RNA–Protein interactions for RNA: ENST00000566260.1

AC142086.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC142086.1, Length 1,682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC142086.1-201ENST00000566260 NISCHQ9Y2I1 1504 aa26.12■■□□□ 1.77
AC142086.1-201ENST00000566260 CCDC180Q9P1Z9 1646 aa22.76■■□□□ 1.23
AC142086.1-201ENST00000566260 AEBP2Q6ZN18 517 aaPredicted RBP22.39■■□□□ 1.17
AC142086.1-201ENST00000566260 ZCCHC6Q5VYS8 1495 aaKnown RBP21.96■■□□□ 1.11
AC142086.1-201ENST00000566260 DCAF8L2P0C7V8 631 aa21.61■■□□□ 1.05
AC142086.1-201ENST00000566260 DCAF1Q9Y4B6 1507 aa21.56■■□□□ 1.04
AC142086.1-201ENST00000566260 ABCC9O60706 1549 aa21.53■■□□□ 1.04
AC142086.1-201ENST00000566260 SHROOM4Q9ULL8 1493 aa21.41■■□□□ 1.02
AC142086.1-201ENST00000566260 MYO15BQ96JP2 1530 aa21.28■■□□□ 1
AC142086.1-201ENST00000566260 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
AC142086.1-201ENST00000566260 NACADO15069 1562 aa21.18■□□□□ 0.98
AC142086.1-201ENST00000566260 RB1CC1Q8TDY2 1594 aa21.01■□□□□ 0.95
AC142086.1-201ENST00000566260 SCRIBQ14160 1630 aa20.99■□□□□ 0.95
AC142086.1-201ENST00000566260 SUPT5HO00267 1087 aaKnown RBP20.6■□□□□ 0.89
AC142086.1-201ENST00000566260 UNC13AQ9UPW8 1703 aa20.58■□□□□ 0.88
AC142086.1-201ENST00000566260 BICRAQ9NZM4 1560 aa20.36■□□□□ 0.85
AC142086.1-201ENST00000566260 PABPN1Q86U42 306 aaKnown RBP eCLIP20.31■□□□□ 0.84
AC142086.1-201ENST00000566260 CECR2Q9BXF3 1484 aa20.3■□□□□ 0.84
AC142086.1-201ENST00000566260 RSF1Q96T23 1441 aaPredicted RBP20.28■□□□□ 0.84
AC142086.1-201ENST00000566260 MROH2BQ7Z745 1585 aa20.19■□□□□ 0.82
AC142086.1-201ENST00000566260 BAZ1AQ9NRL2 1556 aaPredicted RBP20.17■□□□□ 0.82
AC142086.1-201ENST00000566260 SMARCA4P51532 1647 aa20.09■□□□□ 0.81
AC142086.1-201ENST00000566260 WIZO95785 1651 aa20.04■□□□□ 0.8
AC142086.1-201ENST00000566260 TOP2AP11388 1531 aaKnown RBP19.84■□□□□ 0.77
AC142086.1-201ENST00000566260 PEG3Q9GZU2 1588 aa19.8■□□□□ 0.76
AC142086.1-201ENST00000566260 EIF4G1Q04637 1599 aaKnown RBP19.76■□□□□ 0.75
AC142086.1-201ENST00000566260 ATAD2BQ9ULI0 1458 aa19.73■□□□□ 0.75
AC142086.1-201ENST00000566260 SMARCA2P51531 1590 aa19.73■□□□□ 0.75
AC142086.1-201ENST00000566260 BAZ1BQ9UIG0 1483 aaKnown RBP19.65■□□□□ 0.74
AC142086.1-201ENST00000566260 CCDC88BA6NC98 1476 aa19.62■□□□□ 0.73
AC142086.1-201ENST00000566260 NCAPD3P42695 1498 aa19.54■□□□□ 0.72
AC142086.1-201ENST00000566260 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
AC142086.1-201ENST00000566260 CC2D2AQ9P2K1 1620 aa19.46■□□□□ 0.71
AC142086.1-201ENST00000566260 SENP3Q9H4L4 574 aaPredicted RBP19.45■□□□□ 0.7
AC142086.1-201ENST00000566260 TRIM41Q8WV44 630 aa19.34■□□□□ 0.69
AC142086.1-201ENST00000566260 ABCC8Q09428 1581 aa19.25■□□□□ 0.67
AC142086.1-201ENST00000566260 CFTRP13569 1480 aa19.12■□□□□ 0.65
AC142086.1-201ENST00000566260 WRNQ14191 1432 aaPredicted RBP eCLIP19.1■□□□□ 0.65
AC142086.1-201ENST00000566260 CADPSQ9ULU8 1353 aa19.06■□□□□ 0.64
AC142086.1-201ENST00000566260 PRDM2Q13029 1718 aa19.04■□□□□ 0.64
AC142086.1-201ENST00000566260 SYNJ1O43426 1573 aa19.03■□□□□ 0.64
AC142086.1-201ENST00000566260 FAM9AQ8IZU1 332 aaPredicted RBP19.02■□□□□ 0.64
AC142086.1-201ENST00000566260 PHF23Q9BUL5 403 aaPredicted RBP19.01■□□□□ 0.63
AC142086.1-201ENST00000566260 LOC105371045A0A1W2PR82 267 aa18.96■□□□□ 0.63
AC142086.1-201ENST00000566260 DNAJC5BQ9UF47 199 aa18.95■□□□□ 0.62
AC142086.1-201ENST00000566260 TOP2BQ02880 1626 aa18.93■□□□□ 0.62
AC142086.1-201ENST00000566260 BIVM-ERCC5R4GMW8 1640 aa18.91■□□□□ 0.62
AC142086.1-201ENST00000566260 NESP48681 1621 aa18.9■□□□□ 0.62
AC142086.1-201ENST00000566260 CUX1P39880 1505 aa18.89■□□□□ 0.61
AC142086.1-201ENST00000566260 LAMC3Q9Y6N6 1575 aa18.88■□□□□ 0.61
AC142086.1-201ENST00000566260 SOGA1O94964 1423 aa18.88■□□□□ 0.61
AC142086.1-201ENST00000566260 FANCD2Q9BXW9 1451 aa18.87■□□□□ 0.61
AC142086.1-201ENST00000566260 EEA1Q15075 1411 aa18.83■□□□□ 0.61
AC142086.1-201ENST00000566260 RUSC2Q8N2Y8 1516 aa18.81■□□□□ 0.6
AC142086.1-201ENST00000566260 EHMT2Q96KQ7 1210 aa18.79■□□□□ 0.6
AC142086.1-201ENST00000566260 CEP164Q9UPV0 1460 aa18.75■□□□□ 0.59
AC142086.1-201ENST00000566260 PDS5BQ9NTI5 1447 aa18.75■□□□□ 0.59
AC142086.1-201ENST00000566260 CSRNP3Q8WYN3 585 aa18.73■□□□□ 0.59
AC142086.1-201ENST00000566260 DNMBPQ6XZF7 1577 aa18.71■□□□□ 0.59
AC142086.1-201ENST00000566260 FGD5Q6ZNL6 1462 aa18.68■□□□□ 0.58
AC142086.1-201ENST00000566260 KIF21AQ7Z4S6 1674 aa18.67■□□□□ 0.58
AC142086.1-201ENST00000566260 TOPBP1Q92547 1522 aa18.67■□□□□ 0.58
AC142086.1-201ENST00000566260 URB2Q14146 1524 aaKnown RBP18.63■□□□□ 0.57
AC142086.1-201ENST00000566260 KIF27Q86VH2 1401 aa18.62■□□□□ 0.57
AC142086.1-201ENST00000566260 GOLGA3Q08378 1498 aa18.61■□□□□ 0.57
AC142086.1-201ENST00000566260 KIF21BO75037 1637 aa18.6■□□□□ 0.57
AC142086.1-201ENST00000566260 CUX2O14529 1486 aa18.58■□□□□ 0.57
AC142086.1-201ENST00000566260 POLA1P09884 1462 aaPredicted RBP18.57■□□□□ 0.56
AC142086.1-201ENST00000566260 RAD54L2Q9Y4B4 1467 aa18.53■□□□□ 0.56
AC142086.1-201ENST00000566260 TNIKQ9UKE5 1360 aa18.53■□□□□ 0.56
AC142086.1-201ENST00000566260 UBTFP17480 764 aaKnown RBP18.53■□□□□ 0.56
AC142086.1-201ENST00000566260 MRC2Q9UBG0 1479 aa18.52■□□□□ 0.56
AC142086.1-201ENST00000566260 RAPGEF2Q9Y4G8 1499 aa18.5■□□□□ 0.55
AC142086.1-201ENST00000566260 ABCA10Q8WWZ4 1543 aa18.49■□□□□ 0.55
AC142086.1-201ENST00000566260 PRXQ9BXM0 1461 aa18.48■□□□□ 0.55
AC142086.1-201ENST00000566260 ERCC6Q03468 1493 aa18.48■□□□□ 0.55
AC142086.1-201ENST00000566260 CEP162Q5TB80 1403 aa18.46■□□□□ 0.55
AC142086.1-201ENST00000566260 ERICH3Q5RHP9 1530 aa18.46■□□□□ 0.55
AC142086.1-201ENST00000566260 WDR97A6NE52 1622 aa18.44■□□□□ 0.54
AC142086.1-201ENST00000566260 IGF1RP08069 1367 aa18.42■□□□□ 0.54
AC142086.1-201ENST00000566260 WDR62O43379 1518 aa18.4■□□□□ 0.54
AC142086.1-201ENST00000566260 TARBP1Q13395 1621 aaKnown RBP18.37■□□□□ 0.53
AC142086.1-201ENST00000566260 ABCA5Q8WWZ7 1642 aa18.35■□□□□ 0.53
AC142086.1-201ENST00000566260 THOC2Q8NI27 1593 aaKnown RBP18.35■□□□□ 0.53
AC142086.1-201ENST00000566260 CARMIL1Q5VZK9 1371 aa18.34■□□□□ 0.53
AC142086.1-201ENST00000566260 TDRD9Q8NDG6 1382 aaKnown RBP18.34■□□□□ 0.53
AC142086.1-201ENST00000566260 GAPVD1Q14C86 1478 aa18.32■□□□□ 0.52
AC142086.1-201ENST00000566260 CLIP1P30622 1438 aa18.31■□□□□ 0.52
AC142086.1-201ENST00000566260 CUL7Q14999 1698 aa18.3■□□□□ 0.52
AC142086.1-201ENST00000566260 IFT140Q96RY7 1462 aa18.29■□□□□ 0.52
AC142086.1-201ENST00000566260 RANGAP1P46060 587 aaPredicted RBP18.26■□□□□ 0.51
AC142086.1-201ENST00000566260 PBRM1Q86U86 1689 aa18.22■□□□□ 0.51
AC142086.1-201ENST00000566260 AQRO60306 1485 aaKnown RBP eCLIP18.22■□□□□ 0.51
AC142086.1-201ENST00000566260 ZNF608Q9ULD9 1512 aaPredicted RBP18.2■□□□□ 0.5
AC142086.1-201ENST00000566260 GRIN2BQ13224 1484 aa18.17■□□□□ 0.5
AC142086.1-201ENST00000566260 EIF4G3O43432 1585 aaKnown RBP18.15■□□□□ 0.5
AC142086.1-201ENST00000566260 PCGF6Q9BYE7 350 aa18.15■□□□□ 0.5
AC142086.1-201ENST00000566260 VPS8Q8N3P4 1428 aa18.14■□□□□ 0.5
AC142086.1-201ENST00000566260 ADAMTS12P58397 1594 aa18.13■□□□□ 0.49
AC142086.1-201ENST00000566260 ARAP1Q96P48 1450 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms