RNA–Protein interactions for RNA: ENST00000564930.1

E4F1-205, Transcript of E4F transcription factor 1, humanhuman

TSL 3

Gene E4F1, Length 297 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E4F1-205ENST00000564930 NISCHQ9Y2I1 1504 aa42.6■■■■■ 4.41
E4F1-205ENST00000564930 CCDC180Q9P1Z9 1646 aa37.87■■■■□ 3.65
E4F1-205ENST00000564930 ABCC9O60706 1549 aa37.31■■■■□ 3.56
E4F1-205ENST00000564930 DCAF8L2P0C7V8 631 aa35.83■■■■□ 3.33
E4F1-205ENST00000564930 RB1CC1Q8TDY2 1594 aa35.76■■■■□ 3.32
E4F1-205ENST00000564930 NACADO15069 1562 aa35.69■■■■□ 3.3
E4F1-205ENST00000564930 ZCCHC6Q5VYS8 1495 aaKnown RBP35.41■■■■□ 3.26
E4F1-205ENST00000564930 MYO15BQ96JP2 1530 aa35.4■■■■□ 3.26
E4F1-205ENST00000564930 DCAF1Q9Y4B6 1507 aa35.19■■■■□ 3.22
E4F1-205ENST00000564930 UNC13AQ9UPW8 1703 aa34.97■■■■□ 3.19
E4F1-205ENST00000564930 PABPN1Q86U42 306 aaKnown RBP eCLIP34.92■■■■□ 3.18
E4F1-205ENST00000564930 BICRAQ9NZM4 1560 aa34.7■■■■□ 3.14
E4F1-205ENST00000564930 SCRIBQ14160 1630 aa34.59■■■■□ 3.13
E4F1-205ENST00000564930 DNAJC5BQ9UF47 199 aa34.48■■■■□ 3.11
E4F1-205ENST00000564930 SHROOM4Q9ULL8 1493 aa34.24■■■■□ 3.07
E4F1-205ENST00000564930 EIF4G1Q04637 1599 aaKnown RBP33.79■■■■□ 3
E4F1-205ENST00000564930 CC2D2AQ9P2K1 1620 aa33.71■■■□□ 2.99
E4F1-205ENST00000564930 CECR2Q9BXF3 1484 aa33.52■■■□□ 2.96
E4F1-205ENST00000564930 SMARCA4P51532 1647 aa33.06■■■□□ 2.88
E4F1-205ENST00000564930 BAZ1AQ9NRL2 1556 aaPredicted RBP33■■■□□ 2.87
E4F1-205ENST00000564930 NCAPD3P42695 1498 aa32.97■■■□□ 2.87
E4F1-205ENST00000564930 ATAD2BQ9ULI0 1458 aa32.96■■■□□ 2.87
E4F1-205ENST00000564930 SMARCA2P51531 1590 aa32.87■■■□□ 2.85
E4F1-205ENST00000564930 MROH2BQ7Z745 1585 aa32.84■■■□□ 2.85
E4F1-205ENST00000564930 HMGXB3Q12766 1538 aa32.72■■■□□ 2.83
E4F1-205ENST00000564930 PEG3Q9GZU2 1588 aa32.72■■■□□ 2.83
E4F1-205ENST00000564930 BAZ1BQ9UIG0 1483 aaKnown RBP32.67■■■□□ 2.82
E4F1-205ENST00000564930 WIZO95785 1651 aa32.49■■■□□ 2.79
E4F1-205ENST00000564930 RSF1Q96T23 1441 aaPredicted RBP32.43■■■□□ 2.78
E4F1-205ENST00000564930 NESP48681 1621 aa32.24■■■□□ 2.75
E4F1-205ENST00000564930 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
E4F1-205ENST00000564930 LAMC3Q9Y6N6 1575 aa32.09■■■□□ 2.73
E4F1-205ENST00000564930 TOP2AP11388 1531 aaKnown RBP32.08■■■□□ 2.73
E4F1-205ENST00000564930 CADPSQ9ULU8 1353 aa32.02■■■□□ 2.72
E4F1-205ENST00000564930 PDS5BQ9NTI5 1447 aa31.92■■■□□ 2.7
E4F1-205ENST00000564930 CUX2O14529 1486 aa31.83■■■□□ 2.69
E4F1-205ENST00000564930 KIF21AQ7Z4S6 1674 aa31.81■■■□□ 2.68
E4F1-205ENST00000564930 CCDC88BA6NC98 1476 aa31.78■■■□□ 2.68
E4F1-205ENST00000564930 CFTRP13569 1480 aa31.76■■■□□ 2.67
E4F1-205ENST00000564930 THOC2Q8NI27 1593 aaKnown RBP31.7■■■□□ 2.67
E4F1-205ENST00000564930 FANCD2Q9BXW9 1451 aa31.63■■■□□ 2.65
E4F1-205ENST00000564930 SUPT5HO00267 1087 aaKnown RBP31.6■■■□□ 2.65
E4F1-205ENST00000564930 CEP164Q9UPV0 1460 aa31.58■■■□□ 2.65
E4F1-205ENST00000564930 MRC2Q9UBG0 1479 aa31.56■■■□□ 2.64
E4F1-205ENST00000564930 PRDM2Q13029 1718 aa31.46■■■□□ 2.63
E4F1-205ENST00000564930 WDR62O43379 1518 aa31.44■■■□□ 2.62
E4F1-205ENST00000564930 URB2Q14146 1524 aaKnown RBP31.32■■■□□ 2.6
E4F1-205ENST00000564930 DNAJC5Q9H3Z4 198 aa31.16■■■□□ 2.58
E4F1-205ENST00000564930 TOPBP1Q92547 1522 aa31.1■■■□□ 2.57
E4F1-205ENST00000564930 ABCC8Q09428 1581 aa31.09■■■□□ 2.57
E4F1-205ENST00000564930 DNMBPQ6XZF7 1577 aa31.02■■■□□ 2.56
E4F1-205ENST00000564930 IFT140Q96RY7 1462 aa30.94■■■□□ 2.54
E4F1-205ENST00000564930 ZNF608Q9ULD9 1512 aaPredicted RBP30.83■■■□□ 2.53
E4F1-205ENST00000564930 POLA1P09884 1462 aaPredicted RBP30.82■■■□□ 2.52
E4F1-205ENST00000564930 CUX1P39880 1505 aa30.8■■■□□ 2.52
E4F1-205ENST00000564930 SOGA1O94964 1423 aa30.76■■■□□ 2.51
E4F1-205ENST00000564930 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.51
E4F1-205ENST00000564930 RAD54L2Q9Y4B4 1467 aa30.74■■■□□ 2.51
E4F1-205ENST00000564930 FGD5Q6ZNL6 1462 aa30.73■■■□□ 2.51
E4F1-205ENST00000564930 AQRO60306 1485 aaKnown RBP eCLIP30.68■■■□□ 2.52e-6■□□□□ 10.6
E4F1-205ENST00000564930 EIF4G3O43432 1585 aaKnown RBP30.64■■■□□ 2.5
E4F1-205ENST00000564930 OSCARQ8IYS5 282 aa30.61■■■□□ 2.49
E4F1-205ENST00000564930 TDRD9Q8NDG6 1382 aaKnown RBP30.61■■■□□ 2.49
E4F1-205ENST00000564930 WRNQ14191 1432 aaPredicted RBP eCLIP30.56■■■□□ 2.48
E4F1-205ENST00000564930 TOP2BQ02880 1626 aa30.48■■■□□ 2.47
E4F1-205ENST00000564930 SYNJ1O43426 1573 aa30.47■■■□□ 2.47
E4F1-205ENST00000564930 BIVM-ERCC5R4GMW8 1640 aa30.47■■■□□ 2.47
E4F1-205ENST00000564930 WDR97A6NE52 1622 aa30.45■■■□□ 2.47
E4F1-205ENST00000564930 ABCA10Q8WWZ4 1543 aa30.42■■■□□ 2.46
E4F1-205ENST00000564930 FBLN2P98095 1184 aa30.4■■■□□ 2.46
E4F1-205ENST00000564930 GRIN2BQ13224 1484 aa30.36■■■□□ 2.45
E4F1-205ENST00000564930 GAPVD1Q14C86 1478 aa30.36■■■□□ 2.45
E4F1-205ENST00000564930 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
E4F1-205ENST00000564930 CHD1O14646 1710 aa30.31■■■□□ 2.44
E4F1-205ENST00000564930 MAGI1Q96QZ7 1491 aaPredicted RBP30.27■■■□□ 2.44
E4F1-205ENST00000564930 ABCA5Q8WWZ7 1642 aa30.27■■■□□ 2.44
E4F1-205ENST00000564930 CHMP7Q8WUX9 453 aaPredicted RBP30.27■■■□□ 2.44
E4F1-205ENST00000564930 PBRM1Q86U86 1689 aa30.25■■■□□ 2.43
E4F1-205ENST00000564930 SYNJ2O15056 1496 aa30.17■■■□□ 2.42
E4F1-205ENST00000564930 TRIM41Q8WV44 630 aa30.08■■■□□ 2.41
E4F1-205ENST00000564930 RIMBP3CA6NJZ7 1639 aa30.04■■■□□ 2.4
E4F1-205ENST00000564930 RIMBP3BA6NNM3 1639 aa30.04■■■□□ 2.4
E4F1-205ENST00000564930 RIMBP3Q9UFD9 1639 aa30.04■■■□□ 2.4
E4F1-205ENST00000564930 ERICH3Q5RHP9 1530 aa30.03■■■□□ 2.4
E4F1-205ENST00000564930 ARHGEF11O15085 1522 aa30.01■■■□□ 2.39
E4F1-205ENST00000564930 FHAD1B1AJZ9 1412 aa29.99■■■□□ 2.39
E4F1-205ENST00000564930 ADAMTS12P58397 1594 aa29.98■■■□□ 2.39
E4F1-205ENST00000564930 CLASP1Q7Z460 1538 aa29.96■■■□□ 2.39
E4F1-205ENST00000564930 GRIN2AQ12879 1464 aa29.96■■■□□ 2.39
E4F1-205ENST00000564930 KIF27Q86VH2 1401 aa29.95■■■□□ 2.38
E4F1-205ENST00000564930 IGF1RP08069 1367 aa29.9■■■□□ 2.38
E4F1-205ENST00000564930 CYB5RLQ6IPT4 315 aa29.87■■■□□ 2.37
E4F1-205ENST00000564930 NUP160Q12769 1436 aa29.82■■■□□ 2.36
E4F1-205ENST00000564930 CEP170Q5SW79 1584 aa29.81■■■□□ 2.36
E4F1-205ENST00000564930 ARAP1Q96P48 1450 aa29.75■■■□□ 2.35
E4F1-205ENST00000564930 CUL7Q14999 1698 aa29.71■■■□□ 2.35
E4F1-205ENST00000564930 CARMIL1Q5VZK9 1371 aa29.7■■■□□ 2.35
E4F1-205ENST00000564930 RUSC2Q8N2Y8 1516 aa29.67■■■□□ 2.34
E4F1-205ENST00000564930 JPH4Q96JJ6 628 aa29.64■■■□□ 2.34
E4F1-205ENST00000564930 SHROOM2Q13796 1616 aa29.6■■■□□ 2.33
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms