RNA–Protein interactions for RNA: ENST00000566501.5

EIF3C-209, Transcript of eukaryotic translation initiation factor 3 subunit C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3C, Length 3,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3C-209ENST00000566501 NISCHQ9Y2I1 1504 aa22.48■■□□□ 1.19
EIF3C-209ENST00000566501 PELP1Q8IZL8 1130 aaKnown RBP20.38■□□□□ 0.85
EIF3C-209ENST00000566501 HRCP23327 699 aa20.33■□□□□ 0.85
EIF3C-209ENST00000566501 PPARGC1BQ86YN6 1023 aaKnown RBP20.13■□□□□ 0.81
EIF3C-209ENST00000566501 PCGF6Q9BYE7 350 aa19.79■□□□□ 0.76
EIF3C-209ENST00000566501 CCDC180Q9P1Z9 1646 aa19.77■□□□□ 0.76
EIF3C-209ENST00000566501 MYT1Q01538 1121 aa19.7■□□□□ 0.74
EIF3C-209ENST00000566501 SCAF1Q9H7N4 1312 aaKnown RBP19.68■□□□□ 0.74
EIF3C-209ENST00000566501 SHROOM4Q9ULL8 1493 aa19.28■□□□□ 0.68
EIF3C-209ENST00000566501 MYO15BQ96JP2 1530 aa19.27■□□□□ 0.68
EIF3C-209ENST00000566501 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
EIF3C-209ENST00000566501 ZCCHC6Q5VYS8 1495 aaKnown RBP18.94■□□□□ 0.62
EIF3C-209ENST00000566501 ACIN1Q9UKV3 1341 aaKnown RBP18.93■□□□□ 0.62
EIF3C-209ENST00000566501 NEUROD1Q13562 356 aa18.93■□□□□ 0.62
EIF3C-209ENST00000566501 GTF3C3Q9Y5Q9 886 aa18.91■□□□□ 0.62
EIF3C-209ENST00000566501 CHIC1Q5VXU3 224 aa18.87■□□□□ 0.61
EIF3C-209ENST00000566501 TRIM26Q12899 539 aaPredicted RBP18.8■□□□□ 0.6
EIF3C-209ENST00000566501 DCAF1Q9Y4B6 1507 aa18.77■□□□□ 0.6
EIF3C-209ENST00000566501 ZEB1P37275 1124 aaPredicted RBP18.76■□□□□ 0.59
EIF3C-209ENST00000566501 LOC105371045A0A1W2PR82 267 aa18.67■□□□□ 0.58
EIF3C-209ENST00000566501 BCL11AQ9H165 835 aa18.65■□□□□ 0.58
EIF3C-209ENST00000566501 CENPBP07199 599 aaPredicted RBP18.6■□□□□ 0.57
EIF3C-209ENST00000566501 TTBK1Q5TCY1 1321 aaPredicted RBP18.58■□□□□ 0.57
EIF3C-209ENST00000566501 FAM9AQ8IZU1 332 aaPredicted RBP18.52■□□□□ 0.56
EIF3C-209ENST00000566501 PRKCSHP14314 528 aaPredicted RBP18.36■□□□□ 0.53
EIF3C-209ENST00000566501 YTHDC1Q96MU7 727 aaKnown RBP18.34■□□□□ 0.53
EIF3C-209ENST00000566501 DIEXFQ68CQ4 756 aaKnown RBP18.33■□□□□ 0.52
EIF3C-209ENST00000566501 NACADO15069 1562 aa18.29■□□□□ 0.52
EIF3C-209ENST00000566501 DCAF8L2P0C7V8 631 aa18.23■□□□□ 0.51
EIF3C-209ENST00000566501 ABCC9O60706 1549 aa18.21■□□□□ 0.51
EIF3C-209ENST00000566501 ANP32EQ9BTT0 268 aa18.18■□□□□ 0.5
EIF3C-209ENST00000566501 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.15■□□□□ 0.5
EIF3C-209ENST00000566501 CSRNP3Q8WYN3 585 aa18.1■□□□□ 0.49
EIF3C-209ENST00000566501 CCER1Q8TC90 406 aaPredicted RBP18.09■□□□□ 0.49
EIF3C-209ENST00000566501 RB1CC1Q8TDY2 1594 aa18.06■□□□□ 0.48
EIF3C-209ENST00000566501 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
EIF3C-209ENST00000566501 SCRIBQ14160 1630 aa17.89■□□□□ 0.45
EIF3C-209ENST00000566501 TSHZ2Q9NRE2 1034 aa17.87■□□□□ 0.45
EIF3C-209ENST00000566501 UNC13AQ9UPW8 1703 aa17.85■□□□□ 0.45
EIF3C-209ENST00000566501 TRIM41Q8WV44 630 aa17.85■□□□□ 0.45
EIF3C-209ENST00000566501 MIER1Q8N108 512 aa17.83■□□□□ 0.44
EIF3C-209ENST00000566501 SUPT16HQ9Y5B9 1047 aaKnown RBP17.78■□□□□ 0.44
EIF3C-209ENST00000566501 ZNF316A6NFI3 1004 aaPredicted RBP17.76■□□□□ 0.43
EIF3C-209ENST00000566501 ERICH6Q7L0X2 663 aa17.74■□□□□ 0.43
EIF3C-209ENST00000566501 BICRAQ9NZM4 1560 aa17.57■□□□□ 0.4
EIF3C-209ENST00000566501 BCANQ96GW7 911 aa17.56■□□□□ 0.4
EIF3C-209ENST00000566501 APLP2Q06481 763 aa17.53■□□□□ 0.4
EIF3C-209ENST00000566501 ANO8Q9HCE9 1232 aaPredicted RBP17.49■□□□□ 0.39
EIF3C-209ENST00000566501 CLSPNQ9HAW4 1339 aa17.46■□□□□ 0.39
EIF3C-209ENST00000566501 RBM19Q9Y4C8 960 aaKnown RBP17.39■□□□□ 0.37
EIF3C-209ENST00000566501 RSF1Q96T23 1441 aaPredicted RBP17.37■□□□□ 0.37
EIF3C-209ENST00000566501 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
EIF3C-209ENST00000566501 CECR2Q9BXF3 1484 aa17.33■□□□□ 0.36
EIF3C-209ENST00000566501 MSH5O43196 834 aa17.32■□□□□ 0.36
EIF3C-209ENST00000566501 SMARCA4P51532 1647 aa17.3■□□□□ 0.36
EIF3C-209ENST00000566501 MROH2BQ7Z745 1585 aa17.29■□□□□ 0.36
EIF3C-209ENST00000566501 CCDC136Q96JN2 1154 aa17.27■□□□□ 0.35
EIF3C-209ENST00000566501 FKBP8Q14318 412 aa17.26■□□□□ 0.35
EIF3C-209ENST00000566501 ITGAEP38570 1179 aa17.24■□□□□ 0.35
EIF3C-209ENST00000566501 SALL2Q9Y467 1007 aaPredicted RBP17.24■□□□□ 0.35
EIF3C-209ENST00000566501 PEG3Q9GZU2 1588 aa17.23■□□□□ 0.35
EIF3C-209ENST00000566501 DEKP35659 375 aaKnown RBP17.22■□□□□ 0.35
EIF3C-209ENST00000566501 WIZO95785 1651 aa17.19■□□□□ 0.34
EIF3C-209ENST00000566501 HNRNPUL2Q1KMD3 747 aaKnown RBP17.1■□□□□ 0.33
EIF3C-209ENST00000566501 KCNH8Q96L42 1107 aa17.1■□□□□ 0.33
EIF3C-209ENST00000566501 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.08■□□□□ 0.32
EIF3C-209ENST00000566501 TOP2AP11388 1531 aaKnown RBP17.07■□□□□ 0.32
EIF3C-209ENST00000566501 NEFLP07196 543 aa17.05■□□□□ 0.32
EIF3C-209ENST00000566501 PABPN1Q86U42 306 aaKnown RBP eCLIP17.04■□□□□ 0.32
EIF3C-209ENST00000566501 RTN4Q9NQC3 1192 aaKnown RBP17.02■□□□□ 0.32
EIF3C-209ENST00000566501 NBR1Q14596 966 aa16.99■□□□□ 0.31
EIF3C-209ENST00000566501 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
EIF3C-209ENST00000566501 UBE2Q2Q8WVN8 375 aa16.97■□□□□ 0.31
EIF3C-209ENST00000566501 EIF4G1Q04637 1599 aaKnown RBP16.97■□□□□ 0.31
EIF3C-209ENST00000566501 MYT1LQ9UL68 1186 aa16.96■□□□□ 0.31
EIF3C-209ENST00000566501 FANCIQ9NVI1 1328 aa16.95■□□□□ 0.3
EIF3C-209ENST00000566501 ATAD2BQ9ULI0 1458 aa16.92■□□□□ 0.3
EIF3C-209ENST00000566501 IL27Q8NEV9 243 aa16.91■□□□□ 0.3
EIF3C-209ENST00000566501 HMGXB3Q12766 1538 aa16.89■□□□□ 0.29
EIF3C-209ENST00000566501 ERICH6BQ5W0A0 696 aa16.87■□□□□ 0.29
EIF3C-209ENST00000566501 CDK11AQ9UQ88 783 aaPredicted RBP16.85■□□□□ 0.29
EIF3C-209ENST00000566501 TRIM52Q96A61 297 aa16.83■□□□□ 0.28
EIF3C-209ENST00000566501 NCAPD3P42695 1498 aa16.83■□□□□ 0.28
EIF3C-209ENST00000566501 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
EIF3C-209ENST00000566501 IRX6P78412 446 aaPredicted RBP16.82■□□□□ 0.28
EIF3C-209ENST00000566501 CEP162Q5TB80 1403 aa16.8■□□□□ 0.28
EIF3C-209ENST00000566501 CCDC88BA6NC98 1476 aa16.79■□□□□ 0.28
EIF3C-209ENST00000566501 UBTFP17480 764 aaKnown RBP16.79■□□□□ 0.28
EIF3C-209ENST00000566501 BAZ1BQ9UIG0 1483 aaKnown RBP16.77■□□□□ 0.28
EIF3C-209ENST00000566501 EIF5BO60841 1220 aaKnown RBP16.75■□□□□ 0.27
EIF3C-209ENST00000566501 PAK3O75914 559 aaPredicted RBP16.72■□□□□ 0.27
EIF3C-209ENST00000566501 NOP58Q9Y2X3 529 aaKnown RBP16.72■□□□□ 0.27
EIF3C-209ENST00000566501 RTL5Q5HYW3 569 aaPredicted RBP16.7■□□□□ 0.26
EIF3C-209ENST00000566501 CC2D2AQ9P2K1 1620 aa16.68■□□□□ 0.26
EIF3C-209ENST00000566501 PKNOX2Q96KN3 472 aa16.67■□□□□ 0.26
EIF3C-209ENST00000566501 RANGAP1P46060 587 aaPredicted RBP16.66■□□□□ 0.26
EIF3C-209ENST00000566501 DDX10Q13206 875 aaKnown RBP16.64■□□□□ 0.25
EIF3C-209ENST00000566501 SOGA1O94964 1423 aa16.63■□□□□ 0.25
EIF3C-209ENST00000566501 PRDM2Q13029 1718 aa16.61■□□□□ 0.25
EIF3C-209ENST00000566501 ABCC8Q09428 1581 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms