RNA–Protein interactions for RNA: ENST00000564033.1

SLC9A3R2-205, Transcript of SLC9A3 regulator 2, humanhuman

TSL 2

Gene SLC9A3R2, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R2-205ENST00000564033 NISCHQ9Y2I1 1504 aa46.3■■■■■ 5
SLC9A3R2-205ENST00000564033 ABCC9O60706 1549 aa41.73■■■■■ 4.27
SLC9A3R2-205ENST00000564033 CCDC180Q9P1Z9 1646 aa41.67■■■■■ 4.26
SLC9A3R2-205ENST00000564033 RB1CC1Q8TDY2 1594 aa39.66■■■■□ 3.94
SLC9A3R2-205ENST00000564033 NACADO15069 1562 aa39.33■■■■□ 3.89
SLC9A3R2-205ENST00000564033 DNAJC5BQ9UF47 199 aa39.08■■■■□ 3.85
SLC9A3R2-205ENST00000564033 DCAF8L2P0C7V8 631 aa39.04■■■■□ 3.84
SLC9A3R2-205ENST00000564033 UNC13AQ9UPW8 1703 aa38.87■■■■□ 3.81
SLC9A3R2-205ENST00000564033 PABPN1Q86U42 306 aaKnown RBP eCLIP38.75■■■■□ 3.797e-9■■■□□ 17.8
SLC9A3R2-205ENST00000564033 MYO15BQ96JP2 1530 aa38.7■■■■□ 3.79
SLC9A3R2-205ENST00000564033 BICRAQ9NZM4 1560 aa38.53■■■■□ 3.76
SLC9A3R2-205ENST00000564033 ZCCHC6Q5VYS8 1495 aaKnown RBP38.41■■■■□ 3.74
SLC9A3R2-205ENST00000564033 DCAF1Q9Y4B6 1507 aa38.2■■■■□ 3.71
SLC9A3R2-205ENST00000564033 SCRIBQ14160 1630 aa38.02■■■■□ 3.68
SLC9A3R2-205ENST00000564033 SHROOM4Q9ULL8 1493 aa37.95■■■■□ 3.67
SLC9A3R2-205ENST00000564033 CC2D2AQ9P2K1 1620 aa37.7■■■■□ 3.63
SLC9A3R2-205ENST00000564033 EIF4G1Q04637 1599 aaKnown RBP37.59■■■■□ 3.61
SLC9A3R2-205ENST00000564033 CECR2Q9BXF3 1484 aa37.57■■■■□ 3.6
SLC9A3R2-205ENST00000564033 NCAPD3P42695 1498 aa36.25■■■■□ 3.39
SLC9A3R2-205ENST00000564033 SMARCA4P51532 1647 aa36.21■■■■□ 3.39
SLC9A3R2-205ENST00000564033 ATAD2BQ9ULI0 1458 aa36.18■■■■□ 3.38
SLC9A3R2-205ENST00000564033 SMARCA2P51531 1590 aa36.1■■■■□ 3.37
SLC9A3R2-205ENST00000564033 HMGXB3Q12766 1538 aa36.08■■■■□ 3.37
SLC9A3R2-205ENST00000564033 ERCC6Q03468 1493 aa36.04■■■■□ 3.36
SLC9A3R2-205ENST00000564033 BAZ1AQ9NRL2 1556 aaPredicted RBP35.98■■■■□ 3.35
SLC9A3R2-205ENST00000564033 CUX2O14529 1486 aa35.95■■■■□ 3.35
SLC9A3R2-205ENST00000564033 DNAJC5Q9H3Z4 198 aa35.89■■■■□ 3.34
SLC9A3R2-205ENST00000564033 BAZ1BQ9UIG0 1483 aaKnown RBP35.88■■■■□ 3.33
SLC9A3R2-205ENST00000564033 NESP48681 1621 aa35.83■■■■□ 3.33
SLC9A3R2-205ENST00000564033 PEG3Q9GZU2 1588 aa35.8■■■■□ 3.32
SLC9A3R2-205ENST00000564033 MROH2BQ7Z745 1585 aa35.72■■■■□ 3.31
SLC9A3R2-205ENST00000564033 THOC2Q8NI27 1593 aaKnown RBP35.55■■■■□ 3.28
SLC9A3R2-205ENST00000564033 LAMC3Q9Y6N6 1575 aa35.53■■■■□ 3.28
SLC9A3R2-205ENST00000564033 KIF21AQ7Z4S6 1674 aa35.44■■■■□ 3.26
SLC9A3R2-205ENST00000564033 WIZO95785 1651 aa35.33■■■■□ 3.25
SLC9A3R2-205ENST00000564033 PDS5BQ9NTI5 1447 aa35.26■■■■□ 3.24
SLC9A3R2-205ENST00000564033 CADPSQ9ULU8 1353 aa35.14■■■■□ 3.22
SLC9A3R2-205ENST00000564033 MRC2Q9UBG0 1479 aa35.05■■■■□ 3.2
SLC9A3R2-205ENST00000564033 WDR62O43379 1518 aa34.98■■■■□ 3.19
SLC9A3R2-205ENST00000564033 CEP164Q9UPV0 1460 aa34.9■■■■□ 3.18
SLC9A3R2-205ENST00000564033 RSF1Q96T23 1441 aaPredicted RBP34.89■■■■□ 3.18
SLC9A3R2-205ENST00000564033 TOP2AP11388 1531 aaKnown RBP34.86■■■■□ 3.17
SLC9A3R2-205ENST00000564033 FANCD2Q9BXW9 1451 aa34.84■■■■□ 3.17
SLC9A3R2-205ENST00000564033 CFTRP13569 1480 aa34.77■■■■□ 3.16
SLC9A3R2-205ENST00000564033 URB2Q14146 1524 aaKnown RBP34.57■■■■□ 3.12
SLC9A3R2-205ENST00000564033 PRDM2Q13029 1718 aa34.57■■■■□ 3.12
SLC9A3R2-205ENST00000564033 TRIM41Q8WV44 630 aa34.41■■■■□ 3.1
SLC9A3R2-205ENST00000564033 CCDC88BA6NC98 1476 aa34.39■■■■□ 3.1
SLC9A3R2-205ENST00000564033 TOPBP1Q92547 1522 aa34.18■■■■□ 3.06
SLC9A3R2-205ENST00000564033 OSCARQ8IYS5 282 aa34.17■■■■□ 3.06
SLC9A3R2-205ENST00000564033 ZNF608Q9ULD9 1512 aaPredicted RBP34.16■■■■□ 3.06
SLC9A3R2-205ENST00000564033 IFT140Q96RY7 1462 aa34.16■■■■□ 3.06
SLC9A3R2-205ENST00000564033 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
SLC9A3R2-205ENST00000564033 EIF4G3O43432 1585 aaKnown RBP34.05■■■■□ 3.04
SLC9A3R2-205ENST00000564033 ABCC8Q09428 1581 aa33.99■■■■□ 3.03
SLC9A3R2-205ENST00000564033 RIMBP3CA6NJZ7 1639 aa33.94■■■■□ 3.02
SLC9A3R2-205ENST00000564033 RIMBP3BA6NNM3 1639 aa33.94■■■■□ 3.02
SLC9A3R2-205ENST00000564033 RIMBP3Q9UFD9 1639 aa33.94■■■■□ 3.02
SLC9A3R2-205ENST00000564033 TARBP1Q13395 1621 aaKnown RBP33.9■■■■□ 3.02
SLC9A3R2-205ENST00000564033 POLA1P09884 1462 aaPredicted RBP33.82■■■■□ 3.01
SLC9A3R2-205ENST00000564033 CHD1O14646 1710 aa33.82■■■■□ 3
SLC9A3R2-205ENST00000564033 ARHGEF11O15085 1522 aa33.79■■■■□ 3
SLC9A3R2-205ENST00000564033 AQRO60306 1485 aaKnown RBP eCLIP33.79■■■■□ 35e-7■■■■■ 29.6
SLC9A3R2-205ENST00000564033 RAD54L2Q9Y4B4 1467 aa33.69■■■□□ 2.98
SLC9A3R2-205ENST00000564033 FGD5Q6ZNL6 1462 aa33.62■■■□□ 2.97
SLC9A3R2-205ENST00000564033 SOGA1O94964 1423 aa33.59■■■□□ 2.97
SLC9A3R2-205ENST00000564033 CUX1P39880 1505 aa33.58■■■□□ 2.97
SLC9A3R2-205ENST00000564033 FBLN2P98095 1184 aa33.56■■■□□ 2.96
SLC9A3R2-205ENST00000564033 TDRD9Q8NDG6 1382 aaKnown RBP33.56■■■□□ 2.96
SLC9A3R2-205ENST00000564033 SNAPC4Q5SXM2 1469 aa33.52■■■□□ 2.96
SLC9A3R2-205ENST00000564033 WDR97A6NE52 1622 aa33.52■■■□□ 2.96
SLC9A3R2-205ENST00000564033 ARAP1Q96P48 1450 aa33.46■■■□□ 2.95
SLC9A3R2-205ENST00000564033 CYB5RLQ6IPT4 315 aa33.42■■■□□ 2.94
SLC9A3R2-205ENST00000564033 MAGI1Q96QZ7 1491 aaPredicted RBP33.37■■■□□ 2.93
SLC9A3R2-205ENST00000564033 CLASP1Q7Z460 1538 aa33.37■■■□□ 2.93
SLC9A3R2-205ENST00000564033 GRIN2BQ13224 1484 aa33.35■■■□□ 2.93
SLC9A3R2-205ENST00000564033 PBRM1Q86U86 1689 aa33.35■■■□□ 2.93
SLC9A3R2-205ENST00000564033 SYNJ1O43426 1573 aa33.33■■■□□ 2.93
SLC9A3R2-205ENST00000564033 SUPT5HO00267 1087 aaKnown RBP33.27■■■□□ 2.92
SLC9A3R2-205ENST00000564033 SYNJ2O15056 1496 aa33.26■■■□□ 2.92
SLC9A3R2-205ENST00000564033 CHMP7Q8WUX9 453 aaPredicted RBP33.26■■■□□ 2.91
SLC9A3R2-205ENST00000564033 ABCA5Q8WWZ7 1642 aa33.23■■■□□ 2.91
SLC9A3R2-205ENST00000564033 GAPVD1Q14C86 1478 aa33.22■■■□□ 2.91
SLC9A3R2-205ENST00000564033 ABCA10Q8WWZ4 1543 aa33.18■■■□□ 2.9
SLC9A3R2-205ENST00000564033 TRHP20396 242 aaPredicted RBP33.11■■■□□ 2.89
SLC9A3R2-205ENST00000564033 BIVM-ERCC5R4GMW8 1640 aa33.04■■■□□ 2.88
SLC9A3R2-205ENST00000564033 ADAMTS12P58397 1594 aa33.01■■■□□ 2.88
SLC9A3R2-205ENST00000564033 TOP2BQ02880 1626 aa33.01■■■□□ 2.87
SLC9A3R2-205ENST00000564033 WRNQ14191 1432 aaPredicted RBP eCLIP33■■■□□ 2.87
SLC9A3R2-205ENST00000564033 GRIN2AQ12879 1464 aa32.96■■■□□ 2.87
SLC9A3R2-205ENST00000564033 CEP170Q5SW79 1584 aa32.9■■■□□ 2.86
SLC9A3R2-205ENST00000564033 ERCC6L2Q5T890 1561 aa32.87■■■□□ 2.85
SLC9A3R2-205ENST00000564033 NUP160Q12769 1436 aa32.82■■■□□ 2.84
SLC9A3R2-205ENST00000564033 FHAD1B1AJZ9 1412 aa32.78■■■□□ 2.84
SLC9A3R2-205ENST00000564033 ERICH3Q5RHP9 1530 aa32.77■■■□□ 2.84
SLC9A3R2-205ENST00000564033 SHROOM2Q13796 1616 aa32.74■■■□□ 2.83
SLC9A3R2-205ENST00000564033 RUSC2Q8N2Y8 1516 aa32.56■■■□□ 2.8
SLC9A3R2-205ENST00000564033 PRG4Q92954 1404 aaPredicted RBP32.51■■■□□ 2.79
SLC9A3R2-205ENST00000564033 KIF13AQ9H1H9 1805 aa32.37■■■□□ 2.77
SLC9A3R2-205ENST00000564033 JPH4Q96JJ6 628 aa32.36■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 1207.7 ms