RNA–Protein interactions for RNA: ENST00000566378.1

USP10-212, Transcript of ubiquitin specific peptidase 10, humanhuman

TSL 5

Gene USP10, Length 465 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP10-212ENST00000566378 AEBP2Q6ZN18 517 aaPredicted RBP22.91■■□□□ 1.26
USP10-212ENST00000566378 CHIC1Q5VXU3 224 aa21.49■■□□□ 1.03
USP10-212ENST00000566378 SENP3Q9H4L4 574 aaPredicted RBP19.56■□□□□ 0.72
USP10-212ENST00000566378 PHF23Q9BUL5 403 aaPredicted RBP19.29■□□□□ 0.68
USP10-212ENST00000566378 FOXD1Q16676 465 aa18.28■□□□□ 0.52
USP10-212ENST00000566378 POTEDQ86YR6 584 aa17.24■□□□□ 0.35
USP10-212ENST00000566378 MSH5O43196 834 aa17.18■□□□□ 0.34
USP10-212ENST00000566378 PLPPR3Q6T4P5 718 aa17.04■□□□□ 0.32
USP10-212ENST00000566378 PIAS4Q8N2W9 510 aaPredicted RBP17.01■□□□□ 0.31
USP10-212ENST00000566378 PPP6R1Q9UPN7 881 aa16.91■□□□□ 0.3
USP10-212ENST00000566378 ADRA2BP18089 450 aa16.83■□□□□ 0.28
USP10-212ENST00000566378 MAPK8IP2Q13387 824 aaPredicted RBP15.56■□□□□ 0.08
USP10-212ENST00000566378 DMRT2Q9Y5R5 561 aa15.47■□□□□ 0.07
USP10-212ENST00000566378 NISCHQ9Y2I1 1504 aa15.45■□□□□ 0.06
USP10-212ENST00000566378 SCAF1Q9H7N4 1312 aaKnown RBP15.38■□□□□ 0.05
USP10-212ENST00000566378 CACNB1Q02641 598 aaPredicted RBP14.93□□□□□ -0.02
USP10-212ENST00000566378 PPP4R3CPQ6ZMV5 832 aa14.92□□□□□ -0.02
USP10-212ENST00000566378 DCAF8L1A6NGE4 600 aa14.87□□□□□ -0.03
USP10-212ENST00000566378 HOXD11P31277 338 aaPredicted RBP14.8□□□□□ -0.04
USP10-212ENST00000566378 CNKSR2Q8WXI2 1034 aa14.69□□□□□ -0.06
USP10-212ENST00000566378 RNF39Q9H2S5 420 aa14.65□□□□□ -0.06
USP10-212ENST00000566378 RNF216Q9NWF9 866 aaPredicted RBP14.62□□□□□ -0.07
USP10-212ENST00000566378 C1QBPQ07021 282 aaKnown RBP14.41□□□□□ -0.1
USP10-212ENST00000566378 DNAJC5BQ9UF47 199 aa14.31□□□□□ -0.12
USP10-212ENST00000566378 NCBP3Q53F19 620 aaKnown RBP14.24□□□□□ -0.13
USP10-212ENST00000566378 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.11□□□□□ -0.15
USP10-212ENST00000566378 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
USP10-212ENST00000566378 U3KPZ7 1027 aaPredicted RBP13.79□□□□□ -0.2
USP10-212ENST00000566378 SPINK5Q9NQ38 1064 aaPredicted RBP13.68□□□□□ -0.22
USP10-212ENST00000566378 CAPN15O75808 1086 aa13.66□□□□□ -0.22
USP10-212ENST00000566378 DSG3P32926 999 aa13.64□□□□□ -0.23
USP10-212ENST00000566378 KCNA4P22459 653 aa13.56□□□□□ -0.24
USP10-212ENST00000566378 SLC4A2P04920 1241 aa13.5□□□□□ -0.25
USP10-212ENST00000566378 POTEHQ6S545 545 aa13.46□□□□□ -0.25
USP10-212ENST00000566378 TRHP20396 242 aaPredicted RBP13.39□□□□□ -0.27
USP10-212ENST00000566378 APLP2Q06481 763 aa13.34□□□□□ -0.27
USP10-212ENST00000566378 ABCB7O75027 752 aa13.33□□□□□ -0.28
USP10-212ENST00000566378 ZNF219Q9P2Y4 722 aaPredicted RBP13.32□□□□□ -0.28
USP10-212ENST00000566378 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.28□□□□□ -0.28
USP10-212ENST00000566378 HNRNPUL2Q1KMD3 747 aaKnown RBP13.28□□□□□ -0.28
USP10-212ENST00000566378 CCDC180Q9P1Z9 1646 aa13.22□□□□□ -0.29
USP10-212ENST00000566378 SAMD1Q6SPF0 538 aaPredicted RBP13.2□□□□□ -0.3
USP10-212ENST00000566378 ZCCHC6Q5VYS8 1495 aaKnown RBP13.17□□□□□ -0.3
USP10-212ENST00000566378 RBM42Q9BTD8 480 aaKnown RBP13□□□□□ -0.33
USP10-212ENST00000566378 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
USP10-212ENST00000566378 MYCNP04198 464 aaPredicted RBP12.99□□□□□ -0.33
USP10-212ENST00000566378 HRCP23327 699 aa12.97□□□□□ -0.33
USP10-212ENST00000566378 POLA2Q14181 598 aa12.96□□□□□ -0.33
USP10-212ENST00000566378 SUPT5HO00267 1087 aaKnown RBP12.88□□□□□ -0.35
USP10-212ENST00000566378 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
USP10-212ENST00000566378 CHRDL2Q6WN34 429 aa12.83□□□□□ -0.36
USP10-212ENST00000566378 MYO15BQ96JP2 1530 aa12.83□□□□□ -0.36
USP10-212ENST00000566378 ATF5Q9Y2D1 282 aaPredicted RBP12.75□□□□□ -0.37
USP10-212ENST00000566378 SLC4A1APQ9BWU0 796 aaKnown RBP12.74□□□□□ -0.37
USP10-212ENST00000566378 FOXD4L1Q9NU39 408 aa12.72□□□□□ -0.37
USP10-212ENST00000566378 AKT1S1Q96B36 256 aa12.66□□□□□ -0.38
USP10-212ENST00000566378 ZBTB12Q9Y330 459 aaPredicted RBP12.64□□□□□ -0.39
USP10-212ENST00000566378 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
USP10-212ENST00000566378 OSCARQ8IYS5 282 aa12.56□□□□□ -0.4
USP10-212ENST00000566378 REM2Q8IYK8 340 aaPredicted RBP12.55□□□□□ -0.4
USP10-212ENST00000566378 ABCC9O60706 1549 aa12.53□□□□□ -0.4
USP10-212ENST00000566378 ZEB1P37275 1124 aaPredicted RBP12.49□□□□□ -0.41
USP10-212ENST00000566378 PELP1Q8IZL8 1130 aaKnown RBP12.49□□□□□ -0.41
USP10-212ENST00000566378 SP7Q8TDD2 431 aaPredicted RBP12.49□□□□□ -0.41
USP10-212ENST00000566378 PIP4P2Q8N4L2 257 aa12.48□□□□□ -0.41
USP10-212ENST00000566378 ZBTB22O15209 634 aa12.47□□□□□ -0.41
USP10-212ENST00000566378 TRIM26Q12899 539 aaPredicted RBP12.47□□□□□ -0.41
USP10-212ENST00000566378 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
USP10-212ENST00000566378 FXR2P51116 673 aaKnown RBP eCLIP12.36□□□□□ -0.43
USP10-212ENST00000566378 PPARGC1BQ86YN6 1023 aaKnown RBP12.36□□□□□ -0.43
USP10-212ENST00000566378 ATXN8OSP0DMR3 200 aa12.34□□□□□ -0.43
USP10-212ENST00000566378 HAX1O00165 279 aa12.33□□□□□ -0.44
USP10-212ENST00000566378 RB1CC1Q8TDY2 1594 aa12.3□□□□□ -0.44
USP10-212ENST00000566378 DCAF8L2P0C7V8 631 aa12.27□□□□□ -0.45
USP10-212ENST00000566378 LOC105371045A0A1W2PR82 267 aa12.25□□□□□ -0.45
USP10-212ENST00000566378 RSF1Q96T23 1441 aaPredicted RBP12.25□□□□□ -0.45
USP10-212ENST00000566378 SPDYE2BA6NHP3 402 aa12.24□□□□□ -0.45
USP10-212ENST00000566378 SPDYE6P0CI01 402 aa12.24□□□□□ -0.45
USP10-212ENST00000566378 FBLN2P98095 1184 aa12.24□□□□□ -0.45
USP10-212ENST00000566378 SPDYE2Q495Y8 402 aa12.24□□□□□ -0.45
USP10-212ENST00000566378 EVX2Q03828 476 aa12.17□□□□□ -0.46
USP10-212ENST00000566378 MKRN4PQ13434 485 aaPredicted RBP12.14□□□□□ -0.47
USP10-212ENST00000566378 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
USP10-212ENST00000566378 EHMT2Q96KQ7 1210 aa12.13□□□□□ -0.47
USP10-212ENST00000566378 CLEC11AQ9Y240 323 aa12.12□□□□□ -0.47
USP10-212ENST00000566378 TRIM41Q8WV44 630 aa12.11□□□□□ -0.47
USP10-212ENST00000566378 PRKAR2AP13861 404 aaKnown RBP12.1□□□□□ -0.47
USP10-212ENST00000566378 SPDYE1Q8NFV5 336 aaPredicted RBP12.1□□□□□ -0.47
USP10-212ENST00000566378 NACADO15069 1562 aa12.08□□□□□ -0.48
USP10-212ENST00000566378 ZNF692Q9BU19 519 aaPredicted RBP12.07□□□□□ -0.48
USP10-212ENST00000566378 MYT1Q01538 1121 aa12.06□□□□□ -0.48
USP10-212ENST00000566378 SSUH2Q9Y2M2 353 aa12.06□□□□□ -0.48
USP10-212ENST00000566378 EIF4G1Q04637 1599 aaKnown RBP12.02□□□□□ -0.49
USP10-212ENST00000566378 BAZ1AQ9NRL2 1556 aaPredicted RBP12.02□□□□□ -0.49
USP10-212ENST00000566378 CSRNP3Q8WYN3 585 aa12.01□□□□□ -0.49
USP10-212ENST00000566378 C19orf67A6NJJ6 358 aa11.98□□□□□ -0.49
USP10-212ENST00000566378 WRNQ14191 1432 aaPredicted RBP eCLIP11.97□□□□□ -0.49
USP10-212ENST00000566378 MROH2BQ7Z745 1585 aa11.93□□□□□ -0.5
USP10-212ENST00000566378 CHADLQ6NUI6 762 aa11.92□□□□□ -0.5
USP10-212ENST00000566378 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms