RNA–Protein interactions for RNA: ENST00000565551.5

POLR3E-215, Transcript of RNA polymerase III subunit E, humanhuman

TSL 5

Gene POLR3E, Length 645 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3E-215ENST00000565551 NISCHQ9Y2I1 1504 aa36.1■■■■□ 3.37
POLR3E-215ENST00000565551 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
POLR3E-215ENST00000565551 ABCC9O60706 1549 aa31.12■■■□□ 2.57
POLR3E-215ENST00000565551 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
POLR3E-215ENST00000565551 ZCCHC6Q5VYS8 1495 aaKnown RBP30.11■■■□□ 2.41
POLR3E-215ENST00000565551 NACADO15069 1562 aa30.09■■■□□ 2.41
POLR3E-215ENST00000565551 RB1CC1Q8TDY2 1594 aa30.09■■■□□ 2.41
POLR3E-215ENST00000565551 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
POLR3E-215ENST00000565551 DCAF1Q9Y4B6 1507 aa29.91■■■□□ 2.38
POLR3E-215ENST00000565551 UNC13AQ9UPW8 1703 aa29.3■■■□□ 2.28
POLR3E-215ENST00000565551 SCRIBQ14160 1630 aa29.21■■■□□ 2.27
POLR3E-215ENST00000565551 PABPN1Q86U42 306 aaKnown RBP eCLIP29.1■■■□□ 2.25
POLR3E-215ENST00000565551 BICRAQ9NZM4 1560 aa29.05■■■□□ 2.24
POLR3E-215ENST00000565551 SHROOM4Q9ULL8 1493 aa28.91■■■□□ 2.22
POLR3E-215ENST00000565551 DNAJC5BQ9UF47 199 aa28.65■■■□□ 2.18
POLR3E-215ENST00000565551 EIF4G1Q04637 1599 aaKnown RBP28.33■■■□□ 2.13
POLR3E-215ENST00000565551 CC2D2AQ9P2K1 1620 aa28.16■■■□□ 2.1
POLR3E-215ENST00000565551 CECR2Q9BXF3 1484 aa28.04■■■□□ 2.08
POLR3E-215ENST00000565551 BAZ1AQ9NRL2 1556 aaPredicted RBP28.02■■■□□ 2.08
POLR3E-215ENST00000565551 SMARCA4P51532 1647 aa27.96■■■□□ 2.07
POLR3E-215ENST00000565551 SMARCA2P51531 1590 aa27.8■■■□□ 2.04
POLR3E-215ENST00000565551 MROH2BQ7Z745 1585 aa27.78■■■□□ 2.04
POLR3E-215ENST00000565551 ATAD2BQ9ULI0 1458 aa27.76■■■□□ 2.04
POLR3E-215ENST00000565551 NCAPD3P42695 1498 aa27.74■■■□□ 2.03
POLR3E-215ENST00000565551 PEG3Q9GZU2 1588 aa27.7■■■□□ 2.03
POLR3E-215ENST00000565551 HMGXB3Q12766 1538 aa27.63■■■□□ 2.01
POLR3E-215ENST00000565551 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
POLR3E-215ENST00000565551 RSF1Q96T23 1441 aaPredicted RBP27.56■■■□□ 2
POLR3E-215ENST00000565551 WIZO95785 1651 aa27.5■■□□□ 1.99
POLR3E-215ENST00000565551 TOP2AP11388 1531 aaKnown RBP27.27■■□□□ 1.96
POLR3E-215ENST00000565551 SUPT5HO00267 1087 aaKnown RBP27.06■■□□□ 1.92
POLR3E-215ENST00000565551 LAMC3Q9Y6N6 1575 aa27.01■■□□□ 1.91
POLR3E-215ENST00000565551 CADPSQ9ULU8 1353 aa26.96■■□□□ 1.91
POLR3E-215ENST00000565551 NESP48681 1621 aa26.94■■□□□ 1.9
POLR3E-215ENST00000565551 CCDC88BA6NC98 1476 aa26.92■■□□□ 1.9
POLR3E-215ENST00000565551 ERCC6Q03468 1493 aa26.88■■□□□ 1.89
POLR3E-215ENST00000565551 PDS5BQ9NTI5 1447 aa26.84■■□□□ 1.89
POLR3E-215ENST00000565551 CFTRP13569 1480 aa26.81■■□□□ 1.88
POLR3E-215ENST00000565551 KIF21AQ7Z4S6 1674 aa26.66■■□□□ 1.86
POLR3E-215ENST00000565551 PRDM2Q13029 1718 aa26.65■■□□□ 1.86
POLR3E-215ENST00000565551 FANCD2Q9BXW9 1451 aa26.63■■□□□ 1.85
POLR3E-215ENST00000565551 CEP164Q9UPV0 1460 aa26.62■■□□□ 1.85
POLR3E-215ENST00000565551 THOC2Q8NI27 1593 aaKnown RBP26.52■■□□□ 1.84
POLR3E-215ENST00000565551 MRC2Q9UBG0 1479 aa26.52■■□□□ 1.84
POLR3E-215ENST00000565551 CUX2O14529 1486 aa26.51■■□□□ 1.83
POLR3E-215ENST00000565551 DNAJC5Q9H3Z4 198 aa26.4■■□□□ 1.82
POLR3E-215ENST00000565551 WDR62O43379 1518 aa26.39■■□□□ 1.82
POLR3E-215ENST00000565551 ABCC8Q09428 1581 aa26.32■■□□□ 1.8
POLR3E-215ENST00000565551 URB2Q14146 1524 aaKnown RBP26.31■■□□□ 1.8
POLR3E-215ENST00000565551 DNMBPQ6XZF7 1577 aa26.23■■□□□ 1.79
POLR3E-215ENST00000565551 TOPBP1Q92547 1522 aa26.22■■□□□ 1.79
POLR3E-215ENST00000565551 CUX1P39880 1505 aa26.06■■□□□ 1.76
POLR3E-215ENST00000565551 IFT140Q96RY7 1462 aa26.05■■□□□ 1.76
POLR3E-215ENST00000565551 WRNQ14191 1432 aaPredicted RBP eCLIP26.04■■□□□ 1.76
POLR3E-215ENST00000565551 POLA1P09884 1462 aaPredicted RBP26.01■■□□□ 1.75
POLR3E-215ENST00000565551 FGD5Q6ZNL6 1462 aa25.98■■□□□ 1.75
POLR3E-215ENST00000565551 TOP2BQ02880 1626 aa25.93■■□□□ 1.74
POLR3E-215ENST00000565551 SOGA1O94964 1423 aa25.93■■□□□ 1.74
POLR3E-215ENST00000565551 BIVM-ERCC5R4GMW8 1640 aa25.92■■□□□ 1.74
POLR3E-215ENST00000565551 TARBP1Q13395 1621 aaKnown RBP25.89■■□□□ 1.74
POLR3E-215ENST00000565551 SYNJ1O43426 1573 aa25.89■■□□□ 1.73
POLR3E-215ENST00000565551 RAD54L2Q9Y4B4 1467 aa25.86■■□□□ 1.73
POLR3E-215ENST00000565551 ZNF608Q9ULD9 1512 aaPredicted RBP25.83■■□□□ 1.72
POLR3E-215ENST00000565551 WDR97A6NE52 1622 aa25.8■■□□□ 1.72
POLR3E-215ENST00000565551 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
POLR3E-215ENST00000565551 ABCA10Q8WWZ4 1543 aa25.75■■□□□ 1.71
POLR3E-215ENST00000565551 TDRD9Q8NDG6 1382 aaKnown RBP25.73■■□□□ 1.71
POLR3E-215ENST00000565551 AQRO60306 1485 aaKnown RBP eCLIP25.72■■□□□ 1.715e-9■■■■□ 25.9
POLR3E-215ENST00000565551 GAPVD1Q14C86 1478 aa25.64■■□□□ 1.69
POLR3E-215ENST00000565551 GRIN2BQ13224 1484 aa25.62■■□□□ 1.69
POLR3E-215ENST00000565551 ABCA5Q8WWZ7 1642 aa25.6■■□□□ 1.69
POLR3E-215ENST00000565551 TRIM41Q8WV44 630 aa25.59■■□□□ 1.69
POLR3E-215ENST00000565551 PBRM1Q86U86 1689 aa25.55■■□□□ 1.68
POLR3E-215ENST00000565551 MAGI1Q96QZ7 1491 aaPredicted RBP25.54■■□□□ 1.68
POLR3E-215ENST00000565551 SNAPC4Q5SXM2 1469 aa25.53■■□□□ 1.68
POLR3E-215ENST00000565551 KIF27Q86VH2 1401 aa25.51■■□□□ 1.67
POLR3E-215ENST00000565551 OSCARQ8IYS5 282 aa25.47■■□□□ 1.67
POLR3E-215ENST00000565551 ERICH3Q5RHP9 1530 aa25.47■■□□□ 1.67
POLR3E-215ENST00000565551 FBLN2P98095 1184 aa25.46■■□□□ 1.67
POLR3E-215ENST00000565551 CHMP7Q8WUX9 453 aaPredicted RBP25.44■■□□□ 1.66
POLR3E-215ENST00000565551 SYNJ2O15056 1496 aa25.42■■□□□ 1.66
POLR3E-215ENST00000565551 CHD1O14646 1710 aa25.4■■□□□ 1.66
POLR3E-215ENST00000565551 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
POLR3E-215ENST00000565551 ADAMTS12P58397 1594 aa25.35■■□□□ 1.65
POLR3E-215ENST00000565551 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
POLR3E-215ENST00000565551 IGF1RP08069 1367 aa25.31■■□□□ 1.64
POLR3E-215ENST00000565551 CUL7Q14999 1698 aa25.29■■□□□ 1.64
POLR3E-215ENST00000565551 GRIN2AQ12879 1464 aa25.27■■□□□ 1.64
POLR3E-215ENST00000565551 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.63
POLR3E-215ENST00000565551 RUSC2Q8N2Y8 1516 aa25.2■■□□□ 1.62
POLR3E-215ENST00000565551 EEA1Q15075 1411 aa25.18■■□□□ 1.62
POLR3E-215ENST00000565551 NUP160Q12769 1436 aa25.13■■□□□ 1.61
POLR3E-215ENST00000565551 CLASP1Q7Z460 1538 aa25.13■■□□□ 1.61
POLR3E-215ENST00000565551 CEP170Q5SW79 1584 aa25.09■■□□□ 1.61
POLR3E-215ENST00000565551 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
POLR3E-215ENST00000565551 CSRNP3Q8WYN3 585 aa25.07■■□□□ 1.6
POLR3E-215ENST00000565551 PRXQ9BXM0 1461 aa25■■□□□ 1.59
POLR3E-215ENST00000565551 ARHGEF11O15085 1522 aa25■■□□□ 1.59
POLR3E-215ENST00000565551 FAM9AQ8IZU1 332 aaPredicted RBP24.99■■□□□ 1.59
POLR3E-215ENST00000565551 KIAA0586Q9BVV6 1533 aa24.97■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms