BA6NC98 1476 aa38.09■■■■□ 3.69
LPCAT2-207ENST00000566911 URB2Q14146 1524 aaKnown RBP38.05■■■■□ 3.68
LPCAT2-207ENST00000566911 PRDM2Q13029 1718 aa37.9■■■■□ 3.66
LPCAT2-207ENST00000566911 OSCARQ8IYS5 282 aa37.8■■■■□ 3.64
LPCAT2-207ENST00000566911 TRIM41Q8WV44 630 aa37.71■■■■□ 3.63
LPCAT2-207ENST00000566911 IFT140Q96RY7 1462 aa37.68■■■■□ 3.62
LPCAT2-207ENST00000566911 TOPBP1Q92547 1522 aa37.66■■■■□ 3.62
LPCAT2-207ENST00000566911 ABCC8Q09428 1581 aa37.66■■■■□ 3.62
LPCAT2-207ENST00000566911 ZNF608Q9ULD9 1512 aaPredicted RBP37.57■■■■□ 3.61
LPCAT2-207ENST00000566911 DNMBPQ6XZF7 1577 aa37.51■■■■□ 3.6
LPCAT2-207ENST00000566911 EIF4G3O43432 1585 aaKnown RBP37.3■■■■□ 3.56
LPCAT2-207ENST00000566911 AQRO60306 1485 aaKnown RBP eCLIP37.3■■■■□ 3.56
LPCAT2-207ENST00000566911 POLA1P09884 1462 aaPredicted RBP37.29■■■■□ 3.56
LPCAT2-207ENST00000566911 TARBP1Q13395 1621 aaKnown RBP37.28■■■■□ 3.56
LPCAT2-207ENST00000566911 SOGA1O94964 1423 aa37.19■■■■□ 3.54
LPCAT2-207ENST00000566911 RAD54L2Q9Y4B4 1467 aa37.18■■■■□ 3.54
LPCAT2-207ENST00000566911 SUPT5HO00267 1087 aaKnown RBP37.15■■■■□ 3.54
LPCAT2-207ENST00000566911 RIMBP3CA6NJZ7 1639 aa37.11■■■■□ 3.53
LPCAT2-207ENST00000566911 RIMBP3BA6NNM3 1639 aa37.11■■■■□ 3.53
LPCAT2-207ENST00000566911 RIMBP3Q9UFD9 1639 aa37.11■■■■□ 3.53
LPCAT2-207ENST00000566911 TDRD9Q8NDG6 1382 aaKnown RBP37.1■■■■□ 3.53
LPCAT2-207ENST00000566911 FBLN2P98095 1184 aa37.1■■■■□ 3.53
LPCAT2-207ENST00000566911 FGD5Q6ZNL6 1462 aa37.07■■■■□ 3.52
LPCAT2-207ENST00000566911 CUX1P39880 1505 aa37.04■■■■□ 3.52
LPCAT2-207ENST00000566911 ARHGEF11O15085 1522 aa37.03■■■■□ 3.52
LPCAT2-207ENST00000566911 CHD1O14646 1710 aa36.99■■■■□ 3.51
LPCAT2-207ENST00000566911 WDR97A6NE52 1622 aa36.92■■■■□ 3.5
LPCAT2-207ENST00000566911 CYB5RLQ6IPT4 315 aa36.89■■■■□ 3.5
LPCAT2-207ENST00000566911 SNAPC4Q5SXM2 1469 aa36.87■■■■□ 3.49
LPCAT2-207ENST00000566911 CHMP7Q8WUX9 453 aaPredicted RBP36.86■■■■□ 3.49
LPCAT2-207ENST00000566911 GRIN2BQ13224 1484 aa36.82■■■■□ 3.49
LPCAT2-207ENST00000566911 MAGI1Q96QZ7 1491 aaPredicted RBP36.8■■■■□ 3.48
LPCAT2-207ENST00000566911 GAPVD1Q14C86 1478 aa36.71■■■■□ 3.47
LPCAT2-207ENST00000566911 ABCA10Q8WWZ4 1543 aa36.67■■■■□ 3.46
LPCAT2-207ENST00000566911 SYNJ2O15056 1496 aa36.67■■■■□ 3.46
LPCAT2-207ENST00000566911 ARAP1Q96P48 1450 aa36.67■■■■□ 3.46
LPCAT2-207ENST00000566911 SYNJ1O43426 1573 aa36.64■■■■□ 3.46
LPCAT2-207ENST00000566911 CLASP1Q7Z460 1538 aa36.61■■■■□ 3.45
LPCAT2-207ENST00000566911 WRNQ14191 1432 aaPredicted RBP eCLIP36.59■■■■□ 3.45
LPCAT2-207ENST00000566911 PBRM1Q86U86 1689 aa36.56■■■■□ 3.44
LPCAT2-207ENST00000566911 ABCA5Q8WWZ7 1642 aa36.53■■■■□ 3.44
LPCAT2-207ENST00000566911 TOP2BQ02880 1626 aa36.46■■■■□ 3.43
LPCAT2-207ENST00000566911 TRHP20396 242 aaPredicted RBP36.45■■■■□ 3.43
LPCAT2-207ENST00000566911 BIVM-ERCC5R4GMW8 1640 aa36.43■■■■□ 3.42
LPCAT2-207ENST00000566911 GRIN2AQ12879 1464 aa36.32■■■■□ 3.41
LPCAT2-207ENST00000566911 FHAD1B1AJZ9 1412 aa36.26■■■■□ 3.4
LPCAT2-207ENST00000566911 ADAMTS12P58397 1594 aa36.25■■■■□ 3.39
LPCAT2-207ENST00000566911 NUP160Q12769 1436 aa36.21■■■■□ 3.39
LPCAT2-207ENST00000566911 ERICH3Q5RHP9 1530 aa36.2■■■■□ 3.39
LPCAT2-207ENST00000566911 CEP170Q5SW79 1584 aa36.14■■■■□ 3.38
LPCAT2-207ENST00000566911 ERCC6L2Q5T890 1561 aa36.06■■■■□ 3.36
LPCAT2-207ENST00000566911 SHROOM2Q13796 1616 aa35.97■■■■□ 3.35
LPCAT2-207ENST00000566911 JPH4Q96JJ6 628 aa35.96■■■■□ 3.35
LPCAT2-207ENST00000566911 PRG4Q92954 1404 aaPredicted RBP35.89■■■■□ 3.34
LPCAT2-207ENST00000566911 IGF1RP08069 1367 aa35.85■■■■□ 3.33
LPCAT2-207ENST00000566911 KIF27Q86VH2 1401 aa35.84■■■■□ 3.33
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms