RNA–Protein interactions for RNA: ENST00000564616.1

RIPOR1-209, Transcript of RHO family interacting cell polarization regulator 1, human

TSL 2

Gene RIPOR1, Length 745 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RIPOR1-209	ENST00000564616	NISCH	Q9Y2I1	1504 aa		44.7	■■■■■ 4.75
RIPOR1-209	ENST00000564616	CCDC180	Q9P1Z9	1646 aa		39.95	■■■■□ 3.99
RIPOR1-209	ENST00000564616	ABCC9	O60706	1549 aa		39.29	■■■■□ 3.88
RIPOR1-209	ENST00000564616	RB1CC1	Q8TDY2	1594 aa		37.66	■■■■□ 3.62
RIPOR1-209	ENST00000564616	NACAD	O15069	1562 aa		37.55	■■■■□ 3.6
RIPOR1-209	ENST00000564616	MYO15B	Q96JP2	1530 aa		37.24	■■■■□ 3.55
RIPOR1-209	ENST00000564616	ZCCHC6	Q5VYS8	1495 aa	Known RBP	37.22	■■■■□ 3.55
RIPOR1-209	ENST00000564616	DCAF8L2	P0C7V8	631 aa		37.22	■■■■□ 3.55
RIPOR1-209	ENST00000564616	UNC13A	Q9UPW8	1703 aa		37.03	■■■■□ 3.52
RIPOR1-209	ENST00000564616	DCAF1	Q9Y4B6	1507 aa		36.98	■■■■□ 3.51
RIPOR1-209	ENST00000564616	BICRA	Q9NZM4	1560 aa		36.67	■■■■□ 3.46
RIPOR1-209	ENST00000564616	PABPN1	Q86U42	306 aa	Known RBP eCLIP	36.59	■■■■□ 3.45
RIPOR1-209	ENST00000564616	SCRIB	Q14160	1630 aa		36.41	■■■■□ 3.42
RIPOR1-209	ENST00000564616	DNAJC5B	Q9UF47	199 aa		36.35	■■■■□ 3.41
RIPOR1-209	ENST00000564616	SHROOM4	Q9ULL8	1493 aa		36.11	■■■■□ 3.37
RIPOR1-209	ENST00000564616	EIF4G1	Q04637	1599 aa	Known RBP	35.65	■■■■□ 3.3
RIPOR1-209	ENST00000564616	CC2D2A	Q9P2K1	1620 aa		35.58	■■■■□ 3.29
RIPOR1-209	ENST00000564616	CECR2	Q9BXF3	1484 aa		35.31	■■■■□ 3.24
RIPOR1-209	ENST00000564616	SMARCA4	P51532	1647 aa		34.81	■■■■□ 3.16
RIPOR1-209	ENST00000564616	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	34.64	■■■■□ 3.14
RIPOR1-209	ENST00000564616	NCAPD3	P42695	1498 aa		34.63	■■■■□ 3.13
RIPOR1-209	ENST00000564616	ATAD2B	Q9ULI0	1458 aa		34.63	■■■■□ 3.13
RIPOR1-209	ENST00000564616	SMARCA2	P51531	1590 aa		34.55	■■■■□ 3.12
RIPOR1-209	ENST00000564616	HMGXB3	Q12766	1538 aa		34.49	■■■■□ 3.11
RIPOR1-209	ENST00000564616	MROH2B	Q7Z745	1585 aa		34.49	■■■■□ 3.11
RIPOR1-209	ENST00000564616	PEG3	Q9GZU2	1588 aa		34.47	■■■■□ 3.11
RIPOR1-209	ENST00000564616	BAZ1B	Q9UIG0	1483 aa	Known RBP	34.29	■■■■□ 3.08
RIPOR1-209	ENST00000564616	WIZ	O95785	1651 aa		34.13	■■■■□ 3.05
RIPOR1-209	ENST00000564616	NES	P48681	1621 aa		33.97	■■■■□ 3.03
RIPOR1-209	ENST00000564616	RSF1	Q96T23	1441 aa	Predicted RBP	33.93	■■■■□ 3.02
RIPOR1-209	ENST00000564616	ERCC6	Q03468	1493 aa		33.81	■■■■□ 3
RIPOR1-209	ENST00000564616	LAMC3	Q9Y6N6	1575 aa		33.8	■■■■□ 3
RIPOR1-209	ENST00000564616	TOP2A	P11388	1531 aa	Known RBP	33.7	■■■□□ 2.99
RIPOR1-209	ENST00000564616	KIF21A	Q7Z4S6	1674 aa		33.64	■■■□□ 2.98
RIPOR1-209	ENST00000564616	CUX2	O14529	1486 aa		33.62	■■■□□ 2.97
RIPOR1-209	ENST00000564616	THOC2	Q8NI27	1593 aa	Known RBP	33.59	■■■□□ 2.97
RIPOR1-209	ENST00000564616	CADPS	Q9ULU8	1353 aa		33.56	■■■□□ 2.96
RIPOR1-209	ENST00000564616	PDS5B	Q9NTI5	1447 aa		33.47	■■■□□ 2.95
RIPOR1-209	ENST00000564616	CFTR	P13569	1480 aa		33.36	■■■□□ 2.93
RIPOR1-209	ENST00000564616	CCDC88B	A6NC98	1476 aa		33.27	■■■□□ 2.92
RIPOR1-209	ENST00000564616	PRDM2	Q13029	1718 aa		33.25	■■■□□ 2.91
RIPOR1-209	ENST00000564616	MRC2	Q9UBG0	1479 aa		33.23	■■■□□ 2.91
RIPOR1-209	ENST00000564616	FANCD2	Q9BXW9	1451 aa		33.22	■■■□□ 2.91
RIPOR1-209	ENST00000564616	CEP164	Q9UPV0	1460 aa		33.2	■■■□□ 2.91
RIPOR1-209	ENST00000564616	WDR62	O43379	1518 aa		33.19	■■■□□ 2.9
RIPOR1-209	ENST00000564616	URB2	Q14146	1524 aa	Known RBP	32.97	■■■□□ 2.87
RIPOR1-209	ENST00000564616	DNAJC5	Q9H3Z4	198 aa		32.88	■■■□□ 2.85
RIPOR1-209	ENST00000564616	TOPBP1	Q92547	1522 aa		32.69	■■■□□ 2.82
RIPOR1-209	ENST00000564616	SUPT5H	O00267	1087 aa	Known RBP	32.68	■■■□□ 2.82
RIPOR1-209	ENST00000564616	DNMBP	Q6XZF7	1577 aa		32.64	■■■□□ 2.82
RIPOR1-209	ENST00000564616	ABCC8	Q09428	1581 aa		32.56	■■■□□ 2.8
RIPOR1-209	ENST00000564616	IFT140	Q96RY7	1462 aa		32.5	■■■□□ 2.79
RIPOR1-209	ENST00000564616	ZNF608	Q9ULD9	1512 aa	Predicted RBP	32.46	■■■□□ 2.79
RIPOR1-209	ENST00000564616	TARBP1	Q13395	1621 aa	Known RBP	32.43	■■■□□ 2.78
RIPOR1-209	ENST00000564616	POLA1	P09884	1462 aa	Predicted RBP	32.4	■■■□□ 2.78
RIPOR1-209	ENST00000564616	CUX1	P39880	1505 aa		32.38	■■■□□ 2.77
RIPOR1-209	ENST00000564616	EIF4G3	O43432	1585 aa	Known RBP	32.36	■■■□□ 2.77
RIPOR1-209	ENST00000564616	FGD5	Q6ZNL6	1462 aa		32.27	■■■□□ 2.76
RIPOR1-209	ENST00000564616	RAD54L2	Q9Y4B4	1467 aa		32.25	■■■□□ 2.75
RIPOR1-209	ENST00000564616	AQR	O60306	1485 aa	Known RBP eCLIP	32.17	■■■□□ 2.74
RIPOR1-209	ENST00000564616	WDR97	A6NE52	1622 aa		32.16	■■■□□ 2.74
RIPOR1-209	ENST00000564616	SOGA1	O94964	1423 aa		32.16	■■■□□ 2.74
RIPOR1-209	ENST00000564616	CHD1	O14646	1710 aa		32.06	■■■□□ 2.72
RIPOR1-209	ENST00000564616	BIVM-ERCC5	R4GMW8	1640 aa		32.05	■■■□□ 2.72
RIPOR1-209	ENST00000564616	TDRD9	Q8NDG6	1382 aa	Known RBP	32.04	■■■□□ 2.72
RIPOR1-209	ENST00000564616	OSCAR	Q8IYS5	282 aa		32.03	■■■□□ 2.72
RIPOR1-209	ENST00000564616	SYNJ1	O43426	1573 aa		32.02	■■■□□ 2.72
RIPOR1-209	ENST00000564616	TOP2B	Q02880	1626 aa		32	■■■□□ 2.71
RIPOR1-209	ENST00000564616	WRN	Q14191	1432 aa	Predicted RBP eCLIP	31.95	■■■□□ 2.71
RIPOR1-209	ENST00000564616	ABCA10	Q8WWZ4	1543 aa		31.93	■■■□□ 2.7
RIPOR1-209	ENST00000564616	PBRM1	Q86U86	1689 aa		31.92	■■■□□ 2.7
RIPOR1-209	ENST00000564616	ABCA5	Q8WWZ7	1642 aa		31.92	■■■□□ 2.7
RIPOR1-209	ENST00000564616	SNAPC4	Q5SXM2	1469 aa		31.91	■■■□□ 2.7
RIPOR1-209	ENST00000564616	GRIN2B	Q13224	1484 aa		31.85	■■■□□ 2.69
RIPOR1-209	ENST00000564616	GAPVD1	Q14C86	1478 aa		31.83	■■■□□ 2.69
RIPOR1-209	ENST00000564616	MAGI1	Q96QZ7	1491 aa	Predicted RBP	31.83	■■■□□ 2.69
RIPOR1-209	ENST00000564616	RIMBP3C	A6NJZ7	1639 aa		31.78	■■■□□ 2.68
RIPOR1-209	ENST00000564616	RIMBP3B	A6NNM3	1639 aa		31.78	■■■□□ 2.68
RIPOR1-209	ENST00000564616	RIMBP3	Q9UFD9	1639 aa		31.78	■■■□□ 2.68
RIPOR1-209	ENST00000564616	FBLN2	P98095	1184 aa		31.7	■■■□□ 2.67
RIPOR1-209	ENST00000564616	SYNJ2	O15056	1496 aa		31.7	■■■□□ 2.66
RIPOR1-209	ENST00000564616	ARHGEF11	O15085	1522 aa		31.7	■■■□□ 2.66
RIPOR1-209	ENST00000564616	CLASP1	Q7Z460	1538 aa		31.66	■■■□□ 2.66
RIPOR1-209	ENST00000564616	ADAMTS12	P58397	1594 aa		31.62	■■■□□ 2.65
RIPOR1-209	ENST00000564616	TRIM41	Q8WV44	630 aa		31.61	■■■□□ 2.65
RIPOR1-209	ENST00000564616	CHMP7	Q8WUX9	453 aa	Predicted RBP	31.57	■■■□□ 2.64
RIPOR1-209	ENST00000564616	ERICH3	Q5RHP9	1530 aa		31.54	■■■□□ 2.64
RIPOR1-209	ENST00000564616	GRIN2A	Q12879	1464 aa		31.49	■■■□□ 2.63
RIPOR1-209	ENST00000564616	ARAP1	Q96P48	1450 aa		31.45	■■■□□ 2.62
RIPOR1-209	ENST00000564616	FHAD1	B1AJZ9	1412 aa		31.43	■■■□□ 2.62
RIPOR1-209	ENST00000564616	CEP170	Q5SW79	1584 aa		31.42	■■■□□ 2.62
RIPOR1-209	ENST00000564616	NUP160	Q12769	1436 aa		31.38	■■■□□ 2.61
RIPOR1-209	ENST00000564616	KIF27	Q86VH2	1401 aa		31.26	■■■□□ 2.6
RIPOR1-209	ENST00000564616	CYB5RL	Q6IPT4	315 aa		31.26	■■■□□ 2.59
RIPOR1-209	ENST00000564616	SHROOM2	Q13796	1616 aa		31.25	■■■□□ 2.59
RIPOR1-209	ENST00000564616	ERCC6L2	Q5T890	1561 aa		31.23	■■■□□ 2.59
RIPOR1-209	ENST00000564616	CUL7	Q14999	1698 aa		31.22	■■■□□ 2.59
RIPOR1-209	ENST00000564616	IGF1R	P08069	1367 aa		31.21	■■■□□ 2.59
RIPOR1-209	ENST00000564616	RUSC2	Q8N2Y8	1516 aa		31.18	■■■□□ 2.58
RIPOR1-209	ENST00000564616	CARMIL1	Q5VZK9	1371 aa		30.99	■■■□□ 2.55

Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms