RNA–Protein interactions for RNA: ENST00000564718.1

E2F4-204, Transcript of E2F transcription factor 4, humanhuman

TSL 3

Gene E2F4, Length 688 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
E2F4-204ENST00000564718 NISCHQ9Y2I1 1504 aa31.39■■■□□ 2.61
E2F4-204ENST00000564718 CCDC180Q9P1Z9 1646 aa27.97■■■□□ 2.07
E2F4-204ENST00000564718 ABCC9O60706 1549 aa27.92■■■□□ 2.06
E2F4-204ENST00000564718 RB1CC1Q8TDY2 1594 aa26.6■■□□□ 1.85
E2F4-204ENST00000564718 NACADO15069 1562 aa26.49■■□□□ 1.83
E2F4-204ENST00000564718 DCAF8L2P0C7V8 631 aa26.48■■□□□ 1.83
E2F4-204ENST00000564718 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
E2F4-204ENST00000564718 DNAJC5BQ9UF47 199 aa26.2■■□□□ 1.78
E2F4-204ENST00000564718 PABPN1Q86U42 306 aaKnown RBP eCLIP26.11■■□□□ 1.77
E2F4-204ENST00000564718 ZCCHC6Q5VYS8 1495 aaKnown RBP26.02■■□□□ 1.76
E2F4-204ENST00000564718 DCAF1Q9Y4B6 1507 aa25.93■■□□□ 1.74
E2F4-204ENST00000564718 UNC13AQ9UPW8 1703 aa25.93■■□□□ 1.74
E2F4-204ENST00000564718 BICRAQ9NZM4 1560 aa25.87■■□□□ 1.73
E2F4-204ENST00000564718 SCRIBQ14160 1630 aa25.52■■□□□ 1.68
E2F4-204ENST00000564718 SHROOM4Q9ULL8 1493 aa25.5■■□□□ 1.67
E2F4-204ENST00000564718 CC2D2AQ9P2K1 1620 aa25.19■■□□□ 1.62
E2F4-204ENST00000564718 EIF4G1Q04637 1599 aaKnown RBP25.19■■□□□ 1.62
E2F4-204ENST00000564718 CECR2Q9BXF3 1484 aa25.15■■□□□ 1.62
E2F4-204ENST00000564718 NCAPD3P42695 1498 aa24.53■■□□□ 1.52
E2F4-204ENST00000564718 ATAD2BQ9ULI0 1458 aa24.45■■□□□ 1.51
E2F4-204ENST00000564718 SMARCA4P51532 1647 aa24.39■■□□□ 1.49
E2F4-204ENST00000564718 SMARCA2P51531 1590 aa24.33■■□□□ 1.48
E2F4-204ENST00000564718 BAZ1AQ9NRL2 1556 aaPredicted RBP24.31■■□□□ 1.48
E2F4-204ENST00000564718 HMGXB3Q12766 1538 aa24.26■■□□□ 1.47
E2F4-204ENST00000564718 MROH2BQ7Z745 1585 aa24.19■■□□□ 1.46
E2F4-204ENST00000564718 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
E2F4-204ENST00000564718 BAZ1BQ9UIG0 1483 aaKnown RBP24.17■■□□□ 1.46
E2F4-204ENST00000564718 NESP48681 1621 aa24.05■■□□□ 1.44
E2F4-204ENST00000564718 ERCC6Q03468 1493 aa24.05■■□□□ 1.44
E2F4-204ENST00000564718 CUX2O14529 1486 aa23.98■■□□□ 1.43
E2F4-204ENST00000564718 DNAJC5Q9H3Z4 198 aa23.92■■□□□ 1.42
E2F4-204ENST00000564718 WIZO95785 1651 aa23.86■■□□□ 1.41
E2F4-204ENST00000564718 LAMC3Q9Y6N6 1575 aa23.85■■□□□ 1.41
E2F4-204ENST00000564718 CADPSQ9ULU8 1353 aa23.79■■□□□ 1.4
E2F4-204ENST00000564718 RSF1Q96T23 1441 aaPredicted RBP23.79■■□□□ 1.4
E2F4-204ENST00000564718 PDS5BQ9NTI5 1447 aa23.77■■□□□ 1.4
E2F4-204ENST00000564718 THOC2Q8NI27 1593 aaKnown RBP23.69■■□□□ 1.38
E2F4-204ENST00000564718 KIF21AQ7Z4S6 1674 aa23.63■■□□□ 1.37
E2F4-204ENST00000564718 TOP2AP11388 1531 aaKnown RBP23.56■■□□□ 1.36
E2F4-204ENST00000564718 CFTRP13569 1480 aa23.54■■□□□ 1.36
E2F4-204ENST00000564718 MRC2Q9UBG0 1479 aa23.52■■□□□ 1.36
E2F4-204ENST00000564718 FANCD2Q9BXW9 1451 aa23.47■■□□□ 1.35
E2F4-204ENST00000564718 WDR62O43379 1518 aa23.44■■□□□ 1.34
E2F4-204ENST00000564718 CEP164Q9UPV0 1460 aa23.43■■□□□ 1.34
E2F4-204ENST00000564718 CCDC88BA6NC98 1476 aa23.37■■□□□ 1.33
E2F4-204ENST00000564718 URB2Q14146 1524 aaKnown RBP23.27■■□□□ 1.32
E2F4-204ENST00000564718 PRDM2Q13029 1718 aa23.11■■□□□ 1.29
E2F4-204ENST00000564718 TOPBP1Q92547 1522 aa23.03■■□□□ 1.28
E2F4-204ENST00000564718 OSCARQ8IYS5 282 aa23.02■■□□□ 1.28
E2F4-204ENST00000564718 ABCC8Q09428 1581 aa23.01■■□□□ 1.27
E2F4-204ENST00000564718 IFT140Q96RY7 1462 aa23■■□□□ 1.27
E2F4-204ENST00000564718 ZNF608Q9ULD9 1512 aaPredicted RBP22.97■■□□□ 1.27
E2F4-204ENST00000564718 DNMBPQ6XZF7 1577 aa22.93■■□□□ 1.26
E2F4-204ENST00000564718 SUPT5HO00267 1087 aaKnown RBP22.86■■□□□ 1.25
E2F4-204ENST00000564718 TRIM41Q8WV44 630 aa22.85■■□□□ 1.25
E2F4-204ENST00000564718 POLA1P09884 1462 aaPredicted RBP22.81■■□□□ 1.24
E2F4-204ENST00000564718 AQRO60306 1485 aaKnown RBP eCLIP22.8■■□□□ 1.241e-7■■■■■ 33.9
E2F4-204ENST00000564718 TARBP1Q13395 1621 aaKnown RBP22.8■■□□□ 1.24
E2F4-204ENST00000564718 SOGA1O94964 1423 aa22.76■■□□□ 1.23
E2F4-204ENST00000564718 RAD54L2Q9Y4B4 1467 aa22.76■■□□□ 1.23
E2F4-204ENST00000564718 EIF4G3O43432 1585 aaKnown RBP22.75■■□□□ 1.23
E2F4-204ENST00000564718 TDRD9Q8NDG6 1382 aaKnown RBP22.71■■□□□ 1.23
E2F4-204ENST00000564718 CUX1P39880 1505 aa22.7■■□□□ 1.22
E2F4-204ENST00000564718 FGD5Q6ZNL6 1462 aa22.68■■□□□ 1.22
E2F4-204ENST00000564718 FBLN2P98095 1184 aa22.62■■□□□ 1.21
E2F4-204ENST00000564718 RIMBP3CA6NJZ7 1639 aa22.56■■□□□ 1.2
E2F4-204ENST00000564718 RIMBP3BA6NNM3 1639 aa22.56■■□□□ 1.2
E2F4-204ENST00000564718 RIMBP3Q9UFD9 1639 aa22.56■■□□□ 1.2
E2F4-204ENST00000564718 ARHGEF11O15085 1522 aa22.54■■□□□ 1.2
E2F4-204ENST00000564718 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
E2F4-204ENST00000564718 CHD1O14646 1710 aa22.52■■□□□ 1.2
E2F4-204ENST00000564718 SNAPC4Q5SXM2 1469 aa22.51■■□□□ 1.19
E2F4-204ENST00000564718 GRIN2BQ13224 1484 aa22.5■■□□□ 1.19
E2F4-204ENST00000564718 CHMP7Q8WUX9 453 aaPredicted RBP22.49■■□□□ 1.19
E2F4-204ENST00000564718 MAGI1Q96QZ7 1491 aaPredicted RBP22.47■■□□□ 1.19
E2F4-204ENST00000564718 CYB5RLQ6IPT4 315 aa22.46■■□□□ 1.19
E2F4-204ENST00000564718 ABCA10Q8WWZ4 1543 aa22.46■■□□□ 1.19
E2F4-204ENST00000564718 GAPVD1Q14C86 1478 aa22.45■■□□□ 1.18
E2F4-204ENST00000564718 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
E2F4-204ENST00000564718 SYNJ2O15056 1496 aa22.41■■□□□ 1.18
E2F4-204ENST00000564718 CLASP1Q7Z460 1538 aa22.35■■□□□ 1.17
E2F4-204ENST00000564718 TOP2BQ02880 1626 aa22.35■■□□□ 1.17
E2F4-204ENST00000564718 ARAP1Q96P48 1450 aa22.34■■□□□ 1.17
E2F4-204ENST00000564718 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
E2F4-204ENST00000564718 SYNJ1O43426 1573 aa22.33■■□□□ 1.16
E2F4-204ENST00000564718 BIVM-ERCC5R4GMW8 1640 aa22.31■■□□□ 1.16
E2F4-204ENST00000564718 PBRM1Q86U86 1689 aa22.3■■□□□ 1.16
E2F4-204ENST00000564718 GRIN2AQ12879 1464 aa22.2■■□□□ 1.14
E2F4-204ENST00000564718 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
E2F4-204ENST00000564718 NUP160Q12769 1436 aa22.15■■□□□ 1.14
E2F4-204ENST00000564718 ADAMTS12P58397 1594 aa22.15■■□□□ 1.14
E2F4-204ENST00000564718 ERICH3Q5RHP9 1530 aa22.15■■□□□ 1.14
E2F4-204ENST00000564718 TRHP20396 242 aaPredicted RBP22.11■■□□□ 1.13
E2F4-204ENST00000564718 CEP170Q5SW79 1584 aa22.09■■□□□ 1.13
E2F4-204ENST00000564718 ERCC6L2Q5T890 1561 aa22.04■■□□□ 1.12
E2F4-204ENST00000564718 IGF1RP08069 1367 aa22.02■■□□□ 1.12
E2F4-204ENST00000564718 JPH4Q96JJ6 628 aa22■■□□□ 1.11
E2F4-204ENST00000564718 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
E2F4-204ENST00000564718 KIF27Q86VH2 1401 aa21.97■■□□□ 1.11
E2F4-204ENST00000564718 PRG4Q92954 1404 aaPredicted RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms