RNA–Protein interactions for RNA: ENST00000564040.6

NAE1-213, Transcript of NEDD8 activating enzyme E1 subunit 1, humanhuman

TSL 5

Gene NAE1, Length 536 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NAE1-213ENST00000564040 NISCHQ9Y2I1 1504 aa51.69■■■■■ 5.87
NAE1-213ENST00000564040 CCDC180Q9P1Z9 1646 aa46.16■■■■■ 4.98
NAE1-213ENST00000564040 ABCC9O60706 1549 aa45.86■■■■■ 4.93
NAE1-213ENST00000564040 RB1CC1Q8TDY2 1594 aa43.75■■■■■ 4.59
NAE1-213ENST00000564040 DCAF8L2P0C7V8 631 aa43.55■■■■■ 4.56
NAE1-213ENST00000564040 NACADO15069 1562 aa43.54■■■■■ 4.56
NAE1-213ENST00000564040 MYO15BQ96JP2 1530 aa43.06■■■■■ 4.48
NAE1-213ENST00000564040 ZCCHC6Q5VYS8 1495 aaKnown RBP42.91■■■■■ 4.46
NAE1-213ENST00000564040 UNC13AQ9UPW8 1703 aa42.85■■■■■ 4.45
NAE1-213ENST00000564040 PABPN1Q86U42 306 aaKnown RBP eCLIP42.81■■■■■ 4.44
NAE1-213ENST00000564040 DNAJC5BQ9UF47 199 aa42.74■■■■■ 4.43
NAE1-213ENST00000564040 DCAF1Q9Y4B6 1507 aa42.67■■■■■ 4.42
NAE1-213ENST00000564040 BICRAQ9NZM4 1560 aa42.53■■■■■ 4.4
NAE1-213ENST00000564040 SCRIBQ14160 1630 aa42.17■■■■■ 4.34
NAE1-213ENST00000564040 SHROOM4Q9ULL8 1493 aa41.85■■■■■ 4.29
NAE1-213ENST00000564040 CC2D2AQ9P2K1 1620 aa41.43■■■■■ 4.22
NAE1-213ENST00000564040 EIF4G1Q04637 1599 aaKnown RBP41.42■■■■■ 4.22
NAE1-213ENST00000564040 CECR2Q9BXF3 1484 aa41.23■■■■■ 4.19
NAE1-213ENST00000564040 SMARCA4P51532 1647 aa40.24■■■■■ 4.03
NAE1-213ENST00000564040 NCAPD3P42695 1498 aa40.22■■■■■ 4.03
NAE1-213ENST00000564040 ATAD2BQ9ULI0 1458 aa40.18■■■■■ 4.02
NAE1-213ENST00000564040 BAZ1AQ9NRL2 1556 aaPredicted RBP40.07■■■■■ 4.01
NAE1-213ENST00000564040 SMARCA2P51531 1590 aa40.04■■■■■ 4
NAE1-213ENST00000564040 HMGXB3Q12766 1538 aa39.93■■■■□ 3.98
NAE1-213ENST00000564040 MROH2BQ7Z745 1585 aa39.88■■■■□ 3.97
NAE1-213ENST00000564040 PEG3Q9GZU2 1588 aa39.82■■■■□ 3.97
NAE1-213ENST00000564040 BAZ1BQ9UIG0 1483 aaKnown RBP39.8■■■■□ 3.96
NAE1-213ENST00000564040 NESP48681 1621 aa39.54■■■■□ 3.92
NAE1-213ENST00000564040 ERCC6Q03468 1493 aa39.51■■■■□ 3.92
NAE1-213ENST00000564040 WIZO95785 1651 aa39.43■■■■□ 3.9
NAE1-213ENST00000564040 CUX2O14529 1486 aa39.27■■■■□ 3.88
NAE1-213ENST00000564040 LAMC3Q9Y6N6 1575 aa39.24■■■■□ 3.87
NAE1-213ENST00000564040 RSF1Q96T23 1441 aaPredicted RBP39.19■■■■□ 3.86
NAE1-213ENST00000564040 CADPSQ9ULU8 1353 aa39.04■■■■□ 3.84
NAE1-213ENST00000564040 KIF21AQ7Z4S6 1674 aa39.01■■■■□ 3.84
NAE1-213ENST00000564040 PDS5BQ9NTI5 1447 aa38.99■■■■□ 3.83
NAE1-213ENST00000564040 THOC2Q8NI27 1593 aaKnown RBP38.99■■■■□ 3.83
NAE1-213ENST00000564040 TOP2AP11388 1531 aaKnown RBP38.89■■■■□ 3.82
NAE1-213ENST00000564040 DNAJC5Q9H3Z4 198 aa38.86■■■■□ 3.81
NAE1-213ENST00000564040 CFTRP13569 1480 aa38.66■■■■□ 3.78
NAE1-213ENST00000564040 MRC2Q9UBG0 1479 aa38.64■■■■□ 3.78
NAE1-213ENST00000564040 FANCD2Q9BXW9 1451 aa38.6■■■■□ 3.77
NAE1-213ENST00000564040 CEP164Q9UPV0 1460 aa38.57■■■■□ 3.76
NAE1-213ENST00000564040 WDR62O43379 1518 aa38.53■■■■□ 3.76
NAE1-213ENST00000564040 CCDC88BA6NC98 1476 aa38.51■■■■□ 3.76
NAE1-213ENST00000564040 PRDM2Q13029 1718 aa38.29■■■■□ 3.72
NAE1-213ENST00000564040 URB2Q14146 1524 aaKnown RBP38.28■■■■□ 3.72
NAE1-213ENST00000564040 TOPBP1Q92547 1522 aa37.92■■■■□ 3.66
NAE1-213ENST00000564040 SUPT5HO00267 1087 aaKnown RBP37.83■■■■□ 3.65
NAE1-213ENST00000564040 ABCC8Q09428 1581 aa37.8■■■■□ 3.64
NAE1-213ENST00000564040 DNMBPQ6XZF7 1577 aa37.79■■■■□ 3.64
NAE1-213ENST00000564040 IFT140Q96RY7 1462 aa37.78■■■■□ 3.64
NAE1-213ENST00000564040 ZNF608Q9ULD9 1512 aaPredicted RBP37.76■■■■□ 3.63
NAE1-213ENST00000564040 OSCARQ8IYS5 282 aa37.61■■■■□ 3.61
NAE1-213ENST00000564040 TARBP1Q13395 1621 aaKnown RBP37.56■■■■□ 3.6
NAE1-213ENST00000564040 POLA1P09884 1462 aaPredicted RBP37.56■■■■□ 3.6
NAE1-213ENST00000564040 EIF4G3O43432 1585 aaKnown RBP37.52■■■■□ 3.6
NAE1-213ENST00000564040 AQRO60306 1485 aaKnown RBP eCLIP37.47■■■■□ 3.594e-7■■■■□ 21.6
NAE1-213ENST00000564040 RAD54L2Q9Y4B4 1467 aa37.45■■■■□ 3.59
NAE1-213ENST00000564040 CUX1P39880 1505 aa37.42■■■■□ 3.58
NAE1-213ENST00000564040 SOGA1O94964 1423 aa37.41■■■■□ 3.58
NAE1-213ENST00000564040 FGD5Q6ZNL6 1462 aa37.39■■■■□ 3.58
NAE1-213ENST00000564040 TRIM41Q8WV44 630 aa37.36■■■■□ 3.57
NAE1-213ENST00000564040 TDRD9Q8NDG6 1382 aaKnown RBP37.3■■■■□ 3.56
NAE1-213ENST00000564040 CHD1O14646 1710 aa37.19■■■■□ 3.54
NAE1-213ENST00000564040 FBLN2P98095 1184 aa37.15■■■■□ 3.54
NAE1-213ENST00000564040 WDR97A6NE52 1622 aa37.11■■■■□ 3.53
NAE1-213ENST00000564040 RIMBP3CA6NJZ7 1639 aa37.08■■■■□ 3.53
NAE1-213ENST00000564040 RIMBP3BA6NNM3 1639 aa37.08■■■■□ 3.53
NAE1-213ENST00000564040 RIMBP3Q9UFD9 1639 aa37.08■■■■□ 3.53
NAE1-213ENST00000564040 SNAPC4Q5SXM2 1469 aa37.06■■■■□ 3.52
NAE1-213ENST00000564040 GRIN2BQ13224 1484 aa37■■■■□ 3.51
NAE1-213ENST00000564040 ARHGEF11O15085 1522 aa36.98■■■■□ 3.51
NAE1-213ENST00000564040 ABCA10Q8WWZ4 1543 aa36.96■■■■□ 3.51
NAE1-213ENST00000564040 GAPVD1Q14C86 1478 aa36.94■■■■□ 3.5
NAE1-213ENST00000564040 MAGI1Q96QZ7 1491 aaPredicted RBP36.94■■■■□ 3.5
NAE1-213ENST00000564040 WRNQ14191 1432 aaPredicted RBP eCLIP36.93■■■■□ 3.5
NAE1-213ENST00000564040 SYNJ1O43426 1573 aa36.92■■■■□ 3.5
NAE1-213ENST00000564040 TOP2BQ02880 1626 aa36.92■■■■□ 3.5
NAE1-213ENST00000564040 CHMP7Q8WUX9 453 aaPredicted RBP36.91■■■■□ 3.5
NAE1-213ENST00000564040 BIVM-ERCC5R4GMW8 1640 aa36.91■■■■□ 3.5
NAE1-213ENST00000564040 PBRM1Q86U86 1689 aa36.9■■■■□ 3.5
NAE1-213ENST00000564040 ABCA5Q8WWZ7 1642 aa36.88■■■■□ 3.49
NAE1-213ENST00000564040 SYNJ2O15056 1496 aa36.83■■■■□ 3.49
NAE1-213ENST00000564040 CLASP1Q7Z460 1538 aa36.75■■■■□ 3.47
NAE1-213ENST00000564040 CYB5RLQ6IPT4 315 aa36.74■■■■□ 3.47
NAE1-213ENST00000564040 ARAP1Q96P48 1450 aa36.66■■■■□ 3.46
NAE1-213ENST00000564040 ADAMTS12P58397 1594 aa36.56■■■■□ 3.44
NAE1-213ENST00000564040 GRIN2AQ12879 1464 aa36.53■■■■□ 3.44
NAE1-213ENST00000564040 ERICH3Q5RHP9 1530 aa36.49■■■■□ 3.43
NAE1-213ENST00000564040 FHAD1B1AJZ9 1412 aa36.47■■■■□ 3.43
NAE1-213ENST00000564040 CEP170Q5SW79 1584 aa36.41■■■■□ 3.42
NAE1-213ENST00000564040 NUP160Q12769 1436 aa36.38■■■■□ 3.41
NAE1-213ENST00000564040 ERCC6L2Q5T890 1561 aa36.27■■■■□ 3.4
NAE1-213ENST00000564040 TRHP20396 242 aaPredicted RBP36.19■■■■□ 3.38
NAE1-213ENST00000564040 SHROOM2Q13796 1616 aa36.19■■■■□ 3.38
NAE1-213ENST00000564040 KIF27Q86VH2 1401 aa36.18■■■■□ 3.38
NAE1-213ENST00000564040 IGF1RP08069 1367 aa36.18■■■■□ 3.38
NAE1-213ENST00000564040 JPH4Q96JJ6 628 aa36.07■■■■□ 3.36
NAE1-213ENST00000564040 CUL7Q14999 1698 aa36.03■■■■□ 3.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms