RNA–Protein interactions for RNA: ENST00000565571.5

RPL13-213, Transcript of ribosomal protein L13, humanhuman

TSL 2

Gene RPL13, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13-213ENST00000565571 NISCHQ9Y2I1 1504 aa35.64■■■■□ 3.3
RPL13-213ENST00000565571 ABCC9O60706 1549 aa32■■■□□ 2.71
RPL13-213ENST00000565571 CCDC180Q9P1Z9 1646 aa31.82■■■□□ 2.69
RPL13-213ENST00000565571 RB1CC1Q8TDY2 1594 aa30.34■■■□□ 2.45
RPL13-213ENST00000565571 DCAF8L2P0C7V8 631 aa30.2■■■□□ 2.43
RPL13-213ENST00000565571 DNAJC5BQ9UF47 199 aa30.16■■■□□ 2.42
RPL13-213ENST00000565571 NACADO15069 1562 aa30.15■■■□□ 2.42
RPL13-213ENST00000565571 PABPN1Q86U42 306 aaKnown RBP eCLIP29.89■■■□□ 2.382e-10■□□□□ 10.4
RPL13-213ENST00000565571 MYO15BQ96JP2 1530 aa29.73■■■□□ 2.35
RPL13-213ENST00000565571 UNC13AQ9UPW8 1703 aa29.65■■■□□ 2.34
RPL13-213ENST00000565571 BICRAQ9NZM4 1560 aa29.55■■■□□ 2.32
RPL13-213ENST00000565571 ZCCHC6Q5VYS8 1495 aaKnown RBP29.51■■■□□ 2.31
RPL13-213ENST00000565571 DCAF1Q9Y4B6 1507 aa29.38■■■□□ 2.29
RPL13-213ENST00000565571 SCRIBQ14160 1630 aa29.11■■■□□ 2.25
RPL13-213ENST00000565571 SHROOM4Q9ULL8 1493 aa29.01■■■□□ 2.23
RPL13-213ENST00000565571 CC2D2AQ9P2K1 1620 aa28.84■■■□□ 2.21
RPL13-213ENST00000565571 CECR2Q9BXF3 1484 aa28.79■■■□□ 2.2
RPL13-213ENST00000565571 EIF4G1Q04637 1599 aaKnown RBP28.78■■■□□ 2.2
RPL13-213ENST00000565571 NCAPD3P42695 1498 aa27.91■■■□□ 2.06
RPL13-213ENST00000565571 ATAD2BQ9ULI0 1458 aa27.84■■■□□ 2.05
RPL13-213ENST00000565571 SMARCA4P51532 1647 aa27.74■■■□□ 2.03
RPL13-213ENST00000565571 SMARCA2P51531 1590 aa27.68■■■□□ 2.02
RPL13-213ENST00000565571 HMGXB3Q12766 1538 aa27.62■■■□□ 2.01
RPL13-213ENST00000565571 BAZ1AQ9NRL2 1556 aaPredicted RBP27.6■■■□□ 2.01
RPL13-213ENST00000565571 DNAJC5Q9H3Z4 198 aa27.58■■■□□ 2.01
RPL13-213ENST00000565571 ERCC6Q03468 1493 aa27.56■■■□□ 2
RPL13-213ENST00000565571 BAZ1BQ9UIG0 1483 aaKnown RBP27.52■■■□□ 2
RPL13-213ENST00000565571 NESP48681 1621 aa27.52■■■□□ 2
RPL13-213ENST00000565571 MROH2BQ7Z745 1585 aa27.5■■□□□ 1.99
RPL13-213ENST00000565571 CUX2O14529 1486 aa27.47■■□□□ 1.99
RPL13-213ENST00000565571 PEG3Q9GZU2 1588 aa27.47■■□□□ 1.99
RPL13-213ENST00000565571 LAMC3Q9Y6N6 1575 aa27.19■■□□□ 1.94
RPL13-213ENST00000565571 WIZO95785 1651 aa27.13■■□□□ 1.93
RPL13-213ENST00000565571 THOC2Q8NI27 1593 aaKnown RBP27.11■■□□□ 1.93
RPL13-213ENST00000565571 PDS5BQ9NTI5 1447 aa27.09■■□□□ 1.93
RPL13-213ENST00000565571 CADPSQ9ULU8 1353 aa27.09■■□□□ 1.93
RPL13-213ENST00000565571 KIF21AQ7Z4S6 1674 aa27.04■■□□□ 1.92
RPL13-213ENST00000565571 RSF1Q96T23 1441 aaPredicted RBP26.96■■□□□ 1.91
RPL13-213ENST00000565571 MRC2Q9UBG0 1479 aa26.85■■□□□ 1.89
RPL13-213ENST00000565571 WDR62O43379 1518 aa26.76■■□□□ 1.87
RPL13-213ENST00000565571 CFTRP13569 1480 aa26.76■■□□□ 1.87
RPL13-213ENST00000565571 FANCD2Q9BXW9 1451 aa26.75■■□□□ 1.87
RPL13-213ENST00000565571 TOP2AP11388 1531 aaKnown RBP26.75■■□□□ 1.87
RPL13-213ENST00000565571 CEP164Q9UPV0 1460 aa26.74■■□□□ 1.87
RPL13-213ENST00000565571 URB2Q14146 1524 aaKnown RBP26.55■■□□□ 1.84
RPL13-213ENST00000565571 CCDC88BA6NC98 1476 aa26.54■■□□□ 1.84
RPL13-213ENST00000565571 TRIM41Q8WV44 630 aa26.39■■□□□ 1.82
RPL13-213ENST00000565571 OSCARQ8IYS5 282 aa26.33■■□□□ 1.81
RPL13-213ENST00000565571 PRDM2Q13029 1718 aa26.31■■□□□ 1.8
RPL13-213ENST00000565571 ZNF608Q9ULD9 1512 aaPredicted RBP26.25■■□□□ 1.79
RPL13-213ENST00000565571 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
RPL13-213ENST00000565571 IFT140Q96RY7 1462 aa26.22■■□□□ 1.79
RPL13-213ENST00000565571 ABCC8Q09428 1581 aa26.13■■□□□ 1.77
RPL13-213ENST00000565571 DNMBPQ6XZF7 1577 aa26.1■■□□□ 1.77
RPL13-213ENST00000565571 AQRO60306 1485 aaKnown RBP eCLIP26.03■■□□□ 1.762e-12■■■■■ 28.1
RPL13-213ENST00000565571 TARBP1Q13395 1621 aaKnown RBP25.99■■□□□ 1.75
RPL13-213ENST00000565571 EIF4G3O43432 1585 aaKnown RBP25.99■■□□□ 1.75
RPL13-213ENST00000565571 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
RPL13-213ENST00000565571 RAD54L2Q9Y4B4 1467 aa25.95■■□□□ 1.74
RPL13-213ENST00000565571 RIMBP3CA6NJZ7 1639 aa25.9■■□□□ 1.74
RPL13-213ENST00000565571 RIMBP3BA6NNM3 1639 aa25.9■■□□□ 1.74
RPL13-213ENST00000565571 RIMBP3Q9UFD9 1639 aa25.9■■□□□ 1.74
RPL13-213ENST00000565571 SOGA1O94964 1423 aa25.89■■□□□ 1.74
RPL13-213ENST00000565571 TDRD9Q8NDG6 1382 aaKnown RBP25.89■■□□□ 1.74
RPL13-213ENST00000565571 FBLN2P98095 1184 aa25.87■■□□□ 1.73
RPL13-213ENST00000565571 SUPT5HO00267 1087 aaKnown RBP25.85■■□□□ 1.73
RPL13-213ENST00000565571 ARHGEF11O15085 1522 aa25.84■■□□□ 1.73
RPL13-213ENST00000565571 CUX1P39880 1505 aa25.83■■□□□ 1.72
RPL13-213ENST00000565571 FGD5Q6ZNL6 1462 aa25.82■■□□□ 1.72
RPL13-213ENST00000565571 CHD1O14646 1710 aa25.77■■□□□ 1.72
RPL13-213ENST00000565571 CYB5RLQ6IPT4 315 aa25.77■■□□□ 1.72
RPL13-213ENST00000565571 SNAPC4Q5SXM2 1469 aa25.7■■□□□ 1.7
RPL13-213ENST00000565571 CHMP7Q8WUX9 453 aaPredicted RBP25.66■■□□□ 1.7
RPL13-213ENST00000565571 GRIN2BQ13224 1484 aa25.62■■□□□ 1.69
RPL13-213ENST00000565571 ARAP1Q96P48 1450 aa25.62■■□□□ 1.69
RPL13-213ENST00000565571 WDR97A6NE52 1622 aa25.61■■□□□ 1.69
RPL13-213ENST00000565571 MAGI1Q96QZ7 1491 aaPredicted RBP25.59■■□□□ 1.69
RPL13-213ENST00000565571 GAPVD1Q14C86 1478 aa25.55■■□□□ 1.68
RPL13-213ENST00000565571 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
RPL13-213ENST00000565571 SYNJ2O15056 1496 aa25.53■■□□□ 1.68
RPL13-213ENST00000565571 ABCA10Q8WWZ4 1543 aa25.52■■□□□ 1.68
RPL13-213ENST00000565571 SYNJ1O43426 1573 aa25.47■■□□□ 1.67
RPL13-213ENST00000565571 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
RPL13-213ENST00000565571 ABCA5Q8WWZ7 1642 aa25.43■■□□□ 1.66
RPL13-213ENST00000565571 WRNQ14191 1432 aaPredicted RBP eCLIP25.43■■□□□ 1.66
RPL13-213ENST00000565571 PBRM1Q86U86 1689 aa25.42■■□□□ 1.66
RPL13-213ENST00000565571 TOP2BQ02880 1626 aa25.34■■□□□ 1.65
RPL13-213ENST00000565571 BIVM-ERCC5R4GMW8 1640 aa25.31■■□□□ 1.64
RPL13-213ENST00000565571 GRIN2AQ12879 1464 aa25.29■■□□□ 1.64
RPL13-213ENST00000565571 ADAMTS12P58397 1594 aa25.23■■□□□ 1.63
RPL13-213ENST00000565571 FHAD1B1AJZ9 1412 aa25.22■■□□□ 1.63
RPL13-213ENST00000565571 NUP160Q12769 1436 aa25.22■■□□□ 1.63
RPL13-213ENST00000565571 ERCC6L2Q5T890 1561 aa25.21■■□□□ 1.63
RPL13-213ENST00000565571 CEP170Q5SW79 1584 aa25.2■■□□□ 1.62
RPL13-213ENST00000565571 ERICH3Q5RHP9 1530 aa25.16■■□□□ 1.62
RPL13-213ENST00000565571 JPH4Q96JJ6 628 aa25.05■■□□□ 1.6
RPL13-213ENST00000565571 SHROOM2Q13796 1616 aa25.04■■□□□ 1.6
RPL13-213ENST00000565571 PRG4Q92954 1404 aaPredicted RBP25.01■■□□□ 1.59
RPL13-213ENST00000565571 IGF1RP08069 1367 aa24.98■■□□□ 1.59
RPL13-213ENST00000565571 KIF27Q86VH2 1401 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms