RNA–Protein interactions for RNA: ENST00000565514.1

CMC2-210, Transcript of C-X9-C motif containing 2, humanhuman

TSL 3

Gene CMC2, Length 262 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-210ENST00000565514 NISCHQ9Y2I1 1504 aa35.04■■■■□ 3.2
CMC2-210ENST00000565514 ABCC9O60706 1549 aa31.72■■■□□ 2.67
CMC2-210ENST00000565514 CCDC180Q9P1Z9 1646 aa31.55■■■□□ 2.64
CMC2-210ENST00000565514 RB1CC1Q8TDY2 1594 aa30.13■■■□□ 2.41
CMC2-210ENST00000565514 NACADO15069 1562 aa29.86■■■□□ 2.37
CMC2-210ENST00000565514 DNAJC5BQ9UF47 199 aa29.85■■■□□ 2.37
CMC2-210ENST00000565514 DCAF8L2P0C7V8 631 aa29.67■■■□□ 2.34
CMC2-210ENST00000565514 PABPN1Q86U42 306 aaKnown RBP eCLIP29.48■■■□□ 2.31
CMC2-210ENST00000565514 UNC13AQ9UPW8 1703 aa29.39■■■□□ 2.3
CMC2-210ENST00000565514 MYO15BQ96JP2 1530 aa29.39■■■□□ 2.3
CMC2-210ENST00000565514 BICRAQ9NZM4 1560 aa29.21■■■□□ 2.27
CMC2-210ENST00000565514 ZCCHC6Q5VYS8 1495 aaKnown RBP29.01■■■□□ 2.23
CMC2-210ENST00000565514 DCAF1Q9Y4B6 1507 aa28.94■■■□□ 2.22
CMC2-210ENST00000565514 SHROOM4Q9ULL8 1493 aa28.88■■■□□ 2.21
CMC2-210ENST00000565514 SCRIBQ14160 1630 aa28.73■■■□□ 2.19
CMC2-210ENST00000565514 CC2D2AQ9P2K1 1620 aa28.64■■■□□ 2.18
CMC2-210ENST00000565514 CECR2Q9BXF3 1484 aa28.61■■■□□ 2.17
CMC2-210ENST00000565514 EIF4G1Q04637 1599 aaKnown RBP28.54■■■□□ 2.16
CMC2-210ENST00000565514 DNAJC5Q9H3Z4 198 aa27.59■■■□□ 2.01
CMC2-210ENST00000565514 NCAPD3P42695 1498 aa27.56■■■□□ 2
CMC2-210ENST00000565514 ERCC6Q03468 1493 aa27.45■■□□□ 1.99
CMC2-210ENST00000565514 CUX2O14529 1486 aa27.44■■□□□ 1.98
CMC2-210ENST00000565514 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
CMC2-210ENST00000565514 SMARCA2P51531 1590 aa27.39■■□□□ 1.98
CMC2-210ENST00000565514 SMARCA4P51532 1647 aa27.38■■□□□ 1.97
CMC2-210ENST00000565514 HMGXB3Q12766 1538 aa27.36■■□□□ 1.97
CMC2-210ENST00000565514 BAZ1AQ9NRL2 1556 aaPredicted RBP27.24■■□□□ 1.95
CMC2-210ENST00000565514 BAZ1BQ9UIG0 1483 aaKnown RBP27.2■■□□□ 1.95
CMC2-210ENST00000565514 NESP48681 1621 aa27.18■■□□□ 1.94
CMC2-210ENST00000565514 PEG3Q9GZU2 1588 aa27.11■■□□□ 1.93
CMC2-210ENST00000565514 LAMC3Q9Y6N6 1575 aa26.99■■□□□ 1.91
CMC2-210ENST00000565514 MROH2BQ7Z745 1585 aa26.98■■□□□ 1.91
CMC2-210ENST00000565514 THOC2Q8NI27 1593 aaKnown RBP26.96■■□□□ 1.91
CMC2-210ENST00000565514 PDS5BQ9NTI5 1447 aa26.85■■□□□ 1.89
CMC2-210ENST00000565514 KIF21AQ7Z4S6 1674 aa26.83■■□□□ 1.89
CMC2-210ENST00000565514 CADPSQ9ULU8 1353 aa26.71■■□□□ 1.87
CMC2-210ENST00000565514 WIZO95785 1651 aa26.65■■□□□ 1.86
CMC2-210ENST00000565514 MRC2Q9UBG0 1479 aa26.63■■□□□ 1.85
CMC2-210ENST00000565514 WDR62O43379 1518 aa26.56■■□□□ 1.84
CMC2-210ENST00000565514 CEP164Q9UPV0 1460 aa26.49■■□□□ 1.83
CMC2-210ENST00000565514 FANCD2Q9BXW9 1451 aa26.43■■□□□ 1.82
CMC2-210ENST00000565514 CFTRP13569 1480 aa26.37■■□□□ 1.81
CMC2-210ENST00000565514 RSF1Q96T23 1441 aaPredicted RBP26.36■■□□□ 1.81
CMC2-210ENST00000565514 TRIM41Q8WV44 630 aa26.34■■□□□ 1.81
CMC2-210ENST00000565514 TOP2AP11388 1531 aaKnown RBP26.34■■□□□ 1.81
CMC2-210ENST00000565514 URB2Q14146 1524 aaKnown RBP26.2■■□□□ 1.79
CMC2-210ENST00000565514 OSCARQ8IYS5 282 aa26.14■■□□□ 1.78
CMC2-210ENST00000565514 PRDM2Q13029 1718 aa26.1■■□□□ 1.77
CMC2-210ENST00000565514 CCDC88BA6NC98 1476 aa26.01■■□□□ 1.75
CMC2-210ENST00000565514 IFT140Q96RY7 1462 aa25.97■■□□□ 1.75
CMC2-210ENST00000565514 ZNF608Q9ULD9 1512 aaPredicted RBP25.91■■□□□ 1.74
CMC2-210ENST00000565514 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
CMC2-210ENST00000565514 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
CMC2-210ENST00000565514 RIMBP3CA6NJZ7 1639 aa25.82■■□□□ 1.72
CMC2-210ENST00000565514 RIMBP3BA6NNM3 1639 aa25.82■■□□□ 1.72
CMC2-210ENST00000565514 RIMBP3Q9UFD9 1639 aa25.82■■□□□ 1.72
CMC2-210ENST00000565514 DNMBPQ6XZF7 1577 aa25.81■■□□□ 1.72
CMC2-210ENST00000565514 EIF4G3O43432 1585 aaKnown RBP25.78■■□□□ 1.72
CMC2-210ENST00000565514 ARHGEF11O15085 1522 aa25.73■■□□□ 1.71
CMC2-210ENST00000565514 TARBP1Q13395 1621 aaKnown RBP25.67■■□□□ 1.7
CMC2-210ENST00000565514 AQRO60306 1485 aaKnown RBP eCLIP25.66■■□□□ 1.7
CMC2-210ENST00000565514 POLA1P09884 1462 aaPredicted RBP25.62■■□□□ 1.69
CMC2-210ENST00000565514 CHD1O14646 1710 aa25.61■■□□□ 1.69
CMC2-210ENST00000565514 FBLN2P98095 1184 aa25.56■■□□□ 1.68
CMC2-210ENST00000565514 CYB5RLQ6IPT4 315 aa25.53■■□□□ 1.68
CMC2-210ENST00000565514 RAD54L2Q9Y4B4 1467 aa25.52■■□□□ 1.68
CMC2-210ENST00000565514 SOGA1O94964 1423 aa25.5■■□□□ 1.67
CMC2-210ENST00000565514 TDRD9Q8NDG6 1382 aaKnown RBP25.47■■□□□ 1.67
CMC2-210ENST00000565514 ARAP1Q96P48 1450 aa25.45■■□□□ 1.66
CMC2-210ENST00000565514 FGD5Q6ZNL6 1462 aa25.44■■□□□ 1.66
CMC2-210ENST00000565514 WDR97A6NE52 1622 aa25.44■■□□□ 1.66
CMC2-210ENST00000565514 SNAPC4Q5SXM2 1469 aa25.41■■□□□ 1.66
CMC2-210ENST00000565514 CUX1P39880 1505 aa25.37■■□□□ 1.65
CMC2-210ENST00000565514 MAGI1Q96QZ7 1491 aaPredicted RBP25.34■■□□□ 1.65
CMC2-210ENST00000565514 TRHP20396 242 aaPredicted RBP25.34■■□□□ 1.65
CMC2-210ENST00000565514 CHMP7Q8WUX9 453 aaPredicted RBP25.34■■□□□ 1.65
CMC2-210ENST00000565514 GRIN2BQ13224 1484 aa25.33■■□□□ 1.65
CMC2-210ENST00000565514 SYNJ1O43426 1573 aa25.32■■□□□ 1.64
CMC2-210ENST00000565514 CLASP1Q7Z460 1538 aa25.32■■□□□ 1.64
CMC2-210ENST00000565514 SYNJ2O15056 1496 aa25.27■■□□□ 1.64
CMC2-210ENST00000565514 GAPVD1Q14C86 1478 aa25.2■■□□□ 1.62
CMC2-210ENST00000565514 PBRM1Q86U86 1689 aa25.2■■□□□ 1.62
CMC2-210ENST00000565514 ABCA10Q8WWZ4 1543 aa25.14■■□□□ 1.62
CMC2-210ENST00000565514 ABCA5Q8WWZ7 1642 aa25.12■■□□□ 1.61
CMC2-210ENST00000565514 SUPT5HO00267 1087 aaKnown RBP25.07■■□□□ 1.6
CMC2-210ENST00000565514 WRNQ14191 1432 aaPredicted RBP eCLIP25.03■■□□□ 1.6
CMC2-210ENST00000565514 GRIN2AQ12879 1464 aa24.99■■□□□ 1.59
CMC2-210ENST00000565514 ADAMTS12P58397 1594 aa24.96■■□□□ 1.59
CMC2-210ENST00000565514 TOP2BQ02880 1626 aa24.94■■□□□ 1.58
CMC2-210ENST00000565514 BIVM-ERCC5R4GMW8 1640 aa24.93■■□□□ 1.58
CMC2-210ENST00000565514 NUP160Q12769 1436 aa24.9■■□□□ 1.58
CMC2-210ENST00000565514 CEP170Q5SW79 1584 aa24.89■■□□□ 1.58
CMC2-210ENST00000565514 ERCC6L2Q5T890 1561 aa24.88■■□□□ 1.57
CMC2-210ENST00000565514 FHAD1B1AJZ9 1412 aa24.88■■□□□ 1.57
CMC2-210ENST00000565514 ERICH3Q5RHP9 1530 aa24.83■■□□□ 1.57
CMC2-210ENST00000565514 SHROOM2Q13796 1616 aa24.81■■□□□ 1.56
CMC2-210ENST00000565514 AEBP2Q6ZN18 517 aaPredicted RBP24.77■■□□□ 1.56
CMC2-210ENST00000565514 PRG4Q92954 1404 aaPredicted RBP24.69■■□□□ 1.54
CMC2-210ENST00000565514 JPH4Q96JJ6 628 aa24.63■■□□□ 1.53
CMC2-210ENST00000565514 RUSC2Q8N2Y8 1516 aa24.61■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms