RNA–Protein interactions for RNA: ENST00000564592.1

MKRN3-202, Transcript of makorin ring finger protein 3, humanhuman

TSL 3 BASIC

Gene MKRN3, Length 629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN3-202ENST00000564592 NISCHQ9Y2I1 1504 aa32.42■■■□□ 2.78
MKRN3-202ENST00000564592 CCDC180Q9P1Z9 1646 aa28.96■■■□□ 2.23
MKRN3-202ENST00000564592 ABCC9O60706 1549 aa28.9■■■□□ 2.22
MKRN3-202ENST00000564592 RB1CC1Q8TDY2 1594 aa27.52■■■□□ 2
MKRN3-202ENST00000564592 DCAF8L2P0C7V8 631 aa27.41■■□□□ 1.98
MKRN3-202ENST00000564592 NACADO15069 1562 aa27.36■■□□□ 1.97
MKRN3-202ENST00000564592 MYO15BQ96JP2 1530 aa27■■□□□ 1.91
MKRN3-202ENST00000564592 DNAJC5BQ9UF47 199 aa27■■□□□ 1.91
MKRN3-202ENST00000564592 PABPN1Q86U42 306 aaKnown RBP eCLIP26.98■■□□□ 1.91
MKRN3-202ENST00000564592 UNC13AQ9UPW8 1703 aa26.9■■□□□ 1.9
MKRN3-202ENST00000564592 ZCCHC6Q5VYS8 1495 aaKnown RBP26.9■■□□□ 1.9
MKRN3-202ENST00000564592 DCAF1Q9Y4B6 1507 aa26.75■■□□□ 1.87
MKRN3-202ENST00000564592 BICRAQ9NZM4 1560 aa26.74■■□□□ 1.87
MKRN3-202ENST00000564592 SCRIBQ14160 1630 aa26.48■■□□□ 1.83
MKRN3-202ENST00000564592 SHROOM4Q9ULL8 1493 aa26.3■■□□□ 1.8
MKRN3-202ENST00000564592 CC2D2AQ9P2K1 1620 aa26.08■■□□□ 1.77
MKRN3-202ENST00000564592 EIF4G1Q04637 1599 aaKnown RBP26.06■■□□□ 1.76
MKRN3-202ENST00000564592 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
MKRN3-202ENST00000564592 NCAPD3P42695 1498 aa25.28■■□□□ 1.64
MKRN3-202ENST00000564592 ATAD2BQ9ULI0 1458 aa25.25■■□□□ 1.63
MKRN3-202ENST00000564592 SMARCA4P51532 1647 aa25.25■■□□□ 1.63
MKRN3-202ENST00000564592 SMARCA2P51531 1590 aa25.14■■□□□ 1.62
MKRN3-202ENST00000564592 BAZ1AQ9NRL2 1556 aaPredicted RBP25.14■■□□□ 1.62
MKRN3-202ENST00000564592 HMGXB3Q12766 1538 aa25.07■■□□□ 1.6
MKRN3-202ENST00000564592 MROH2BQ7Z745 1585 aa25.01■■□□□ 1.59
MKRN3-202ENST00000564592 BAZ1BQ9UIG0 1483 aaKnown RBP25.01■■□□□ 1.59
MKRN3-202ENST00000564592 PEG3Q9GZU2 1588 aa24.97■■□□□ 1.59
MKRN3-202ENST00000564592 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
MKRN3-202ENST00000564592 NESP48681 1621 aa24.88■■□□□ 1.57
MKRN3-202ENST00000564592 CUX2O14529 1486 aa24.76■■□□□ 1.55
MKRN3-202ENST00000564592 WIZO95785 1651 aa24.72■■□□□ 1.55
MKRN3-202ENST00000564592 LAMC3Q9Y6N6 1575 aa24.66■■□□□ 1.54
MKRN3-202ENST00000564592 DNAJC5Q9H3Z4 198 aa24.62■■□□□ 1.53
MKRN3-202ENST00000564592 RSF1Q96T23 1441 aaPredicted RBP24.55■■□□□ 1.52
MKRN3-202ENST00000564592 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
MKRN3-202ENST00000564592 CADPSQ9ULU8 1353 aa24.54■■□□□ 1.52
MKRN3-202ENST00000564592 PDS5BQ9NTI5 1447 aa24.53■■□□□ 1.52
MKRN3-202ENST00000564592 KIF21AQ7Z4S6 1674 aa24.53■■□□□ 1.52
MKRN3-202ENST00000564592 TOP2AP11388 1531 aaKnown RBP24.39■■□□□ 1.49
MKRN3-202ENST00000564592 MRC2Q9UBG0 1479 aa24.32■■□□□ 1.48
MKRN3-202ENST00000564592 CFTRP13569 1480 aa24.28■■□□□ 1.48
MKRN3-202ENST00000564592 FANCD2Q9BXW9 1451 aa24.26■■□□□ 1.47
MKRN3-202ENST00000564592 CEP164Q9UPV0 1460 aa24.26■■□□□ 1.47
MKRN3-202ENST00000564592 WDR62O43379 1518 aa24.24■■□□□ 1.47
MKRN3-202ENST00000564592 CCDC88BA6NC98 1476 aa24.15■■□□□ 1.46
MKRN3-202ENST00000564592 URB2Q14146 1524 aaKnown RBP24.06■■□□□ 1.44
MKRN3-202ENST00000564592 PRDM2Q13029 1718 aa24■■□□□ 1.43
MKRN3-202ENST00000564592 TOPBP1Q92547 1522 aa23.82■■□□□ 1.4
MKRN3-202ENST00000564592 SUPT5HO00267 1087 aaKnown RBP23.78■■□□□ 1.4
MKRN3-202ENST00000564592 IFT140Q96RY7 1462 aa23.76■■□□□ 1.39
MKRN3-202ENST00000564592 ZNF608Q9ULD9 1512 aaPredicted RBP23.75■■□□□ 1.39
MKRN3-202ENST00000564592 ABCC8Q09428 1581 aa23.74■■□□□ 1.39
MKRN3-202ENST00000564592 OSCARQ8IYS5 282 aa23.72■■□□□ 1.39
MKRN3-202ENST00000564592 DNMBPQ6XZF7 1577 aa23.72■■□□□ 1.39
MKRN3-202ENST00000564592 TRIM41Q8WV44 630 aa23.66■■□□□ 1.38
MKRN3-202ENST00000564592 POLA1P09884 1462 aaPredicted RBP23.59■■□□□ 1.37
MKRN3-202ENST00000564592 EIF4G3O43432 1585 aaKnown RBP23.59■■□□□ 1.37
MKRN3-202ENST00000564592 TARBP1Q13395 1621 aaKnown RBP23.59■■□□□ 1.37
MKRN3-202ENST00000564592 AQRO60306 1485 aaKnown RBP eCLIP23.56■■□□□ 1.36
MKRN3-202ENST00000564592 RAD54L2Q9Y4B4 1467 aa23.54■■□□□ 1.36
MKRN3-202ENST00000564592 SOGA1O94964 1423 aa23.5■■□□□ 1.35
MKRN3-202ENST00000564592 FGD5Q6ZNL6 1462 aa23.48■■□□□ 1.35
MKRN3-202ENST00000564592 CUX1P39880 1505 aa23.48■■□□□ 1.35
MKRN3-202ENST00000564592 TDRD9Q8NDG6 1382 aaKnown RBP23.46■■□□□ 1.35
MKRN3-202ENST00000564592 FBLN2P98095 1184 aa23.4■■□□□ 1.34
MKRN3-202ENST00000564592 CHD1O14646 1710 aa23.39■■□□□ 1.33
MKRN3-202ENST00000564592 RIMBP3CA6NJZ7 1639 aa23.37■■□□□ 1.33
MKRN3-202ENST00000564592 RIMBP3BA6NNM3 1639 aa23.37■■□□□ 1.33
MKRN3-202ENST00000564592 RIMBP3Q9UFD9 1639 aa23.37■■□□□ 1.33
MKRN3-202ENST00000564592 ARHGEF11O15085 1522 aa23.32■■□□□ 1.32
MKRN3-202ENST00000564592 SNAPC4Q5SXM2 1469 aa23.3■■□□□ 1.32
MKRN3-202ENST00000564592 WDR97A6NE52 1622 aa23.29■■□□□ 1.32
MKRN3-202ENST00000564592 GRIN2BQ13224 1484 aa23.24■■□□□ 1.31
MKRN3-202ENST00000564592 CHMP7Q8WUX9 453 aaPredicted RBP23.23■■□□□ 1.31
MKRN3-202ENST00000564592 MAGI1Q96QZ7 1491 aaPredicted RBP23.21■■□□□ 1.31
MKRN3-202ENST00000564592 GAPVD1Q14C86 1478 aa23.2■■□□□ 1.3
MKRN3-202ENST00000564592 ABCA10Q8WWZ4 1543 aa23.19■■□□□ 1.3
MKRN3-202ENST00000564592 CYB5RLQ6IPT4 315 aa23.19■■□□□ 1.3
MKRN3-202ENST00000564592 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
MKRN3-202ENST00000564592 WRNQ14191 1432 aaPredicted RBP eCLIP23.16■■□□□ 1.3
MKRN3-202ENST00000564592 SYNJ2O15056 1496 aa23.15■■□□□ 1.3
MKRN3-202ENST00000564592 ABCA5Q8WWZ7 1642 aa23.14■■□□□ 1.29
MKRN3-202ENST00000564592 SYNJ1O43426 1573 aa23.14■■□□□ 1.29
MKRN3-202ENST00000564592 TOP2BQ02880 1626 aa23.12■■□□□ 1.29
MKRN3-202ENST00000564592 BIVM-ERCC5R4GMW8 1640 aa23.11■■□□□ 1.29
MKRN3-202ENST00000564592 CLASP1Q7Z460 1538 aa23.11■■□□□ 1.29
MKRN3-202ENST00000564592 ARAP1Q96P48 1450 aa23.11■■□□□ 1.29
MKRN3-202ENST00000564592 GRIN2AQ12879 1464 aa22.96■■□□□ 1.27
MKRN3-202ENST00000564592 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
MKRN3-202ENST00000564592 FHAD1B1AJZ9 1412 aa22.91■■□□□ 1.26
MKRN3-202ENST00000564592 ERICH3Q5RHP9 1530 aa22.89■■□□□ 1.26
MKRN3-202ENST00000564592 TRHP20396 242 aaPredicted RBP22.88■■□□□ 1.25
MKRN3-202ENST00000564592 CEP170Q5SW79 1584 aa22.88■■□□□ 1.25
MKRN3-202ENST00000564592 NUP160Q12769 1436 aa22.86■■□□□ 1.25
MKRN3-202ENST00000564592 ERCC6L2Q5T890 1561 aa22.82■■□□□ 1.24
MKRN3-202ENST00000564592 SHROOM2Q13796 1616 aa22.73■■□□□ 1.23
MKRN3-202ENST00000564592 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
MKRN3-202ENST00000564592 IGF1RP08069 1367 aa22.7■■□□□ 1.22
MKRN3-202ENST00000564592 KIF27Q86VH2 1401 aa22.69■■□□□ 1.22
MKRN3-202ENST00000564592 JPH4Q96JJ6 628 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms