RNA–Protein interactions for RNA: ENST00000564843.1

LINC01413-201, Transcript of long intergenic non-protein coding RNA 1413, humanhuman

TSL 3 BASIC

Gene LINC01413, Length 772 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01413-201ENST00000564843 NISCHQ9Y2I1 1504 aa42.11■■■■■ 4.33
LINC01413-201ENST00000564843 CCDC180Q9P1Z9 1646 aa37.79■■■■□ 3.64
LINC01413-201ENST00000564843 ABCC9O60706 1549 aa37.68■■■■□ 3.62
LINC01413-201ENST00000564843 RB1CC1Q8TDY2 1594 aa35.86■■■■□ 3.33
LINC01413-201ENST00000564843 NACADO15069 1562 aa35.63■■■■□ 3.29
LINC01413-201ENST00000564843 DCAF8L2P0C7V8 631 aa35.4■■■■□ 3.26
LINC01413-201ENST00000564843 UNC13AQ9UPW8 1703 aa35.3■■■■□ 3.24
LINC01413-201ENST00000564843 DNAJC5BQ9UF47 199 aa35.29■■■■□ 3.24
LINC01413-201ENST00000564843 MYO15BQ96JP2 1530 aa35.13■■■■□ 3.21
LINC01413-201ENST00000564843 PABPN1Q86U42 306 aaKnown RBP eCLIP35.06■■■■□ 3.2
LINC01413-201ENST00000564843 ZCCHC6Q5VYS8 1495 aaKnown RBP34.94■■■■□ 3.18
LINC01413-201ENST00000564843 BICRAQ9NZM4 1560 aa34.94■■■■□ 3.18
LINC01413-201ENST00000564843 DCAF1Q9Y4B6 1507 aa34.75■■■■□ 3.15
LINC01413-201ENST00000564843 SCRIBQ14160 1630 aa34.48■■■■□ 3.11
LINC01413-201ENST00000564843 SHROOM4Q9ULL8 1493 aa34.28■■■■□ 3.08
LINC01413-201ENST00000564843 CC2D2AQ9P2K1 1620 aa34.08■■■■□ 3.05
LINC01413-201ENST00000564843 EIF4G1Q04637 1599 aaKnown RBP34■■■■□ 3.03
LINC01413-201ENST00000564843 CECR2Q9BXF3 1484 aa33.89■■■■□ 3.02
LINC01413-201ENST00000564843 SMARCA4P51532 1647 aa32.88■■■□□ 2.85
LINC01413-201ENST00000564843 NCAPD3P42695 1498 aa32.87■■■□□ 2.85
LINC01413-201ENST00000564843 ATAD2BQ9ULI0 1458 aa32.83■■■□□ 2.85
LINC01413-201ENST00000564843 SMARCA2P51531 1590 aa32.71■■■□□ 2.83
LINC01413-201ENST00000564843 HMGXB3Q12766 1538 aa32.68■■■□□ 2.82
LINC01413-201ENST00000564843 BAZ1AQ9NRL2 1556 aaPredicted RBP32.65■■■□□ 2.82
LINC01413-201ENST00000564843 PEG3Q9GZU2 1588 aa32.52■■■□□ 2.8
LINC01413-201ENST00000564843 MROH2BQ7Z745 1585 aa32.5■■■□□ 2.79
LINC01413-201ENST00000564843 BAZ1BQ9UIG0 1483 aaKnown RBP32.49■■■□□ 2.79
LINC01413-201ENST00000564843 ERCC6Q03468 1493 aa32.45■■■□□ 2.79
LINC01413-201ENST00000564843 NESP48681 1621 aa32.44■■■□□ 2.78
LINC01413-201ENST00000564843 CUX2O14529 1486 aa32.36■■■□□ 2.77
LINC01413-201ENST00000564843 DNAJC5Q9H3Z4 198 aa32.22■■■□□ 2.75
LINC01413-201ENST00000564843 WIZO95785 1651 aa32.16■■■□□ 2.74
LINC01413-201ENST00000564843 LAMC3Q9Y6N6 1575 aa32.15■■■□□ 2.74
LINC01413-201ENST00000564843 THOC2Q8NI27 1593 aaKnown RBP32.12■■■□□ 2.73
LINC01413-201ENST00000564843 KIF21AQ7Z4S6 1674 aa32.1■■■□□ 2.73
LINC01413-201ENST00000564843 PDS5BQ9NTI5 1447 aa31.88■■■□□ 2.69
LINC01413-201ENST00000564843 CADPSQ9ULU8 1353 aa31.86■■■□□ 2.69
LINC01413-201ENST00000564843 RSF1Q96T23 1441 aaPredicted RBP31.8■■■□□ 2.68
LINC01413-201ENST00000564843 TOP2AP11388 1531 aaKnown RBP31.68■■■□□ 2.66
LINC01413-201ENST00000564843 MRC2Q9UBG0 1479 aa31.67■■■□□ 2.66
LINC01413-201ENST00000564843 WDR62O43379 1518 aa31.63■■■□□ 2.65
LINC01413-201ENST00000564843 CEP164Q9UPV0 1460 aa31.56■■■□□ 2.64
LINC01413-201ENST00000564843 CFTRP13569 1480 aa31.55■■■□□ 2.64
LINC01413-201ENST00000564843 FANCD2Q9BXW9 1451 aa31.55■■■□□ 2.64
LINC01413-201ENST00000564843 PRDM2Q13029 1718 aa31.42■■■□□ 2.62
LINC01413-201ENST00000564843 URB2Q14146 1524 aaKnown RBP31.34■■■□□ 2.61
LINC01413-201ENST00000564843 CCDC88BA6NC98 1476 aa31.31■■■□□ 2.6
LINC01413-201ENST00000564843 TOPBP1Q92547 1522 aa30.99■■■□□ 2.55
LINC01413-201ENST00000564843 ZNF608Q9ULD9 1512 aaPredicted RBP30.94■■■□□ 2.54
LINC01413-201ENST00000564843 IFT140Q96RY7 1462 aa30.9■■■□□ 2.54
LINC01413-201ENST00000564843 DNMBPQ6XZF7 1577 aa30.88■■■□□ 2.53
LINC01413-201ENST00000564843 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
LINC01413-201ENST00000564843 OSCARQ8IYS5 282 aa30.83■■■□□ 2.53
LINC01413-201ENST00000564843 ABCC8Q09428 1581 aa30.81■■■□□ 2.52
LINC01413-201ENST00000564843 EIF4G3O43432 1585 aaKnown RBP30.79■■■□□ 2.52
LINC01413-201ENST00000564843 TARBP1Q13395 1621 aaKnown RBP30.76■■■□□ 2.52
LINC01413-201ENST00000564843 POLA1P09884 1462 aaPredicted RBP30.68■■■□□ 2.5
LINC01413-201ENST00000564843 AQRO60306 1485 aaKnown RBP eCLIP30.63■■■□□ 2.49
LINC01413-201ENST00000564843 CHD1O14646 1710 aa30.62■■■□□ 2.49
LINC01413-201ENST00000564843 RIMBP3CA6NJZ7 1639 aa30.62■■■□□ 2.49
LINC01413-201ENST00000564843 RIMBP3BA6NNM3 1639 aa30.62■■■□□ 2.49
LINC01413-201ENST00000564843 RIMBP3Q9UFD9 1639 aa30.62■■■□□ 2.49
LINC01413-201ENST00000564843 RAD54L2Q9Y4B4 1467 aa30.58■■■□□ 2.49
LINC01413-201ENST00000564843 CUX1P39880 1505 aa30.53■■■□□ 2.48
LINC01413-201ENST00000564843 FGD5Q6ZNL6 1462 aa30.5■■■□□ 2.47
LINC01413-201ENST00000564843 SOGA1O94964 1423 aa30.47■■■□□ 2.47
LINC01413-201ENST00000564843 ARHGEF11O15085 1522 aa30.47■■■□□ 2.47
LINC01413-201ENST00000564843 TDRD9Q8NDG6 1382 aaKnown RBP30.43■■■□□ 2.46
LINC01413-201ENST00000564843 SUPT5HO00267 1087 aaKnown RBP30.41■■■□□ 2.46
LINC01413-201ENST00000564843 WDR97A6NE52 1622 aa30.39■■■□□ 2.46
LINC01413-201ENST00000564843 SNAPC4Q5SXM2 1469 aa30.33■■■□□ 2.45
LINC01413-201ENST00000564843 FBLN2P98095 1184 aa30.32■■■□□ 2.44
LINC01413-201ENST00000564843 PBRM1Q86U86 1689 aa30.26■■■□□ 2.43
LINC01413-201ENST00000564843 GRIN2BQ13224 1484 aa30.2■■■□□ 2.43
LINC01413-201ENST00000564843 ARAP1Q96P48 1450 aa30.2■■■□□ 2.43
LINC01413-201ENST00000564843 MAGI1Q96QZ7 1491 aaPredicted RBP30.2■■■□□ 2.43
LINC01413-201ENST00000564843 CLASP1Q7Z460 1538 aa30.18■■■□□ 2.42
LINC01413-201ENST00000564843 ABCA5Q8WWZ7 1642 aa30.16■■■□□ 2.42
LINC01413-201ENST00000564843 CYB5RLQ6IPT4 315 aa30.16■■■□□ 2.42
LINC01413-201ENST00000564843 GAPVD1Q14C86 1478 aa30.13■■■□□ 2.41
LINC01413-201ENST00000564843 ABCA10Q8WWZ4 1543 aa30.13■■■□□ 2.41
LINC01413-201ENST00000564843 SYNJ1O43426 1573 aa30.11■■■□□ 2.41
LINC01413-201ENST00000564843 SYNJ2O15056 1496 aa30.1■■■□□ 2.41
LINC01413-201ENST00000564843 BIVM-ERCC5R4GMW8 1640 aa30.08■■■□□ 2.41
LINC01413-201ENST00000564843 CHMP7Q8WUX9 453 aaPredicted RBP30.08■■■□□ 2.41
LINC01413-201ENST00000564843 TOP2BQ02880 1626 aa30.04■■■□□ 2.4
LINC01413-201ENST00000564843 WRNQ14191 1432 aaPredicted RBP eCLIP29.96■■■□□ 2.39
LINC01413-201ENST00000564843 ADAMTS12P58397 1594 aa29.91■■■□□ 2.38
LINC01413-201ENST00000564843 GRIN2AQ12879 1464 aa29.86■■■□□ 2.37
LINC01413-201ENST00000564843 CEP170Q5SW79 1584 aa29.82■■■□□ 2.36
LINC01413-201ENST00000564843 ERCC6L2Q5T890 1561 aa29.79■■■□□ 2.36
LINC01413-201ENST00000564843 TRHP20396 242 aaPredicted RBP29.75■■■□□ 2.35
LINC01413-201ENST00000564843 NUP160Q12769 1436 aa29.75■■■□□ 2.35
LINC01413-201ENST00000564843 ERICH3Q5RHP9 1530 aa29.75■■■□□ 2.35
LINC01413-201ENST00000564843 FHAD1B1AJZ9 1412 aa29.72■■■□□ 2.35
LINC01413-201ENST00000564843 SHROOM2Q13796 1616 aa29.67■■■□□ 2.34
LINC01413-201ENST00000564843 RUSC2Q8N2Y8 1516 aa29.5■■■□□ 2.31
LINC01413-201ENST00000564843 PRG4Q92954 1404 aaPredicted RBP29.43■■■□□ 2.3
LINC01413-201ENST00000564843 IGF1RP08069 1367 aa29.38■■■□□ 2.29
LINC01413-201ENST00000564843 JPH4Q96JJ6 628 aa29.37■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms