RNA–Protein interactions for RNA: ENST00000564316.1

STUB1-203, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 3

Gene STUB1, Length 729 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-203ENST00000564316 NISCHQ9Y2I1 1504 aa33■■■□□ 2.87
STUB1-203ENST00000564316 CCDC180Q9P1Z9 1646 aa29.16■■■□□ 2.26
STUB1-203ENST00000564316 ABCC9O60706 1549 aa28.33■■■□□ 2.13
STUB1-203ENST00000564316 ZCCHC6Q5VYS8 1495 aaKnown RBP27.56■■■□□ 2
STUB1-203ENST00000564316 DCAF8L2P0C7V8 631 aa27.48■■□□□ 1.99
STUB1-203ENST00000564316 NACADO15069 1562 aa27.39■■□□□ 1.97
STUB1-203ENST00000564316 RB1CC1Q8TDY2 1594 aa27.35■■□□□ 1.97
STUB1-203ENST00000564316 MYO15BQ96JP2 1530 aa27.32■■□□□ 1.96
STUB1-203ENST00000564316 DCAF1Q9Y4B6 1507 aa27.31■■□□□ 1.96
STUB1-203ENST00000564316 SCRIBQ14160 1630 aa26.66■■□□□ 1.86
STUB1-203ENST00000564316 UNC13AQ9UPW8 1703 aa26.64■■□□□ 1.85
STUB1-203ENST00000564316 PABPN1Q86U42 306 aaKnown RBP eCLIP26.55■■□□□ 1.84
STUB1-203ENST00000564316 BICRAQ9NZM4 1560 aa26.51■■□□□ 1.83
STUB1-203ENST00000564316 SHROOM4Q9ULL8 1493 aa26.28■■□□□ 1.8
STUB1-203ENST00000564316 EIF4G1Q04637 1599 aaKnown RBP25.8■■□□□ 1.72
STUB1-203ENST00000564316 DNAJC5BQ9UF47 199 aa25.77■■□□□ 1.72
STUB1-203ENST00000564316 CECR2Q9BXF3 1484 aa25.69■■□□□ 1.7
STUB1-203ENST00000564316 CC2D2AQ9P2K1 1620 aa25.61■■□□□ 1.69
STUB1-203ENST00000564316 BAZ1AQ9NRL2 1556 aaPredicted RBP25.55■■□□□ 1.68
STUB1-203ENST00000564316 SMARCA4P51532 1647 aa25.52■■□□□ 1.68
STUB1-203ENST00000564316 MROH2BQ7Z745 1585 aa25.44■■□□□ 1.66
STUB1-203ENST00000564316 ATAD2BQ9ULI0 1458 aa25.35■■□□□ 1.65
STUB1-203ENST00000564316 SMARCA2P51531 1590 aa25.31■■□□□ 1.64
STUB1-203ENST00000564316 NCAPD3P42695 1498 aa25.3■■□□□ 1.64
STUB1-203ENST00000564316 PEG3Q9GZU2 1588 aa25.28■■□□□ 1.64
STUB1-203ENST00000564316 RSF1Q96T23 1441 aaPredicted RBP25.27■■□□□ 1.64
STUB1-203ENST00000564316 HMGXB3Q12766 1538 aa25.17■■□□□ 1.62
STUB1-203ENST00000564316 BAZ1BQ9UIG0 1483 aaKnown RBP25.15■■□□□ 1.62
STUB1-203ENST00000564316 WIZO95785 1651 aa25.14■■□□□ 1.62
STUB1-203ENST00000564316 TOP2AP11388 1531 aaKnown RBP24.92■■□□□ 1.58
STUB1-203ENST00000564316 SUPT5HO00267 1087 aaKnown RBP24.85■■□□□ 1.57
STUB1-203ENST00000564316 CCDC88BA6NC98 1476 aa24.64■■□□□ 1.54
STUB1-203ENST00000564316 NESP48681 1621 aa24.6■■□□□ 1.53
STUB1-203ENST00000564316 CADPSQ9ULU8 1353 aa24.58■■□□□ 1.53
STUB1-203ENST00000564316 LAMC3Q9Y6N6 1575 aa24.54■■□□□ 1.52
STUB1-203ENST00000564316 CFTRP13569 1480 aa24.49■■□□□ 1.51
STUB1-203ENST00000564316 PDS5BQ9NTI5 1447 aa24.41■■□□□ 1.5
STUB1-203ENST00000564316 ERCC6Q03468 1493 aa24.4■■□□□ 1.5
STUB1-203ENST00000564316 FANCD2Q9BXW9 1451 aa24.29■■□□□ 1.48
STUB1-203ENST00000564316 KIF21AQ7Z4S6 1674 aa24.24■■□□□ 1.47
STUB1-203ENST00000564316 CEP164Q9UPV0 1460 aa24.23■■□□□ 1.47
STUB1-203ENST00000564316 PRDM2Q13029 1718 aa24.2■■□□□ 1.46
STUB1-203ENST00000564316 MRC2Q9UBG0 1479 aa24.14■■□□□ 1.46
STUB1-203ENST00000564316 THOC2Q8NI27 1593 aaKnown RBP24.13■■□□□ 1.45
STUB1-203ENST00000564316 WDR62O43379 1518 aa24.05■■□□□ 1.44
STUB1-203ENST00000564316 CUX2O14529 1486 aa24.04■■□□□ 1.44
STUB1-203ENST00000564316 URB2Q14146 1524 aaKnown RBP24.03■■□□□ 1.44
STUB1-203ENST00000564316 ABCC8Q09428 1581 aa23.93■■□□□ 1.42
STUB1-203ENST00000564316 TOPBP1Q92547 1522 aa23.93■■□□□ 1.42
STUB1-203ENST00000564316 DNMBPQ6XZF7 1577 aa23.91■■□□□ 1.42
STUB1-203ENST00000564316 CUX1P39880 1505 aa23.84■■□□□ 1.41
STUB1-203ENST00000564316 WRNQ14191 1432 aaPredicted RBP eCLIP23.82■■□□□ 1.4
STUB1-203ENST00000564316 POLA1P09884 1462 aaPredicted RBP23.75■■□□□ 1.39
STUB1-203ENST00000564316 FGD5Q6ZNL6 1462 aa23.73■■□□□ 1.39
STUB1-203ENST00000564316 IFT140Q96RY7 1462 aa23.72■■□□□ 1.39
STUB1-203ENST00000564316 SYNJ1O43426 1573 aa23.71■■□□□ 1.39
STUB1-203ENST00000564316 TOP2BQ02880 1626 aa23.7■■□□□ 1.38
STUB1-203ENST00000564316 BIVM-ERCC5R4GMW8 1640 aa23.67■■□□□ 1.38
STUB1-203ENST00000564316 SOGA1O94964 1423 aa23.67■■□□□ 1.38
STUB1-203ENST00000564316 RAD54L2Q9Y4B4 1467 aa23.65■■□□□ 1.38
STUB1-203ENST00000564316 TARBP1Q13395 1621 aaKnown RBP23.62■■□□□ 1.37
STUB1-203ENST00000564316 ZNF608Q9ULD9 1512 aaPredicted RBP23.59■■□□□ 1.37
STUB1-203ENST00000564316 ABCA10Q8WWZ4 1543 aa23.51■■□□□ 1.35
STUB1-203ENST00000564316 TDRD9Q8NDG6 1382 aaKnown RBP23.51■■□□□ 1.35
STUB1-203ENST00000564316 AQRO60306 1485 aaKnown RBP eCLIP23.49■■□□□ 1.352e-7■■■■□ 22
STUB1-203ENST00000564316 EIF4G3O43432 1585 aaKnown RBP23.48■■□□□ 1.35
STUB1-203ENST00000564316 WDR97A6NE52 1622 aa23.46■■□□□ 1.35
STUB1-203ENST00000564316 TRIM41Q8WV44 630 aa23.45■■□□□ 1.34
STUB1-203ENST00000564316 GAPVD1Q14C86 1478 aa23.38■■□□□ 1.33
STUB1-203ENST00000564316 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
STUB1-203ENST00000564316 CHIC1Q5VXU3 224 aa23.35■■□□□ 1.33
STUB1-203ENST00000564316 GRIN2BQ13224 1484 aa23.35■■□□□ 1.33
STUB1-203ENST00000564316 KIF27Q86VH2 1401 aa23.3■■□□□ 1.32
STUB1-203ENST00000564316 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
STUB1-203ENST00000564316 MAGI1Q96QZ7 1491 aaPredicted RBP23.25■■□□□ 1.31
STUB1-203ENST00000564316 PBRM1Q86U86 1689 aa23.25■■□□□ 1.31
STUB1-203ENST00000564316 ERICH3Q5RHP9 1530 aa23.23■■□□□ 1.31
STUB1-203ENST00000564316 IGF1RP08069 1367 aa23.17■■□□□ 1.3
STUB1-203ENST00000564316 RUSC2Q8N2Y8 1516 aa23.17■■□□□ 1.3
STUB1-203ENST00000564316 SYNJ2O15056 1496 aa23.17■■□□□ 1.3
STUB1-203ENST00000564316 FBLN2P98095 1184 aa23.16■■□□□ 1.3
STUB1-203ENST00000564316 CHMP7Q8WUX9 453 aaPredicted RBP23.15■■□□□ 1.3
STUB1-203ENST00000564316 FHAD1B1AJZ9 1412 aa23.14■■□□□ 1.29
STUB1-203ENST00000564316 ADAMTS12P58397 1594 aa23.14■■□□□ 1.29
STUB1-203ENST00000564316 OSCARQ8IYS5 282 aa23.11■■□□□ 1.29
STUB1-203ENST00000564316 CHD1O14646 1710 aa23.08■■□□□ 1.28
STUB1-203ENST00000564316 GRIN2AQ12879 1464 aa23.05■■□□□ 1.28
STUB1-203ENST00000564316 CARMIL1Q5VZK9 1371 aa23.04■■□□□ 1.28
STUB1-203ENST00000564316 CUL7Q14999 1698 aa23.04■■□□□ 1.28
STUB1-203ENST00000564316 EEA1Q15075 1411 aa23.03■■□□□ 1.28
STUB1-203ENST00000564316 DNAJC5Q9H3Z4 198 aa22.99■■□□□ 1.27
STUB1-203ENST00000564316 CSRNP3Q8WYN3 585 aa22.97■■□□□ 1.27
STUB1-203ENST00000564316 FAM9AQ8IZU1 332 aaPredicted RBP22.96■■□□□ 1.27
STUB1-203ENST00000564316 NUP160Q12769 1436 aa22.94■■□□□ 1.26
STUB1-203ENST00000564316 PRXQ9BXM0 1461 aa22.92■■□□□ 1.26
STUB1-203ENST00000564316 RAPGEF2Q9Y4G8 1499 aa22.92■■□□□ 1.26
STUB1-203ENST00000564316 CEP170Q5SW79 1584 aa22.91■■□□□ 1.26
STUB1-203ENST00000564316 CLASP1Q7Z460 1538 aa22.89■■□□□ 1.26
STUB1-203ENST00000564316 KIAA0586Q9BVV6 1533 aa22.78■■□□□ 1.24
STUB1-203ENST00000564316 KIF21BO75037 1637 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 199.9 ms