RNA–Protein interactions for RNA: ENST00000566784.5

PKD1-231, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 493 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-231ENST00000566784 NISCHQ9Y2I1 1504 aa34.16■■■■□ 3.06
PKD1-231ENST00000566784 CCDC180Q9P1Z9 1646 aa30.56■■■□□ 2.48
PKD1-231ENST00000566784 ABCC9O60706 1549 aa30.01■■■□□ 2.4
PKD1-231ENST00000566784 RB1CC1Q8TDY2 1594 aa28.84■■■□□ 2.21
PKD1-231ENST00000566784 NACADO15069 1562 aa28.75■■■□□ 2.19
PKD1-231ENST00000566784 MYO15BQ96JP2 1530 aa28.53■■■□□ 2.16
PKD1-231ENST00000566784 DCAF8L2P0C7V8 631 aa28.52■■■□□ 2.16
PKD1-231ENST00000566784 ZCCHC6Q5VYS8 1495 aaKnown RBP28.42■■■□□ 2.14
PKD1-231ENST00000566784 DCAF1Q9Y4B6 1507 aa28.3■■■□□ 2.12
PKD1-231ENST00000566784 UNC13AQ9UPW8 1703 aa28.23■■■□□ 2.11
PKD1-231ENST00000566784 BICRAQ9NZM4 1560 aa27.97■■■□□ 2.07
PKD1-231ENST00000566784 PABPN1Q86U42 306 aaKnown RBP eCLIP27.95■■■□□ 2.06
PKD1-231ENST00000566784 SCRIBQ14160 1630 aa27.78■■■□□ 2.04
PKD1-231ENST00000566784 DNAJC5BQ9UF47 199 aa27.74■■■□□ 2.03
PKD1-231ENST00000566784 SHROOM4Q9ULL8 1493 aa27.7■■■□□ 2.02
PKD1-231ENST00000566784 EIF4G1Q04637 1599 aaKnown RBP27.24■■□□□ 1.95
PKD1-231ENST00000566784 CC2D2AQ9P2K1 1620 aa27.19■■□□□ 1.94
PKD1-231ENST00000566784 CECR2Q9BXF3 1484 aa27.02■■□□□ 1.92
PKD1-231ENST00000566784 SMARCA4P51532 1647 aa26.58■■□□□ 1.85
PKD1-231ENST00000566784 BAZ1AQ9NRL2 1556 aaPredicted RBP26.51■■□□□ 1.83
PKD1-231ENST00000566784 NCAPD3P42695 1498 aa26.5■■□□□ 1.83
PKD1-231ENST00000566784 ATAD2BQ9ULI0 1458 aa26.47■■□□□ 1.83
PKD1-231ENST00000566784 SMARCA2P51531 1590 aa26.46■■□□□ 1.83
PKD1-231ENST00000566784 HMGXB3Q12766 1538 aa26.39■■□□□ 1.81
PKD1-231ENST00000566784 PEG3Q9GZU2 1588 aa26.36■■□□□ 1.81
PKD1-231ENST00000566784 MROH2BQ7Z745 1585 aa26.3■■□□□ 1.8
PKD1-231ENST00000566784 BAZ1BQ9UIG0 1483 aaKnown RBP26.24■■□□□ 1.79
PKD1-231ENST00000566784 WIZO95785 1651 aa26.03■■□□□ 1.76
PKD1-231ENST00000566784 NESP48681 1621 aa25.91■■□□□ 1.74
PKD1-231ENST00000566784 RSF1Q96T23 1441 aaPredicted RBP25.9■■□□□ 1.74
PKD1-231ENST00000566784 ERCC6Q03468 1493 aa25.9■■□□□ 1.74
PKD1-231ENST00000566784 LAMC3Q9Y6N6 1575 aa25.87■■□□□ 1.73
PKD1-231ENST00000566784 CUX2O14529 1486 aa25.77■■□□□ 1.72
PKD1-231ENST00000566784 TOP2AP11388 1531 aaKnown RBP25.75■■□□□ 1.71
PKD1-231ENST00000566784 CADPSQ9ULU8 1353 aa25.69■■□□□ 1.7
PKD1-231ENST00000566784 PDS5BQ9NTI5 1447 aa25.67■■□□□ 1.7
PKD1-231ENST00000566784 KIF21AQ7Z4S6 1674 aa25.67■■□□□ 1.7
PKD1-231ENST00000566784 THOC2Q8NI27 1593 aaKnown RBP25.64■■□□□ 1.69
PKD1-231ENST00000566784 CFTRP13569 1480 aa25.52■■□□□ 1.68
PKD1-231ENST00000566784 MRC2Q9UBG0 1479 aa25.43■■□□□ 1.66
PKD1-231ENST00000566784 CCDC88BA6NC98 1476 aa25.41■■□□□ 1.66
PKD1-231ENST00000566784 PRDM2Q13029 1718 aa25.41■■□□□ 1.66
PKD1-231ENST00000566784 FANCD2Q9BXW9 1451 aa25.4■■□□□ 1.66
PKD1-231ENST00000566784 CEP164Q9UPV0 1460 aa25.4■■□□□ 1.66
PKD1-231ENST00000566784 WDR62O43379 1518 aa25.37■■□□□ 1.65
PKD1-231ENST00000566784 DNAJC5Q9H3Z4 198 aa25.21■■□□□ 1.63
PKD1-231ENST00000566784 URB2Q14146 1524 aaKnown RBP25.17■■□□□ 1.62
PKD1-231ENST00000566784 SUPT5HO00267 1087 aaKnown RBP24.99■■□□□ 1.59
PKD1-231ENST00000566784 ABCC8Q09428 1581 aa24.99■■□□□ 1.59
PKD1-231ENST00000566784 TOPBP1Q92547 1522 aa24.98■■□□□ 1.59
PKD1-231ENST00000566784 DNMBPQ6XZF7 1577 aa24.96■■□□□ 1.59
PKD1-231ENST00000566784 IFT140Q96RY7 1462 aa24.89■■□□□ 1.57
PKD1-231ENST00000566784 ZNF608Q9ULD9 1512 aaPredicted RBP24.77■■□□□ 1.56
PKD1-231ENST00000566784 TARBP1Q13395 1621 aaKnown RBP24.76■■□□□ 1.55
PKD1-231ENST00000566784 POLA1P09884 1462 aaPredicted RBP24.75■■□□□ 1.55
PKD1-231ENST00000566784 EIF4G3O43432 1585 aaKnown RBP24.71■■□□□ 1.55
PKD1-231ENST00000566784 CUX1P39880 1505 aa24.7■■□□□ 1.54
PKD1-231ENST00000566784 FGD5Q6ZNL6 1462 aa24.65■■□□□ 1.54
PKD1-231ENST00000566784 SOGA1O94964 1423 aa24.62■■□□□ 1.53
PKD1-231ENST00000566784 RAD54L2Q9Y4B4 1467 aa24.62■■□□□ 1.53
PKD1-231ENST00000566784 OSCARQ8IYS5 282 aa24.6■■□□□ 1.53
PKD1-231ENST00000566784 AQRO60306 1485 aaKnown RBP eCLIP24.59■■□□□ 1.536e-6■■■■□ 25.1
PKD1-231ENST00000566784 WDR97A6NE52 1622 aa24.59■■□□□ 1.53
PKD1-231ENST00000566784 TDRD9Q8NDG6 1382 aaKnown RBP24.49■■□□□ 1.51
PKD1-231ENST00000566784 CHD1O14646 1710 aa24.47■■□□□ 1.51
PKD1-231ENST00000566784 BIVM-ERCC5R4GMW8 1640 aa24.47■■□□□ 1.51
PKD1-231ENST00000566784 TOP2BQ02880 1626 aa24.46■■□□□ 1.51
PKD1-231ENST00000566784 WRNQ14191 1432 aaPredicted RBP eCLIP24.44■■□□□ 1.5
PKD1-231ENST00000566784 ABCA10Q8WWZ4 1543 aa24.42■■□□□ 1.5
PKD1-231ENST00000566784 SYNJ1O43426 1573 aa24.41■■□□□ 1.5
PKD1-231ENST00000566784 GRIN2BQ13224 1484 aa24.39■■□□□ 1.5
PKD1-231ENST00000566784 PBRM1Q86U86 1689 aa24.38■■□□□ 1.49
PKD1-231ENST00000566784 SNAPC4Q5SXM2 1469 aa24.38■■□□□ 1.49
PKD1-231ENST00000566784 ABCA5Q8WWZ7 1642 aa24.37■■□□□ 1.49
PKD1-231ENST00000566784 MAGI1Q96QZ7 1491 aaPredicted RBP24.37■■□□□ 1.49
PKD1-231ENST00000566784 GAPVD1Q14C86 1478 aa24.35■■□□□ 1.49
PKD1-231ENST00000566784 FBLN2P98095 1184 aa24.3■■□□□ 1.48
PKD1-231ENST00000566784 RIMBP3CA6NJZ7 1639 aa24.28■■□□□ 1.48
PKD1-231ENST00000566784 RIMBP3BA6NNM3 1639 aa24.28■■□□□ 1.48
PKD1-231ENST00000566784 RIMBP3Q9UFD9 1639 aa24.28■■□□□ 1.48
PKD1-231ENST00000566784 SYNJ2O15056 1496 aa24.26■■□□□ 1.47
PKD1-231ENST00000566784 ARHGEF11O15085 1522 aa24.24■■□□□ 1.47
PKD1-231ENST00000566784 CHMP7Q8WUX9 453 aaPredicted RBP24.23■■□□□ 1.47
PKD1-231ENST00000566784 TRIM41Q8WV44 630 aa24.22■■□□□ 1.47
PKD1-231ENST00000566784 CLASP1Q7Z460 1538 aa24.18■■□□□ 1.46
PKD1-231ENST00000566784 ERICH3Q5RHP9 1530 aa24.15■■□□□ 1.46
PKD1-231ENST00000566784 ADAMTS12P58397 1594 aa24.14■■□□□ 1.45
PKD1-231ENST00000566784 GRIN2AQ12879 1464 aa24.07■■□□□ 1.44
PKD1-231ENST00000566784 FHAD1B1AJZ9 1412 aa24.07■■□□□ 1.44
PKD1-231ENST00000566784 ARAP1Q96P48 1450 aa24.01■■□□□ 1.43
PKD1-231ENST00000566784 NUP160Q12769 1436 aa23.99■■□□□ 1.43
PKD1-231ENST00000566784 CEP170Q5SW79 1584 aa23.97■■□□□ 1.43
PKD1-231ENST00000566784 CYB5RLQ6IPT4 315 aa23.96■■□□□ 1.43
PKD1-231ENST00000566784 KIF27Q86VH2 1401 aa23.95■■□□□ 1.42
PKD1-231ENST00000566784 CUL7Q14999 1698 aa23.89■■□□□ 1.42
PKD1-231ENST00000566784 SHROOM2Q13796 1616 aa23.88■■□□□ 1.41
PKD1-231ENST00000566784 IGF1RP08069 1367 aa23.87■■□□□ 1.41
PKD1-231ENST00000566784 RUSC2Q8N2Y8 1516 aa23.79■■□□□ 1.4
PKD1-231ENST00000566784 ERCC6L2Q5T890 1561 aa23.78■■□□□ 1.4
PKD1-231ENST00000566784 CARMIL1Q5VZK9 1371 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms