RNA–Protein interactions for RNA: ENST00000565723.1

RPL4-209, Transcript of ribosomal protein L4, humanhuman

TSL 3

Gene RPL4, Length 408 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL4-209ENST00000565723 NISCHQ9Y2I1 1504 aa23.74■■□□□ 1.39
RPL4-209ENST00000565723 ABCC9O60706 1549 aa21.61■■□□□ 1.05
RPL4-209ENST00000565723 CCDC180Q9P1Z9 1646 aa21.37■■□□□ 1.01
RPL4-209ENST00000565723 DNAJC5BQ9UF47 199 aa20.52■□□□□ 0.88
RPL4-209ENST00000565723 RB1CC1Q8TDY2 1594 aa20.5■□□□□ 0.87
RPL4-209ENST00000565723 NACADO15069 1562 aa20.33■□□□□ 0.84
RPL4-209ENST00000565723 DCAF8L2P0C7V8 631 aa20.21■□□□□ 0.83
RPL4-209ENST00000565723 PABPN1Q86U42 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
RPL4-209ENST00000565723 MYO15BQ96JP2 1530 aa19.99■□□□□ 0.79
RPL4-209ENST00000565723 UNC13AQ9UPW8 1703 aa19.93■□□□□ 0.78
RPL4-209ENST00000565723 BICRAQ9NZM4 1560 aa19.86■□□□□ 0.77
RPL4-209ENST00000565723 SHROOM4Q9ULL8 1493 aa19.66■□□□□ 0.74
RPL4-209ENST00000565723 DCAF1Q9Y4B6 1507 aa19.62■□□□□ 0.73
RPL4-209ENST00000565723 ZCCHC6Q5VYS8 1495 aaKnown RBP19.59■□□□□ 0.73
RPL4-209ENST00000565723 CECR2Q9BXF3 1484 aa19.53■□□□□ 0.72
RPL4-209ENST00000565723 CC2D2AQ9P2K1 1620 aa19.51■□□□□ 0.71
RPL4-209ENST00000565723 SCRIBQ14160 1630 aa19.42■□□□□ 0.7
RPL4-209ENST00000565723 EIF4G1Q04637 1599 aaKnown RBP19.41■□□□□ 0.7
RPL4-209ENST00000565723 DNAJC5Q9H3Z4 198 aa19.1■□□□□ 0.65
RPL4-209ENST00000565723 CUX2O14529 1486 aa18.78■□□□□ 0.6
RPL4-209ENST00000565723 NCAPD3P42695 1498 aa18.78■□□□□ 0.6
RPL4-209ENST00000565723 ERCC6Q03468 1493 aa18.71■□□□□ 0.59
RPL4-209ENST00000565723 AEBP2Q6ZN18 517 aaPredicted RBP18.69■□□□□ 0.58
RPL4-209ENST00000565723 ATAD2BQ9ULI0 1458 aa18.65■□□□□ 0.58
RPL4-209ENST00000565723 SMARCA2P51531 1590 aa18.59■□□□□ 0.57
RPL4-209ENST00000565723 HMGXB3Q12766 1538 aa18.57■□□□□ 0.56
RPL4-209ENST00000565723 SMARCA4P51532 1647 aa18.53■□□□□ 0.56
RPL4-209ENST00000565723 NESP48681 1621 aa18.48■□□□□ 0.55
RPL4-209ENST00000565723 BAZ1BQ9UIG0 1483 aaKnown RBP18.46■□□□□ 0.54
RPL4-209ENST00000565723 BAZ1AQ9NRL2 1556 aaPredicted RBP18.45■□□□□ 0.54
RPL4-209ENST00000565723 PEG3Q9GZU2 1588 aa18.38■□□□□ 0.53
RPL4-209ENST00000565723 LAMC3Q9Y6N6 1575 aa18.37■□□□□ 0.53
RPL4-209ENST00000565723 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
RPL4-209ENST00000565723 THOC2Q8NI27 1593 aaKnown RBP18.31■□□□□ 0.52
RPL4-209ENST00000565723 MROH2BQ7Z745 1585 aa18.25■□□□□ 0.51
RPL4-209ENST00000565723 CADPSQ9ULU8 1353 aa18.2■□□□□ 0.5
RPL4-209ENST00000565723 KIF21AQ7Z4S6 1674 aa18.2■□□□□ 0.5
RPL4-209ENST00000565723 TRIM41Q8WV44 630 aa18.11■□□□□ 0.49
RPL4-209ENST00000565723 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
RPL4-209ENST00000565723 WDR62O43379 1518 aa18.06■□□□□ 0.48
RPL4-209ENST00000565723 WIZO95785 1651 aa18■□□□□ 0.47
RPL4-209ENST00000565723 CEP164Q9UPV0 1460 aa18■□□□□ 0.47
RPL4-209ENST00000565723 OSCARQ8IYS5 282 aa17.96■□□□□ 0.47
RPL4-209ENST00000565723 FANCD2Q9BXW9 1451 aa17.95■□□□□ 0.46
RPL4-209ENST00000565723 CFTRP13569 1480 aa17.93■□□□□ 0.46
RPL4-209ENST00000565723 RSF1Q96T23 1441 aaPredicted RBP17.82■□□□□ 0.44
RPL4-209ENST00000565723 URB2Q14146 1524 aaKnown RBP17.79■□□□□ 0.44
RPL4-209ENST00000565723 TOP2AP11388 1531 aaKnown RBP17.78■□□□□ 0.44
RPL4-209ENST00000565723 IFT140Q96RY7 1462 aa17.67■□□□□ 0.42
RPL4-209ENST00000565723 PRDM2Q13029 1718 aa17.63■□□□□ 0.41
RPL4-209ENST00000565723 CCDC88BA6NC98 1476 aa17.61■□□□□ 0.41
RPL4-209ENST00000565723 ZNF608Q9ULD9 1512 aaPredicted RBP17.61■□□□□ 0.41
RPL4-209ENST00000565723 ABCC8Q09428 1581 aa17.61■□□□□ 0.41
RPL4-209ENST00000565723 RIMBP3CA6NJZ7 1639 aa17.61■□□□□ 0.41
RPL4-209ENST00000565723 RIMBP3BA6NNM3 1639 aa17.61■□□□□ 0.41
RPL4-209ENST00000565723 RIMBP3Q9UFD9 1639 aa17.61■□□□□ 0.41
RPL4-209ENST00000565723 TOPBP1Q92547 1522 aa17.57■□□□□ 0.4
RPL4-209ENST00000565723 ARHGEF11O15085 1522 aa17.55■□□□□ 0.4
RPL4-209ENST00000565723 CHIC1Q5VXU3 224 aa17.54■□□□□ 0.4
RPL4-209ENST00000565723 CYB5RLQ6IPT4 315 aa17.52■□□□□ 0.4
RPL4-209ENST00000565723 DNMBPQ6XZF7 1577 aa17.49■□□□□ 0.39
RPL4-209ENST00000565723 EIF4G3O43432 1585 aaKnown RBP17.47■□□□□ 0.39
RPL4-209ENST00000565723 AQRO60306 1485 aaKnown RBP eCLIP17.44■□□□□ 0.38
RPL4-209ENST00000565723 FBLN2P98095 1184 aa17.44■□□□□ 0.38
RPL4-209ENST00000565723 TARBP1Q13395 1621 aaKnown RBP17.42■□□□□ 0.38
RPL4-209ENST00000565723 TRHP20396 242 aaPredicted RBP17.41■□□□□ 0.38
RPL4-209ENST00000565723 POLA1P09884 1462 aaPredicted RBP17.37■□□□□ 0.37
RPL4-209ENST00000565723 CHD1O14646 1710 aa17.37■□□□□ 0.37
RPL4-209ENST00000565723 SOGA1O94964 1423 aa17.35■□□□□ 0.37
RPL4-209ENST00000565723 ARAP1Q96P48 1450 aa17.35■□□□□ 0.37
RPL4-209ENST00000565723 TDRD9Q8NDG6 1382 aaKnown RBP17.32■□□□□ 0.36
RPL4-209ENST00000565723 RAD54L2Q9Y4B4 1467 aa17.31■□□□□ 0.36
RPL4-209ENST00000565723 CHMP7Q8WUX9 453 aaPredicted RBP17.3■□□□□ 0.36
RPL4-209ENST00000565723 WDR97A6NE52 1622 aa17.28■□□□□ 0.36
RPL4-209ENST00000565723 SNAPC4Q5SXM2 1469 aa17.24■□□□□ 0.35
RPL4-209ENST00000565723 FGD5Q6ZNL6 1462 aa17.23■□□□□ 0.35
RPL4-209ENST00000565723 MAGI1Q96QZ7 1491 aaPredicted RBP17.23■□□□□ 0.35
RPL4-209ENST00000565723 SYNJ1O43426 1573 aa17.21■□□□□ 0.35
RPL4-209ENST00000565723 GRIN2BQ13224 1484 aa17.21■□□□□ 0.35
RPL4-209ENST00000565723 CLASP1Q7Z460 1538 aa17.21■□□□□ 0.34
RPL4-209ENST00000565723 SYNJ2O15056 1496 aa17.18■□□□□ 0.34
RPL4-209ENST00000565723 CUX1P39880 1505 aa17.16■□□□□ 0.34
RPL4-209ENST00000565723 GAPVD1Q14C86 1478 aa17.12■□□□□ 0.33
RPL4-209ENST00000565723 ABCA10Q8WWZ4 1543 aa17.04■□□□□ 0.32
RPL4-209ENST00000565723 PBRM1Q86U86 1689 aa17.03■□□□□ 0.32
RPL4-209ENST00000565723 ABCA5Q8WWZ7 1642 aa16.99■□□□□ 0.31
RPL4-209ENST00000565723 WRNQ14191 1432 aaPredicted RBP eCLIP16.96■□□□□ 0.31
RPL4-209ENST00000565723 GRIN2AQ12879 1464 aa16.96■□□□□ 0.31
RPL4-209ENST00000565723 NUP160Q12769 1436 aa16.93■□□□□ 0.3
RPL4-209ENST00000565723 FHAD1B1AJZ9 1412 aa16.9■□□□□ 0.3
RPL4-209ENST00000565723 CEP170Q5SW79 1584 aa16.89■□□□□ 0.29
RPL4-209ENST00000565723 ERCC6L2Q5T890 1561 aa16.89■□□□□ 0.29
RPL4-209ENST00000565723 SUPT5HO00267 1087 aaKnown RBP16.88■□□□□ 0.29
RPL4-209ENST00000565723 ADAMTS12P58397 1594 aa16.87■□□□□ 0.29
RPL4-209ENST00000565723 TOP2BQ02880 1626 aa16.84■□□□□ 0.29
RPL4-209ENST00000565723 SHROOM2Q13796 1616 aa16.84■□□□□ 0.29
RPL4-209ENST00000565723 ERICH3Q5RHP9 1530 aa16.83■□□□□ 0.28
RPL4-209ENST00000565723 JPH4Q96JJ6 628 aa16.82■□□□□ 0.28
RPL4-209ENST00000565723 BIVM-ERCC5R4GMW8 1640 aa16.81■□□□□ 0.28
RPL4-209ENST00000565723 PRG4Q92954 1404 aaPredicted RBP16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms