RNA–Protein interactions for RNA: ENST00000565081.1

SLX1A-206, Transcript of SLX1 homolog A, structure-specific endonuclease subunit, humanhuman

TSL 2

Gene SLX1A, Length 1,558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX1A-206ENST00000565081 NISCHQ9Y2I1 1504 aa48.42■■■■■ 5.34
SLX1A-206ENST00000565081 CCDC180Q9P1Z9 1646 aa42.91■■■■■ 4.46
SLX1A-206ENST00000565081 ABCC9O60706 1549 aa41.89■■■■■ 4.3
SLX1A-206ENST00000565081 ZCCHC6Q5VYS8 1495 aaKnown RBP40.47■■■■■ 4.07
SLX1A-206ENST00000565081 DCAF8L2P0C7V8 631 aa40.21■■■■■ 4.03
SLX1A-206ENST00000565081 NACADO15069 1562 aa40.16■■■■■ 4.02
SLX1A-206ENST00000565081 RB1CC1Q8TDY2 1594 aa40.1■■■■■ 4.01
SLX1A-206ENST00000565081 DCAF1Q9Y4B6 1507 aa40.09■■■■■ 4.01
SLX1A-206ENST00000565081 MYO15BQ96JP2 1530 aa40.06■■■■■ 4
SLX1A-206ENST00000565081 UNC13AQ9UPW8 1703 aa39.31■■■■□ 3.88
SLX1A-206ENST00000565081 SCRIBQ14160 1630 aa39.19■■■■□ 3.86
SLX1A-206ENST00000565081 PABPN1Q86U42 306 aaKnown RBP eCLIP39.05■■■■□ 3.84
SLX1A-206ENST00000565081 BICRAQ9NZM4 1560 aa38.92■■■■□ 3.82
SLX1A-206ENST00000565081 DNAJC5BQ9UF47 199 aa38.87■■■■□ 3.81
SLX1A-206ENST00000565081 SHROOM4Q9ULL8 1493 aa38.58■■■■□ 3.77
SLX1A-206ENST00000565081 EIF4G1Q04637 1599 aaKnown RBP37.92■■■■□ 3.66
SLX1A-206ENST00000565081 CC2D2AQ9P2K1 1620 aa37.89■■■■□ 3.66
SLX1A-206ENST00000565081 CECR2Q9BXF3 1484 aa37.66■■■■□ 3.62
SLX1A-206ENST00000565081 BAZ1AQ9NRL2 1556 aaPredicted RBP37.54■■■■□ 3.6
SLX1A-206ENST00000565081 SMARCA4P51532 1647 aa37.51■■■■□ 3.6
SLX1A-206ENST00000565081 MROH2BQ7Z745 1585 aa37.33■■■■□ 3.57
SLX1A-206ENST00000565081 SMARCA2P51531 1590 aa37.15■■■■□ 3.54
SLX1A-206ENST00000565081 PEG3Q9GZU2 1588 aa37.11■■■■□ 3.53
SLX1A-206ENST00000565081 ATAD2BQ9ULI0 1458 aa37.11■■■■□ 3.53
SLX1A-206ENST00000565081 RSF1Q96T23 1441 aaPredicted RBP37.06■■■■□ 3.52
SLX1A-206ENST00000565081 WIZO95785 1651 aa37■■■■□ 3.51
SLX1A-206ENST00000565081 NCAPD3P42695 1498 aa36.98■■■■□ 3.51
SLX1A-206ENST00000565081 HMGXB3Q12766 1538 aa36.93■■■■□ 3.5
SLX1A-206ENST00000565081 BAZ1BQ9UIG0 1483 aaKnown RBP36.88■■■■□ 3.5
SLX1A-206ENST00000565081 TOP2AP11388 1531 aaKnown RBP36.64■■■■□ 3.46
SLX1A-206ENST00000565081 SUPT5HO00267 1087 aaKnown RBP36.53■■■■□ 3.44
SLX1A-206ENST00000565081 CCDC88BA6NC98 1476 aa36.14■■■■□ 3.38
SLX1A-206ENST00000565081 NESP48681 1621 aa36.14■■■■□ 3.38
SLX1A-206ENST00000565081 ERCC6Q03468 1493 aa36.11■■■■□ 3.37
SLX1A-206ENST00000565081 LAMC3Q9Y6N6 1575 aa36■■■■□ 3.35
SLX1A-206ENST00000565081 CADPSQ9ULU8 1353 aa35.94■■■■□ 3.34
SLX1A-206ENST00000565081 CUX2O14529 1486 aa35.87■■■■□ 3.33
SLX1A-206ENST00000565081 CFTRP13569 1480 aa35.86■■■■□ 3.33
SLX1A-206ENST00000565081 PRDM2Q13029 1718 aa35.8■■■■□ 3.32
SLX1A-206ENST00000565081 KIF21AQ7Z4S6 1674 aa35.75■■■■□ 3.31
SLX1A-206ENST00000565081 PDS5BQ9NTI5 1447 aa35.7■■■■□ 3.31
SLX1A-206ENST00000565081 THOC2Q8NI27 1593 aaKnown RBP35.7■■■■□ 3.3
SLX1A-206ENST00000565081 FANCD2Q9BXW9 1451 aa35.57■■■■□ 3.28
SLX1A-206ENST00000565081 CEP164Q9UPV0 1460 aa35.51■■■■□ 3.27
SLX1A-206ENST00000565081 MRC2Q9UBG0 1479 aa35.35■■■■□ 3.25
SLX1A-206ENST00000565081 DNAJC5Q9H3Z4 198 aa35.3■■■■□ 3.24
SLX1A-206ENST00000565081 WDR62O43379 1518 aa35.28■■■■□ 3.24
SLX1A-206ENST00000565081 URB2Q14146 1524 aaKnown RBP35.17■■■■□ 3.22
SLX1A-206ENST00000565081 DNMBPQ6XZF7 1577 aa35.11■■■■□ 3.21
SLX1A-206ENST00000565081 ABCC8Q09428 1581 aa35.09■■■■□ 3.21
SLX1A-206ENST00000565081 TOPBP1Q92547 1522 aa35.07■■■■□ 3.2
SLX1A-206ENST00000565081 CUX1P39880 1505 aa35■■■■□ 3.19
SLX1A-206ENST00000565081 WRNQ14191 1432 aaPredicted RBP eCLIP34.97■■■■□ 3.19
SLX1A-206ENST00000565081 SYNJ1O43426 1573 aa34.9■■■■□ 3.18
SLX1A-206ENST00000565081 BIVM-ERCC5R4GMW8 1640 aa34.89■■■■□ 3.18
SLX1A-206ENST00000565081 TOP2BQ02880 1626 aa34.88■■■■□ 3.17
SLX1A-206ENST00000565081 FGD5Q6ZNL6 1462 aa34.81■■■■□ 3.16
SLX1A-206ENST00000565081 POLA1P09884 1462 aaPredicted RBP34.81■■■■□ 3.16
SLX1A-206ENST00000565081 IFT140Q96RY7 1462 aa34.72■■■■□ 3.15
SLX1A-206ENST00000565081 CHIC1Q5VXU3 224 aa34.68■■■■□ 3.14
SLX1A-206ENST00000565081 TARBP1Q13395 1621 aaKnown RBP34.66■■■■□ 3.14
SLX1A-206ENST00000565081 SOGA1O94964 1423 aa34.64■■■■□ 3.14
SLX1A-206ENST00000565081 RAD54L2Q9Y4B4 1467 aa34.62■■■■□ 3.13
SLX1A-206ENST00000565081 WDR97A6NE52 1622 aa34.57■■■■□ 3.12
SLX1A-206ENST00000565081 ZNF608Q9ULD9 1512 aaPredicted RBP34.52■■■■□ 3.12
SLX1A-206ENST00000565081 TRIM41Q8WV44 630 aa34.49■■■■□ 3.11
SLX1A-206ENST00000565081 ABCA10Q8WWZ4 1543 aa34.48■■■■□ 3.11
SLX1A-206ENST00000565081 EIF4G3O43432 1585 aaKnown RBP34.47■■■■□ 3.11
SLX1A-206ENST00000565081 TDRD9Q8NDG6 1382 aaKnown RBP34.37■■■■□ 3.09
SLX1A-206ENST00000565081 AQRO60306 1485 aaKnown RBP eCLIP34.35■■■■□ 3.097e-13■■■■□ 23.3
SLX1A-206ENST00000565081 ABCA5Q8WWZ7 1642 aa34.35■■■■□ 3.09
SLX1A-206ENST00000565081 OSCARQ8IYS5 282 aa34.28■■■■□ 3.08
SLX1A-206ENST00000565081 GAPVD1Q14C86 1478 aa34.28■■■■□ 3.08
SLX1A-206ENST00000565081 PBRM1Q86U86 1689 aa34.28■■■■□ 3.08
SLX1A-206ENST00000565081 GRIN2BQ13224 1484 aa34.2■■■■□ 3.07
SLX1A-206ENST00000565081 KIF27Q86VH2 1401 aa34.2■■■■□ 3.07
SLX1A-206ENST00000565081 ERICH3Q5RHP9 1530 aa34.1■■■■□ 3.05
SLX1A-206ENST00000565081 SNAPC4Q5SXM2 1469 aa34.1■■■■□ 3.05
SLX1A-206ENST00000565081 CHD1O14646 1710 aa34.09■■■■□ 3.05
SLX1A-206ENST00000565081 MAGI1Q96QZ7 1491 aaPredicted RBP34.07■■■■□ 3.04
SLX1A-206ENST00000565081 RUSC2Q8N2Y8 1516 aa34.02■■■■□ 3.04
SLX1A-206ENST00000565081 ADAMTS12P58397 1594 aa33.99■■■■□ 3.03
SLX1A-206ENST00000565081 CUL7Q14999 1698 aa33.96■■■■□ 3.03
SLX1A-206ENST00000565081 SYNJ2O15056 1496 aa33.92■■■■□ 3.02
SLX1A-206ENST00000565081 IGF1RP08069 1367 aa33.92■■■■□ 3.02
SLX1A-206ENST00000565081 FBLN2P98095 1184 aa33.91■■■■□ 3.02
SLX1A-206ENST00000565081 EEA1Q15075 1411 aa33.91■■■■□ 3.02
SLX1A-206ENST00000565081 RIMBP3CA6NJZ7 1639 aa33.89■■■■□ 3.02
SLX1A-206ENST00000565081 RIMBP3BA6NNM3 1639 aa33.89■■■■□ 3.02
SLX1A-206ENST00000565081 RIMBP3Q9UFD9 1639 aa33.89■■■■□ 3.02
SLX1A-206ENST00000565081 FHAD1B1AJZ9 1412 aa33.89■■■■□ 3.02
SLX1A-206ENST00000565081 CHMP7Q8WUX9 453 aaPredicted RBP33.83■■■■□ 3.01
SLX1A-206ENST00000565081 ARHGEF11O15085 1522 aa33.8■■■■□ 3
SLX1A-206ENST00000565081 CARMIL1Q5VZK9 1371 aa33.77■■■■□ 3
SLX1A-206ENST00000565081 GRIN2AQ12879 1464 aa33.77■■■■□ 3
SLX1A-206ENST00000565081 FAM9AQ8IZU1 332 aaPredicted RBP33.76■■■□□ 2.99
SLX1A-206ENST00000565081 CSRNP3Q8WYN3 585 aa33.71■■■□□ 2.99
SLX1A-206ENST00000565081 RAPGEF2Q9Y4G8 1499 aa33.67■■■□□ 2.98
SLX1A-206ENST00000565081 PRXQ9BXM0 1461 aa33.65■■■□□ 2.98
SLX1A-206ENST00000565081 CLASP1Q7Z460 1538 aa33.63■■■□□ 2.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms