RNA–Protein interactions for RNA: ENST00000565918.5

TMX3-207, Transcript of thioredoxin related transmembrane protein 3, humanhuman

TSL 5

Gene TMX3, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMX3-207ENST00000565918 NISCHQ9Y2I1 1504 aa27.67■■■□□ 2.02
TMX3-207ENST00000565918 ABCC9O60706 1549 aa25.04■■□□□ 1.6
TMX3-207ENST00000565918 CCDC180Q9P1Z9 1646 aa24.82■■□□□ 1.56
TMX3-207ENST00000565918 DNAJC5BQ9UF47 199 aa23.75■■□□□ 1.39
TMX3-207ENST00000565918 RB1CC1Q8TDY2 1594 aa23.67■■□□□ 1.38
TMX3-207ENST00000565918 NACADO15069 1562 aa23.49■■□□□ 1.35
TMX3-207ENST00000565918 DCAF8L2P0C7V8 631 aa23.39■■□□□ 1.33
TMX3-207ENST00000565918 PABPN1Q86U42 306 aaKnown RBP eCLIP23.33■■□□□ 1.33
TMX3-207ENST00000565918 UNC13AQ9UPW8 1703 aa23.29■■□□□ 1.32
TMX3-207ENST00000565918 BICRAQ9NZM4 1560 aa23.15■■□□□ 1.3
TMX3-207ENST00000565918 MYO15BQ96JP2 1530 aa23.11■■□□□ 1.29
TMX3-207ENST00000565918 ZCCHC6Q5VYS8 1495 aaKnown RBP22.91■■□□□ 1.26
TMX3-207ENST00000565918 DCAF1Q9Y4B6 1507 aa22.79■■□□□ 1.24
TMX3-207ENST00000565918 SCRIBQ14160 1630 aa22.68■■□□□ 1.22
TMX3-207ENST00000565918 CC2D2AQ9P2K1 1620 aa22.6■■□□□ 1.21
TMX3-207ENST00000565918 SHROOM4Q9ULL8 1493 aa22.6■■□□□ 1.21
TMX3-207ENST00000565918 CECR2Q9BXF3 1484 aa22.53■■□□□ 1.2
TMX3-207ENST00000565918 EIF4G1Q04637 1599 aaKnown RBP22.51■■□□□ 1.19
TMX3-207ENST00000565918 DNAJC5Q9H3Z4 198 aa21.75■■□□□ 1.07
TMX3-207ENST00000565918 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
TMX3-207ENST00000565918 ATAD2BQ9ULI0 1458 aa21.68■■□□□ 1.06
TMX3-207ENST00000565918 SMARCA4P51532 1647 aa21.61■■□□□ 1.05
TMX3-207ENST00000565918 NESP48681 1621 aa21.54■■□□□ 1.04
TMX3-207ENST00000565918 CUX2O14529 1486 aa21.53■■□□□ 1.04
TMX3-207ENST00000565918 HMGXB3Q12766 1538 aa21.52■■□□□ 1.04
TMX3-207ENST00000565918 SMARCA2P51531 1590 aa21.52■■□□□ 1.04
TMX3-207ENST00000565918 ERCC6Q03468 1493 aa21.52■■□□□ 1.03
TMX3-207ENST00000565918 BAZ1AQ9NRL2 1556 aaPredicted RBP21.42■■□□□ 1.02
TMX3-207ENST00000565918 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.02
TMX3-207ENST00000565918 MROH2BQ7Z745 1585 aa21.39■■□□□ 1.01
TMX3-207ENST00000565918 PEG3Q9GZU2 1588 aa21.39■■□□□ 1.01
TMX3-207ENST00000565918 THOC2Q8NI27 1593 aaKnown RBP21.28■■□□□ 1
TMX3-207ENST00000565918 LAMC3Q9Y6N6 1575 aa21.22■□□□□ 0.99
TMX3-207ENST00000565918 KIF21AQ7Z4S6 1674 aa21.21■□□□□ 0.99
TMX3-207ENST00000565918 WIZO95785 1651 aa21.12■□□□□ 0.97
TMX3-207ENST00000565918 PDS5BQ9NTI5 1447 aa21.06■□□□□ 0.96
TMX3-207ENST00000565918 CADPSQ9ULU8 1353 aa21.06■□□□□ 0.96
TMX3-207ENST00000565918 MRC2Q9UBG0 1479 aa20.95■□□□□ 0.94
TMX3-207ENST00000565918 WDR62O43379 1518 aa20.93■□□□□ 0.94
TMX3-207ENST00000565918 RSF1Q96T23 1441 aaPredicted RBP20.87■□□□□ 0.93
TMX3-207ENST00000565918 FANCD2Q9BXW9 1451 aa20.82■□□□□ 0.92
TMX3-207ENST00000565918 CEP164Q9UPV0 1460 aa20.82■□□□□ 0.92
TMX3-207ENST00000565918 CFTRP13569 1480 aa20.81■□□□□ 0.92
TMX3-207ENST00000565918 TOP2AP11388 1531 aaKnown RBP20.77■□□□□ 0.92
TMX3-207ENST00000565918 TRIM41Q8WV44 630 aa20.73■□□□□ 0.91
TMX3-207ENST00000565918 URB2Q14146 1524 aaKnown RBP20.73■□□□□ 0.91
TMX3-207ENST00000565918 CCDC88BA6NC98 1476 aa20.58■□□□□ 0.89
TMX3-207ENST00000565918 PRDM2Q13029 1718 aa20.56■□□□□ 0.88
TMX3-207ENST00000565918 OSCARQ8IYS5 282 aa20.54■□□□□ 0.88
TMX3-207ENST00000565918 ZNF608Q9ULD9 1512 aaPredicted RBP20.51■□□□□ 0.87
TMX3-207ENST00000565918 TOPBP1Q92547 1522 aa20.44■□□□□ 0.86
TMX3-207ENST00000565918 IFT140Q96RY7 1462 aa20.41■□□□□ 0.86
TMX3-207ENST00000565918 RIMBP3CA6NJZ7 1639 aa20.37■□□□□ 0.85
TMX3-207ENST00000565918 RIMBP3BA6NNM3 1639 aa20.37■□□□□ 0.85
TMX3-207ENST00000565918 RIMBP3Q9UFD9 1639 aa20.37■□□□□ 0.85
TMX3-207ENST00000565918 EIF4G3O43432 1585 aaKnown RBP20.32■□□□□ 0.84
TMX3-207ENST00000565918 DNMBPQ6XZF7 1577 aa20.31■□□□□ 0.84
TMX3-207ENST00000565918 TARBP1Q13395 1621 aaKnown RBP20.3■□□□□ 0.84
TMX3-207ENST00000565918 AQRO60306 1485 aaKnown RBP eCLIP20.29■□□□□ 0.844e-8■■■■□ 24.7
TMX3-207ENST00000565918 ARHGEF11O15085 1522 aa20.27■□□□□ 0.83
TMX3-207ENST00000565918 ABCC8Q09428 1581 aa20.26■□□□□ 0.83
TMX3-207ENST00000565918 POLA1P09884 1462 aaPredicted RBP20.23■□□□□ 0.83
TMX3-207ENST00000565918 CHD1O14646 1710 aa20.22■□□□□ 0.83
TMX3-207ENST00000565918 RAD54L2Q9Y4B4 1467 aa20.21■□□□□ 0.83
TMX3-207ENST00000565918 TDRD9Q8NDG6 1382 aaKnown RBP20.13■□□□□ 0.81
TMX3-207ENST00000565918 CYB5RLQ6IPT4 315 aa20.13■□□□□ 0.81
TMX3-207ENST00000565918 SOGA1O94964 1423 aa20.1■□□□□ 0.81
TMX3-207ENST00000565918 ARAP1Q96P48 1450 aa20.1■□□□□ 0.81
TMX3-207ENST00000565918 FBLN2P98095 1184 aa20.09■□□□□ 0.81
TMX3-207ENST00000565918 CUX1P39880 1505 aa20.08■□□□□ 0.81
TMX3-207ENST00000565918 FGD5Q6ZNL6 1462 aa20.08■□□□□ 0.81
TMX3-207ENST00000565918 SNAPC4Q5SXM2 1469 aa20.04■□□□□ 0.8
TMX3-207ENST00000565918 CLASP1Q7Z460 1538 aa19.98■□□□□ 0.79
TMX3-207ENST00000565918 WDR97A6NE52 1622 aa19.96■□□□□ 0.79
TMX3-207ENST00000565918 GRIN2BQ13224 1484 aa19.91■□□□□ 0.78
TMX3-207ENST00000565918 MAGI1Q96QZ7 1491 aaPredicted RBP19.91■□□□□ 0.78
TMX3-207ENST00000565918 CHMP7Q8WUX9 453 aaPredicted RBP19.9■□□□□ 0.78
TMX3-207ENST00000565918 TRHP20396 242 aaPredicted RBP19.88■□□□□ 0.77
TMX3-207ENST00000565918 SYNJ2O15056 1496 aa19.87■□□□□ 0.77
TMX3-207ENST00000565918 PBRM1Q86U86 1689 aa19.87■□□□□ 0.77
TMX3-207ENST00000565918 SYNJ1O43426 1573 aa19.86■□□□□ 0.77
TMX3-207ENST00000565918 GAPVD1Q14C86 1478 aa19.85■□□□□ 0.77
TMX3-207ENST00000565918 ABCA5Q8WWZ7 1642 aa19.83■□□□□ 0.76
TMX3-207ENST00000565918 SUPT5HO00267 1087 aaKnown RBP19.82■□□□□ 0.76
TMX3-207ENST00000565918 ABCA10Q8WWZ4 1543 aa19.81■□□□□ 0.76
TMX3-207ENST00000565918 ERCC6L2Q5T890 1561 aa19.75■□□□□ 0.75
TMX3-207ENST00000565918 GRIN2AQ12879 1464 aa19.69■□□□□ 0.74
TMX3-207ENST00000565918 CEP170Q5SW79 1584 aa19.69■□□□□ 0.74
TMX3-207ENST00000565918 BIVM-ERCC5R4GMW8 1640 aa19.68■□□□□ 0.74
TMX3-207ENST00000565918 ADAMTS12P58397 1594 aa19.67■□□□□ 0.74
TMX3-207ENST00000565918 WRNQ14191 1432 aaPredicted RBP eCLIP19.67■□□□□ 0.74
TMX3-207ENST00000565918 TOP2BQ02880 1626 aa19.66■□□□□ 0.74
TMX3-207ENST00000565918 NUP160Q12769 1436 aa19.65■□□□□ 0.74
TMX3-207ENST00000565918 SHROOM2Q13796 1616 aa19.58■□□□□ 0.73
TMX3-207ENST00000565918 FHAD1B1AJZ9 1412 aa19.57■□□□□ 0.72
TMX3-207ENST00000565918 ERICH3Q5RHP9 1530 aa19.53■□□□□ 0.72
TMX3-207ENST00000565918 PRG4Q92954 1404 aaPredicted RBP19.45■□□□□ 0.7
TMX3-207ENST00000565918 JPH4Q96JJ6 628 aa19.43■□□□□ 0.7
TMX3-207ENST00000565918 KIF13AQ9H1H9 1805 aa19.42■□□□□ 0.7
TMX3-207ENST00000565918 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 103.7 ms