RNA–Protein interactions for RNA: ENST00000565198.1

LMF1-206, Transcript of lipase maturation factor 1, humanhuman

TSL 4

Gene LMF1, Length 604 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMF1-206ENST00000565198 NISCHQ9Y2I1 1504 aa31■■■□□ 2.55
LMF1-206ENST00000565198 CCDC180Q9P1Z9 1646 aa27.49■■□□□ 1.99
LMF1-206ENST00000565198 ABCC9O60706 1549 aa26.95■■□□□ 1.9
LMF1-206ENST00000565198 DCAF8L2P0C7V8 631 aa25.9■■□□□ 1.74
LMF1-206ENST00000565198 ZCCHC6Q5VYS8 1495 aaKnown RBP25.84■■□□□ 1.73
LMF1-206ENST00000565198 RB1CC1Q8TDY2 1594 aa25.83■■□□□ 1.73
LMF1-206ENST00000565198 NACADO15069 1562 aa25.82■■□□□ 1.72
LMF1-206ENST00000565198 MYO15BQ96JP2 1530 aa25.64■■□□□ 1.7
LMF1-206ENST00000565198 DCAF1Q9Y4B6 1507 aa25.58■■□□□ 1.69
LMF1-206ENST00000565198 UNC13AQ9UPW8 1703 aa25.41■■□□□ 1.66
LMF1-206ENST00000565198 PABPN1Q86U42 306 aaKnown RBP eCLIP25.22■■□□□ 1.63
LMF1-206ENST00000565198 SCRIBQ14160 1630 aa25.19■■□□□ 1.62
LMF1-206ENST00000565198 BICRAQ9NZM4 1560 aa25.18■■□□□ 1.62
LMF1-206ENST00000565198 DNAJC5BQ9UF47 199 aa24.79■■□□□ 1.56
LMF1-206ENST00000565198 SHROOM4Q9ULL8 1493 aa24.7■■□□□ 1.54
LMF1-206ENST00000565198 EIF4G1Q04637 1599 aaKnown RBP24.45■■□□□ 1.5
LMF1-206ENST00000565198 CC2D2AQ9P2K1 1620 aa24.36■■□□□ 1.49
LMF1-206ENST00000565198 CECR2Q9BXF3 1484 aa24.24■■□□□ 1.47
LMF1-206ENST00000565198 SMARCA4P51532 1647 aa24.06■■□□□ 1.44
LMF1-206ENST00000565198 BAZ1AQ9NRL2 1556 aaPredicted RBP23.98■■□□□ 1.43
LMF1-206ENST00000565198 MROH2BQ7Z745 1585 aa23.96■■□□□ 1.43
LMF1-206ENST00000565198 ATAD2BQ9ULI0 1458 aa23.9■■□□□ 1.42
LMF1-206ENST00000565198 NCAPD3P42695 1498 aa23.85■■□□□ 1.41
LMF1-206ENST00000565198 SMARCA2P51531 1590 aa23.81■■□□□ 1.4
LMF1-206ENST00000565198 PEG3Q9GZU2 1588 aa23.78■■□□□ 1.4
LMF1-206ENST00000565198 HMGXB3Q12766 1538 aa23.72■■□□□ 1.39
LMF1-206ENST00000565198 WIZO95785 1651 aa23.72■■□□□ 1.39
LMF1-206ENST00000565198 BAZ1BQ9UIG0 1483 aaKnown RBP23.68■■□□□ 1.38
LMF1-206ENST00000565198 RSF1Q96T23 1441 aaPredicted RBP23.67■■□□□ 1.38
LMF1-206ENST00000565198 TOP2AP11388 1531 aaKnown RBP23.38■■□□□ 1.33
LMF1-206ENST00000565198 NESP48681 1621 aa23.37■■□□□ 1.33
LMF1-206ENST00000565198 LAMC3Q9Y6N6 1575 aa23.18■■□□□ 1.3
LMF1-206ENST00000565198 CCDC88BA6NC98 1476 aa23.16■■□□□ 1.3
LMF1-206ENST00000565198 CADPSQ9ULU8 1353 aa23.14■■□□□ 1.3
LMF1-206ENST00000565198 SUPT5HO00267 1087 aaKnown RBP23.13■■□□□ 1.29
LMF1-206ENST00000565198 ERCC6Q03468 1493 aa23.12■■□□□ 1.29
LMF1-206ENST00000565198 KIF21AQ7Z4S6 1674 aa23.08■■□□□ 1.29
LMF1-206ENST00000565198 CFTRP13569 1480 aa23.04■■□□□ 1.28
LMF1-206ENST00000565198 PDS5BQ9NTI5 1447 aa22.99■■□□□ 1.27
LMF1-206ENST00000565198 THOC2Q8NI27 1593 aaKnown RBP22.96■■□□□ 1.27
LMF1-206ENST00000565198 FANCD2Q9BXW9 1451 aa22.91■■□□□ 1.26
LMF1-206ENST00000565198 PRDM2Q13029 1718 aa22.88■■□□□ 1.25
LMF1-206ENST00000565198 CEP164Q9UPV0 1460 aa22.85■■□□□ 1.25
LMF1-206ENST00000565198 CUX2O14529 1486 aa22.84■■□□□ 1.25
LMF1-206ENST00000565198 MRC2Q9UBG0 1479 aa22.81■■□□□ 1.24
LMF1-206ENST00000565198 WDR62O43379 1518 aa22.75■■□□□ 1.23
LMF1-206ENST00000565198 URB2Q14146 1524 aaKnown RBP22.74■■□□□ 1.23
LMF1-206ENST00000565198 TOPBP1Q92547 1522 aa22.57■■□□□ 1.2
LMF1-206ENST00000565198 DNMBPQ6XZF7 1577 aa22.52■■□□□ 1.2
LMF1-206ENST00000565198 CUX1P39880 1505 aa22.46■■□□□ 1.19
LMF1-206ENST00000565198 ABCC8Q09428 1581 aa22.45■■□□□ 1.18
LMF1-206ENST00000565198 POLA1P09884 1462 aaPredicted RBP22.39■■□□□ 1.17
LMF1-206ENST00000565198 ZNF608Q9ULD9 1512 aaPredicted RBP22.36■■□□□ 1.17
LMF1-206ENST00000565198 IFT140Q96RY7 1462 aa22.35■■□□□ 1.17
LMF1-206ENST00000565198 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
LMF1-206ENST00000565198 FGD5Q6ZNL6 1462 aa22.34■■□□□ 1.17
LMF1-206ENST00000565198 RAD54L2Q9Y4B4 1467 aa22.34■■□□□ 1.17
LMF1-206ENST00000565198 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
LMF1-206ENST00000565198 SOGA1O94964 1423 aa22.27■■□□□ 1.16
LMF1-206ENST00000565198 WRNQ14191 1432 aaPredicted RBP eCLIP22.26■■□□□ 1.15
LMF1-206ENST00000565198 BIVM-ERCC5R4GMW8 1640 aa22.24■■□□□ 1.15
LMF1-206ENST00000565198 EIF4G3O43432 1585 aaKnown RBP22.24■■□□□ 1.15
LMF1-206ENST00000565198 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
LMF1-206ENST00000565198 AQRO60306 1485 aaKnown RBP eCLIP22.22■■□□□ 1.15
LMF1-206ENST00000565198 TDRD9Q8NDG6 1382 aaKnown RBP22.19■■□□□ 1.14
LMF1-206ENST00000565198 WDR97A6NE52 1622 aa22.18■■□□□ 1.14
LMF1-206ENST00000565198 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
LMF1-206ENST00000565198 ABCA10Q8WWZ4 1543 aa22.09■■□□□ 1.13
LMF1-206ENST00000565198 ABCA5Q8WWZ7 1642 aa22.04■■□□□ 1.12
LMF1-206ENST00000565198 GAPVD1Q14C86 1478 aa22■■□□□ 1.11
LMF1-206ENST00000565198 PBRM1Q86U86 1689 aa22■■□□□ 1.11
LMF1-206ENST00000565198 SNAPC4Q5SXM2 1469 aa21.99■■□□□ 1.11
LMF1-206ENST00000565198 CHD1O14646 1710 aa21.97■■□□□ 1.11
LMF1-206ENST00000565198 GRIN2BQ13224 1484 aa21.97■■□□□ 1.11
LMF1-206ENST00000565198 OSCARQ8IYS5 282 aa21.92■■□□□ 1.1
LMF1-206ENST00000565198 FBLN2P98095 1184 aa21.9■■□□□ 1.1
LMF1-206ENST00000565198 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
LMF1-206ENST00000565198 SYNJ2O15056 1496 aa21.83■■□□□ 1.08
LMF1-206ENST00000565198 ADAMTS12P58397 1594 aa21.81■■□□□ 1.08
LMF1-206ENST00000565198 CHMP7Q8WUX9 453 aaPredicted RBP21.8■■□□□ 1.08
LMF1-206ENST00000565198 ERICH3Q5RHP9 1530 aa21.8■■□□□ 1.08
LMF1-206ENST00000565198 TRIM41Q8WV44 630 aa21.77■■□□□ 1.08
LMF1-206ENST00000565198 RUSC2Q8N2Y8 1516 aa21.76■■□□□ 1.07
LMF1-206ENST00000565198 KIF27Q86VH2 1401 aa21.76■■□□□ 1.07
LMF1-206ENST00000565198 IGF1RP08069 1367 aa21.74■■□□□ 1.07
LMF1-206ENST00000565198 FHAD1B1AJZ9 1412 aa21.73■■□□□ 1.07
LMF1-206ENST00000565198 GRIN2AQ12879 1464 aa21.72■■□□□ 1.07
LMF1-206ENST00000565198 CLASP1Q7Z460 1538 aa21.7■■□□□ 1.07
LMF1-206ENST00000565198 CEP170Q5SW79 1584 aa21.67■■□□□ 1.06
LMF1-206ENST00000565198 RIMBP3CA6NJZ7 1639 aa21.65■■□□□ 1.06
LMF1-206ENST00000565198 RIMBP3BA6NNM3 1639 aa21.65■■□□□ 1.06
LMF1-206ENST00000565198 RIMBP3Q9UFD9 1639 aa21.65■■□□□ 1.06
LMF1-206ENST00000565198 ARHGEF11O15085 1522 aa21.62■■□□□ 1.05
LMF1-206ENST00000565198 CHIC1Q5VXU3 224 aa21.62■■□□□ 1.05
LMF1-206ENST00000565198 CUL7Q14999 1698 aa21.62■■□□□ 1.05
LMF1-206ENST00000565198 NUP160Q12769 1436 aa21.62■■□□□ 1.05
LMF1-206ENST00000565198 CARMIL1Q5VZK9 1371 aa21.57■■□□□ 1.04
LMF1-206ENST00000565198 ERCC6L2Q5T890 1561 aa21.51■■□□□ 1.03
LMF1-206ENST00000565198 ARAP1Q96P48 1450 aa21.48■■□□□ 1.03
LMF1-206ENST00000565198 SHROOM2Q13796 1616 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 132.9 ms