RNA–Protein interactions for RNA: ENST00000563900.5

NSMCE1-206, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-206ENST00000563900 NISCHQ9Y2I1 1504 aa21.51■■□□□ 1.03
NSMCE1-206ENST00000563900 CCDC180Q9P1Z9 1646 aa19.11■□□□□ 0.65
NSMCE1-206ENST00000563900 ABCC9O60706 1549 aa18.56■□□□□ 0.56
NSMCE1-206ENST00000563900 ZCCHC6Q5VYS8 1495 aaKnown RBP17.97■□□□□ 0.47
NSMCE1-206ENST00000563900 NACADO15069 1562 aa17.94■□□□□ 0.46
NSMCE1-206ENST00000563900 MYO15BQ96JP2 1530 aa17.92■□□□□ 0.46
NSMCE1-206ENST00000563900 RB1CC1Q8TDY2 1594 aa17.91■□□□□ 0.46
NSMCE1-206ENST00000563900 DCAF1Q9Y4B6 1507 aa17.86■□□□□ 0.45
NSMCE1-206ENST00000563900 DCAF8L2P0C7V8 631 aa17.76■□□□□ 0.43
NSMCE1-206ENST00000563900 UNC13AQ9UPW8 1703 aa17.52■□□□□ 0.4
NSMCE1-206ENST00000563900 BICRAQ9NZM4 1560 aa17.43■□□□□ 0.38
NSMCE1-206ENST00000563900 SCRIBQ14160 1630 aa17.39■□□□□ 0.37
NSMCE1-206ENST00000563900 PABPN1Q86U42 306 aaKnown RBP eCLIP17.33■□□□□ 0.36
NSMCE1-206ENST00000563900 SHROOM4Q9ULL8 1493 aa17.27■□□□□ 0.36
NSMCE1-206ENST00000563900 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
NSMCE1-206ENST00000563900 EIF4G1Q04637 1599 aaKnown RBP16.93■□□□□ 0.3
NSMCE1-206ENST00000563900 CC2D2AQ9P2K1 1620 aa16.82■□□□□ 0.28
NSMCE1-206ENST00000563900 CECR2Q9BXF3 1484 aa16.74■□□□□ 0.27
NSMCE1-206ENST00000563900 SMARCA4P51532 1647 aa16.67■□□□□ 0.26
NSMCE1-206ENST00000563900 BAZ1AQ9NRL2 1556 aaPredicted RBP16.66■□□□□ 0.26
NSMCE1-206ENST00000563900 CHIC1Q5VXU3 224 aa16.62■□□□□ 0.25
NSMCE1-206ENST00000563900 MROH2BQ7Z745 1585 aa16.58■□□□□ 0.24
NSMCE1-206ENST00000563900 NCAPD3P42695 1498 aa16.57■□□□□ 0.24
NSMCE1-206ENST00000563900 ATAD2BQ9ULI0 1458 aa16.57■□□□□ 0.24
NSMCE1-206ENST00000563900 PEG3Q9GZU2 1588 aa16.56■□□□□ 0.24
NSMCE1-206ENST00000563900 SMARCA2P51531 1590 aa16.55■□□□□ 0.24
NSMCE1-206ENST00000563900 HMGXB3Q12766 1538 aa16.5■□□□□ 0.23
NSMCE1-206ENST00000563900 RSF1Q96T23 1441 aaPredicted RBP16.42■□□□□ 0.22
NSMCE1-206ENST00000563900 BAZ1BQ9UIG0 1483 aaKnown RBP16.41■□□□□ 0.22
NSMCE1-206ENST00000563900 WIZO95785 1651 aa16.37■□□□□ 0.21
NSMCE1-206ENST00000563900 AEBP2Q6ZN18 517 aaPredicted RBP16.28■□□□□ 0.2
NSMCE1-206ENST00000563900 TOP2AP11388 1531 aaKnown RBP16.24■□□□□ 0.19
NSMCE1-206ENST00000563900 NESP48681 1621 aa16.11■□□□□ 0.17
NSMCE1-206ENST00000563900 LAMC3Q9Y6N6 1575 aa16.09■□□□□ 0.17
NSMCE1-206ENST00000563900 CADPSQ9ULU8 1353 aa16.06■□□□□ 0.16
NSMCE1-206ENST00000563900 CCDC88BA6NC98 1476 aa16.03■□□□□ 0.16
NSMCE1-206ENST00000563900 CFTRP13569 1480 aa16■□□□□ 0.15
NSMCE1-206ENST00000563900 ERCC6Q03468 1493 aa15.97■□□□□ 0.15
NSMCE1-206ENST00000563900 PDS5BQ9NTI5 1447 aa15.95■□□□□ 0.14
NSMCE1-206ENST00000563900 SUPT5HO00267 1087 aaKnown RBP15.92■□□□□ 0.14
NSMCE1-206ENST00000563900 KIF21AQ7Z4S6 1674 aa15.91■□□□□ 0.14
NSMCE1-206ENST00000563900 THOC2Q8NI27 1593 aaKnown RBP15.89■□□□□ 0.13
NSMCE1-206ENST00000563900 FANCD2Q9BXW9 1451 aa15.86■□□□□ 0.13
NSMCE1-206ENST00000563900 PRDM2Q13029 1718 aa15.85■□□□□ 0.13
NSMCE1-206ENST00000563900 CUX2O14529 1486 aa15.84■□□□□ 0.13
NSMCE1-206ENST00000563900 CEP164Q9UPV0 1460 aa15.83■□□□□ 0.12
NSMCE1-206ENST00000563900 MRC2Q9UBG0 1479 aa15.81■□□□□ 0.12
NSMCE1-206ENST00000563900 WDR62O43379 1518 aa15.78■□□□□ 0.12
NSMCE1-206ENST00000563900 URB2Q14146 1524 aaKnown RBP15.73■□□□□ 0.11
NSMCE1-206ENST00000563900 TOPBP1Q92547 1522 aa15.63■□□□□ 0.09
NSMCE1-206ENST00000563900 ABCC8Q09428 1581 aa15.62■□□□□ 0.09
NSMCE1-206ENST00000563900 DNMBPQ6XZF7 1577 aa15.62■□□□□ 0.09
NSMCE1-206ENST00000563900 CUX1P39880 1505 aa15.55■□□□□ 0.08
NSMCE1-206ENST00000563900 IFT140Q96RY7 1462 aa15.52■□□□□ 0.07
NSMCE1-206ENST00000563900 POLA1P09884 1462 aaPredicted RBP15.51■□□□□ 0.07
NSMCE1-206ENST00000563900 TARBP1Q13395 1621 aaKnown RBP15.47■□□□□ 0.07
NSMCE1-206ENST00000563900 FGD5Q6ZNL6 1462 aa15.46■□□□□ 0.07
NSMCE1-206ENST00000563900 WRNQ14191 1432 aaPredicted RBP eCLIP15.45■□□□□ 0.06
NSMCE1-206ENST00000563900 ZNF608Q9ULD9 1512 aaPredicted RBP15.43■□□□□ 0.06
NSMCE1-206ENST00000563900 TOP2BQ02880 1626 aa15.43■□□□□ 0.06
NSMCE1-206ENST00000563900 BIVM-ERCC5R4GMW8 1640 aa15.43■□□□□ 0.06
NSMCE1-206ENST00000563900 SYNJ1O43426 1573 aa15.43■□□□□ 0.06
NSMCE1-206ENST00000563900 RAD54L2Q9Y4B4 1467 aa15.41■□□□□ 0.06
NSMCE1-206ENST00000563900 SOGA1O94964 1423 aa15.4■□□□□ 0.06
NSMCE1-206ENST00000563900 EIF4G3O43432 1585 aaKnown RBP15.38■□□□□ 0.05
NSMCE1-206ENST00000563900 WDR97A6NE52 1622 aa15.38■□□□□ 0.05
NSMCE1-206ENST00000563900 ABCA10Q8WWZ4 1543 aa15.35■□□□□ 0.05
NSMCE1-206ENST00000563900 AQRO60306 1485 aaKnown RBP eCLIP15.33■□□□□ 0.04
NSMCE1-206ENST00000563900 TDRD9Q8NDG6 1382 aaKnown RBP15.31■□□□□ 0.04
NSMCE1-206ENST00000563900 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
NSMCE1-206ENST00000563900 DNAJC5Q9H3Z4 198 aa15.25■□□□□ 0.03
NSMCE1-206ENST00000563900 GRIN2BQ13224 1484 aa15.24■□□□□ 0.03
NSMCE1-206ENST00000563900 GAPVD1Q14C86 1478 aa15.24■□□□□ 0.03
NSMCE1-206ENST00000563900 PBRM1Q86U86 1689 aa15.21■□□□□ 0.03
NSMCE1-206ENST00000563900 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
NSMCE1-206ENST00000563900 MAGI1Q96QZ7 1491 aaPredicted RBP15.2■□□□□ 0.02
NSMCE1-206ENST00000563900 ERICH3Q5RHP9 1530 aa15.16■□□□□ 0.02
NSMCE1-206ENST00000563900 CHD1O14646 1710 aa15.15■□□□□ 0.02
NSMCE1-206ENST00000563900 SYNJ2O15056 1496 aa15.14■□□□□ 0.01
NSMCE1-206ENST00000563900 ADAMTS12P58397 1594 aa15.13■□□□□ 0.01
NSMCE1-206ENST00000563900 OSCARQ8IYS5 282 aa15.13■□□□□ 0.01
NSMCE1-206ENST00000563900 KIF27Q86VH2 1401 aa15.11■□□□□ 0.01
NSMCE1-206ENST00000563900 FHAD1B1AJZ9 1412 aa15.09■□□□□ 0.01
NSMCE1-206ENST00000563900 IGF1RP08069 1367 aa15.07■□□□□ 0
NSMCE1-206ENST00000563900 GRIN2AQ12879 1464 aa15.06■□□□□ 0
NSMCE1-206ENST00000563900 CHMP7Q8WUX9 453 aaPredicted RBP15.05■□□□□ -0
NSMCE1-206ENST00000563900 CLASP1Q7Z460 1538 aa15.05■□□□□ -0
NSMCE1-206ENST00000563900 TRIM41Q8WV44 630 aa15.04■□□□□ -0
NSMCE1-206ENST00000563900 FBLN2P98095 1184 aa15.03■□□□□ -0
NSMCE1-206ENST00000563900 NUP160Q12769 1436 aa15.01□□□□□ -0.01
NSMCE1-206ENST00000563900 CUL7Q14999 1698 aa15.01□□□□□ -0.01
NSMCE1-206ENST00000563900 RUSC2Q8N2Y8 1516 aa15.01□□□□□ -0.01
NSMCE1-206ENST00000563900 CEP170Q5SW79 1584 aa14.98□□□□□ -0.01
NSMCE1-206ENST00000563900 ARHGEF11O15085 1522 aa14.95□□□□□ -0.02
NSMCE1-206ENST00000563900 CARMIL1Q5VZK9 1371 aa14.95□□□□□ -0.02
NSMCE1-206ENST00000563900 RIMBP3CA6NJZ7 1639 aa14.93□□□□□ -0.02
NSMCE1-206ENST00000563900 RIMBP3BA6NNM3 1639 aa14.93□□□□□ -0.02
NSMCE1-206ENST00000563900 RIMBP3Q9UFD9 1639 aa14.93□□□□□ -0.02
NSMCE1-206ENST00000563900 SHROOM2Q13796 1616 aa14.9□□□□□ -0.02
NSMCE1-206ENST00000563900 PRXQ9BXM0 1461 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms