RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 NISCHQ9Y2I1 1504 aa33.25■■■□□ 2.91
CCNDBP1-206ENST00000565296 CCDC180Q9P1Z9 1646 aa29.35■■■□□ 2.29
CCNDBP1-206ENST00000565296 ABCC9O60706 1549 aa28.54■■■□□ 2.16
CCNDBP1-206ENST00000565296 ZCCHC6Q5VYS8 1495 aaKnown RBP27.76■■■□□ 2.03
CCNDBP1-206ENST00000565296 DCAF8L2P0C7V8 631 aa27.67■■■□□ 2.02
CCNDBP1-206ENST00000565296 NACADO15069 1562 aa27.57■■■□□ 2
CCNDBP1-206ENST00000565296 MYO15BQ96JP2 1530 aa27.51■■□□□ 1.99
CCNDBP1-206ENST00000565296 RB1CC1Q8TDY2 1594 aa27.51■■□□□ 1.99
CCNDBP1-206ENST00000565296 DCAF1Q9Y4B6 1507 aa27.51■■□□□ 1.99
CCNDBP1-206ENST00000565296 UNC13AQ9UPW8 1703 aa26.87■■□□□ 1.89
CCNDBP1-206ENST00000565296 SCRIBQ14160 1630 aa26.87■■□□□ 1.89
CCNDBP1-206ENST00000565296 PABPN1Q86U42 306 aaKnown RBP eCLIP26.76■■□□□ 1.88
CCNDBP1-206ENST00000565296 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
CCNDBP1-206ENST00000565296 SHROOM4Q9ULL8 1493 aa26.48■■□□□ 1.83
CCNDBP1-206ENST00000565296 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
CCNDBP1-206ENST00000565296 EIF4G1Q04637 1599 aaKnown RBP25.99■■□□□ 1.75
CCNDBP1-206ENST00000565296 CECR2Q9BXF3 1484 aa25.92■■□□□ 1.74
CCNDBP1-206ENST00000565296 CC2D2AQ9P2K1 1620 aa25.8■■□□□ 1.72
CCNDBP1-206ENST00000565296 BAZ1AQ9NRL2 1556 aaPredicted RBP25.72■■□□□ 1.71
CCNDBP1-206ENST00000565296 SMARCA4P51532 1647 aa25.71■■□□□ 1.71
CCNDBP1-206ENST00000565296 MROH2BQ7Z745 1585 aa25.65■■□□□ 1.7
CCNDBP1-206ENST00000565296 ATAD2BQ9ULI0 1458 aa25.55■■□□□ 1.68
CCNDBP1-206ENST00000565296 NCAPD3P42695 1498 aa25.48■■□□□ 1.67
CCNDBP1-206ENST00000565296 RSF1Q96T23 1441 aaPredicted RBP25.48■■□□□ 1.67
CCNDBP1-206ENST00000565296 PEG3Q9GZU2 1588 aa25.47■■□□□ 1.67
CCNDBP1-206ENST00000565296 SMARCA2P51531 1590 aa25.47■■□□□ 1.67
CCNDBP1-206ENST00000565296 WIZO95785 1651 aa25.36■■□□□ 1.65
CCNDBP1-206ENST00000565296 HMGXB3Q12766 1538 aa25.34■■□□□ 1.65
CCNDBP1-206ENST00000565296 BAZ1BQ9UIG0 1483 aaKnown RBP25.32■■□□□ 1.64
CCNDBP1-206ENST00000565296 TOP2AP11388 1531 aaKnown RBP25.1■■□□□ 1.61
CCNDBP1-206ENST00000565296 SUPT5HO00267 1087 aaKnown RBP25.04■■□□□ 1.6
CCNDBP1-206ENST00000565296 CCDC88BA6NC98 1476 aa24.84■■□□□ 1.57
CCNDBP1-206ENST00000565296 NESP48681 1621 aa24.8■■□□□ 1.56
CCNDBP1-206ENST00000565296 CADPSQ9ULU8 1353 aa24.75■■□□□ 1.55
CCNDBP1-206ENST00000565296 LAMC3Q9Y6N6 1575 aa24.7■■□□□ 1.55
CCNDBP1-206ENST00000565296 CFTRP13569 1480 aa24.67■■□□□ 1.54
CCNDBP1-206ENST00000565296 PDS5BQ9NTI5 1447 aa24.55■■□□□ 1.52
CCNDBP1-206ENST00000565296 ERCC6Q03468 1493 aa24.52■■□□□ 1.52
CCNDBP1-206ENST00000565296 FANCD2Q9BXW9 1451 aa24.46■■□□□ 1.51
CCNDBP1-206ENST00000565296 KIF21AQ7Z4S6 1674 aa24.43■■□□□ 1.5
CCNDBP1-206ENST00000565296 CEP164Q9UPV0 1460 aa24.37■■□□□ 1.49
CCNDBP1-206ENST00000565296 PRDM2Q13029 1718 aa24.36■■□□□ 1.49
CCNDBP1-206ENST00000565296 THOC2Q8NI27 1593 aaKnown RBP24.31■■□□□ 1.48
CCNDBP1-206ENST00000565296 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
CCNDBP1-206ENST00000565296 URB2Q14146 1524 aaKnown RBP24.22■■□□□ 1.47
CCNDBP1-206ENST00000565296 WDR62O43379 1518 aa24.21■■□□□ 1.47
CCNDBP1-206ENST00000565296 CUX2O14529 1486 aa24.16■■□□□ 1.46
CCNDBP1-206ENST00000565296 TOPBP1Q92547 1522 aa24.1■■□□□ 1.45
CCNDBP1-206ENST00000565296 DNMBPQ6XZF7 1577 aa24.06■■□□□ 1.44
CCNDBP1-206ENST00000565296 ABCC8Q09428 1581 aa24.06■■□□□ 1.44
CCNDBP1-206ENST00000565296 CUX1P39880 1505 aa24.04■■□□□ 1.44
CCNDBP1-206ENST00000565296 WRNQ14191 1432 aaPredicted RBP eCLIP23.98■■□□□ 1.43
CCNDBP1-206ENST00000565296 POLA1P09884 1462 aaPredicted RBP23.93■■□□□ 1.42
CCNDBP1-206ENST00000565296 SYNJ1O43426 1573 aa23.91■■□□□ 1.42
CCNDBP1-206ENST00000565296 FGD5Q6ZNL6 1462 aa23.9■■□□□ 1.42
CCNDBP1-206ENST00000565296 TOP2BQ02880 1626 aa23.87■■□□□ 1.41
CCNDBP1-206ENST00000565296 IFT140Q96RY7 1462 aa23.85■■□□□ 1.41
CCNDBP1-206ENST00000565296 BIVM-ERCC5R4GMW8 1640 aa23.84■■□□□ 1.41
CCNDBP1-206ENST00000565296 RAD54L2Q9Y4B4 1467 aa23.84■■□□□ 1.41
CCNDBP1-206ENST00000565296 SOGA1O94964 1423 aa23.83■■□□□ 1.41
CCNDBP1-206ENST00000565296 TARBP1Q13395 1621 aaKnown RBP23.81■■□□□ 1.4
CCNDBP1-206ENST00000565296 ZNF608Q9ULD9 1512 aaPredicted RBP23.78■■□□□ 1.4
CCNDBP1-206ENST00000565296 TDRD9Q8NDG6 1382 aaKnown RBP23.69■■□□□ 1.38
CCNDBP1-206ENST00000565296 ABCA10Q8WWZ4 1543 aa23.68■■□□□ 1.38
CCNDBP1-206ENST00000565296 AQRO60306 1485 aaKnown RBP eCLIP23.68■■□□□ 1.382e-6■■□□□ 13.6
CCNDBP1-206ENST00000565296 WDR97A6NE52 1622 aa23.64■■□□□ 1.38
CCNDBP1-206ENST00000565296 EIF4G3O43432 1585 aaKnown RBP23.64■■□□□ 1.37
CCNDBP1-206ENST00000565296 TRIM41Q8WV44 630 aa23.61■■□□□ 1.37
CCNDBP1-206ENST00000565296 CHIC1Q5VXU3 224 aa23.56■■□□□ 1.36
CCNDBP1-206ENST00000565296 GAPVD1Q14C86 1478 aa23.55■■□□□ 1.36
CCNDBP1-206ENST00000565296 ABCA5Q8WWZ7 1642 aa23.54■■□□□ 1.36
CCNDBP1-206ENST00000565296 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
CCNDBP1-206ENST00000565296 KIF27Q86VH2 1401 aa23.44■■□□□ 1.34
CCNDBP1-206ENST00000565296 SNAPC4Q5SXM2 1469 aa23.44■■□□□ 1.34
CCNDBP1-206ENST00000565296 PBRM1Q86U86 1689 aa23.4■■□□□ 1.34
CCNDBP1-206ENST00000565296 MAGI1Q96QZ7 1491 aaPredicted RBP23.4■■□□□ 1.34
CCNDBP1-206ENST00000565296 RUSC2Q8N2Y8 1516 aa23.39■■□□□ 1.33
CCNDBP1-206ENST00000565296 ERICH3Q5RHP9 1530 aa23.38■■□□□ 1.33
CCNDBP1-206ENST00000565296 IGF1RP08069 1367 aa23.37■■□□□ 1.33
CCNDBP1-206ENST00000565296 SYNJ2O15056 1496 aa23.31■■□□□ 1.32
CCNDBP1-206ENST00000565296 FBLN2P98095 1184 aa23.31■■□□□ 1.32
CCNDBP1-206ENST00000565296 ADAMTS12P58397 1594 aa23.3■■□□□ 1.32
CCNDBP1-206ENST00000565296 CHMP7Q8WUX9 453 aaPredicted RBP23.29■■□□□ 1.32
CCNDBP1-206ENST00000565296 FHAD1B1AJZ9 1412 aa23.28■■□□□ 1.32
CCNDBP1-206ENST00000565296 OSCARQ8IYS5 282 aa23.25■■□□□ 1.31
CCNDBP1-206ENST00000565296 CHD1O14646 1710 aa23.24■■□□□ 1.31
CCNDBP1-206ENST00000565296 GRIN2AQ12879 1464 aa23.2■■□□□ 1.3
CCNDBP1-206ENST00000565296 CARMIL1Q5VZK9 1371 aa23.2■■□□□ 1.3
CCNDBP1-206ENST00000565296 CUL7Q14999 1698 aa23.18■■□□□ 1.3
CCNDBP1-206ENST00000565296 EEA1Q15075 1411 aa23.16■■□□□ 1.3
CCNDBP1-206ENST00000565296 DNAJC5Q9H3Z4 198 aa23.15■■□□□ 1.3
CCNDBP1-206ENST00000565296 FAM9AQ8IZU1 332 aaPredicted RBP23.15■■□□□ 1.3
CCNDBP1-206ENST00000565296 CSRNP3Q8WYN3 585 aa23.15■■□□□ 1.3
CCNDBP1-206ENST00000565296 PRXQ9BXM0 1461 aa23.11■■□□□ 1.29
CCNDBP1-206ENST00000565296 NUP160Q12769 1436 aa23.1■■□□□ 1.29
CCNDBP1-206ENST00000565296 CEP170Q5SW79 1584 aa23.08■■□□□ 1.29
CCNDBP1-206ENST00000565296 RAPGEF2Q9Y4G8 1499 aa23.08■■□□□ 1.28
CCNDBP1-206ENST00000565296 CLASP1Q7Z460 1538 aa23.06■■□□□ 1.28
CCNDBP1-206ENST00000565296 KIAA0586Q9BVV6 1533 aa22.94■■□□□ 1.26
CCNDBP1-206ENST00000565296 KIF21BO75037 1637 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 272.6 ms