RNA–Protein interactions for RNA: ENST00000563875.1

SNUPN-203, Transcript of snurportin 1, humanhuman

TSL 3

Gene SNUPN, Length 406 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-203ENST00000563875 NISCHQ9Y2I1 1504 aa27.88■■■□□ 2.05
SNUPN-203ENST00000563875 CCDC180Q9P1Z9 1646 aa24.89■■□□□ 1.57
SNUPN-203ENST00000563875 ABCC9O60706 1549 aa24.39■■□□□ 1.49
SNUPN-203ENST00000563875 RB1CC1Q8TDY2 1594 aa23.43■■□□□ 1.34
SNUPN-203ENST00000563875 NACADO15069 1562 aa23.38■■□□□ 1.33
SNUPN-203ENST00000563875 ZCCHC6Q5VYS8 1495 aaKnown RBP23.23■■□□□ 1.31
SNUPN-203ENST00000563875 MYO15BQ96JP2 1530 aa23.23■■□□□ 1.31
SNUPN-203ENST00000563875 DCAF8L2P0C7V8 631 aa23.17■■□□□ 1.3
SNUPN-203ENST00000563875 DCAF1Q9Y4B6 1507 aa23.08■■□□□ 1.29
SNUPN-203ENST00000563875 UNC13AQ9UPW8 1703 aa22.99■■□□□ 1.27
SNUPN-203ENST00000563875 BICRAQ9NZM4 1560 aa22.79■■□□□ 1.24
SNUPN-203ENST00000563875 PABPN1Q86U42 306 aaKnown RBP eCLIP22.72■■□□□ 1.23
SNUPN-203ENST00000563875 SCRIBQ14160 1630 aa22.66■■□□□ 1.22
SNUPN-203ENST00000563875 SHROOM4Q9ULL8 1493 aa22.51■■□□□ 1.19
SNUPN-203ENST00000563875 DNAJC5BQ9UF47 199 aa22.5■■□□□ 1.19
SNUPN-203ENST00000563875 EIF4G1Q04637 1599 aaKnown RBP22.16■■□□□ 1.14
SNUPN-203ENST00000563875 CC2D2AQ9P2K1 1620 aa22.09■■□□□ 1.13
SNUPN-203ENST00000563875 CECR2Q9BXF3 1484 aa21.93■■□□□ 1.1
SNUPN-203ENST00000563875 SMARCA4P51532 1647 aa21.68■■□□□ 1.06
SNUPN-203ENST00000563875 BAZ1AQ9NRL2 1556 aaPredicted RBP21.61■■□□□ 1.05
SNUPN-203ENST00000563875 NCAPD3P42695 1498 aa21.57■■□□□ 1.04
SNUPN-203ENST00000563875 ATAD2BQ9ULI0 1458 aa21.57■■□□□ 1.04
SNUPN-203ENST00000563875 SMARCA2P51531 1590 aa21.53■■□□□ 1.04
SNUPN-203ENST00000563875 MROH2BQ7Z745 1585 aa21.49■■□□□ 1.03
SNUPN-203ENST00000563875 PEG3Q9GZU2 1588 aa21.49■■□□□ 1.03
SNUPN-203ENST00000563875 HMGXB3Q12766 1538 aa21.49■■□□□ 1.03
SNUPN-203ENST00000563875 BAZ1BQ9UIG0 1483 aaKnown RBP21.37■■□□□ 1.01
SNUPN-203ENST00000563875 WIZO95785 1651 aa21.26■□□□□ 0.99
SNUPN-203ENST00000563875 RSF1Q96T23 1441 aaPredicted RBP21.18■□□□□ 0.98
SNUPN-203ENST00000563875 NESP48681 1621 aa21.1■□□□□ 0.97
SNUPN-203ENST00000563875 LAMC3Q9Y6N6 1575 aa21.04■□□□□ 0.96
SNUPN-203ENST00000563875 TOP2AP11388 1531 aaKnown RBP21.02■□□□□ 0.96
SNUPN-203ENST00000563875 ERCC6Q03468 1493 aa21.01■□□□□ 0.95
SNUPN-203ENST00000563875 CADPSQ9ULU8 1353 aa20.9■□□□□ 0.94
SNUPN-203ENST00000563875 KIF21AQ7Z4S6 1674 aa20.89■□□□□ 0.93
SNUPN-203ENST00000563875 CUX2O14529 1486 aa20.88■□□□□ 0.93
SNUPN-203ENST00000563875 THOC2Q8NI27 1593 aaKnown RBP20.86■□□□□ 0.93
SNUPN-203ENST00000563875 PDS5BQ9NTI5 1447 aa20.84■□□□□ 0.93
SNUPN-203ENST00000563875 CFTRP13569 1480 aa20.8■□□□□ 0.92
SNUPN-203ENST00000563875 CCDC88BA6NC98 1476 aa20.75■□□□□ 0.91
SNUPN-203ENST00000563875 PRDM2Q13029 1718 aa20.7■□□□□ 0.9
SNUPN-203ENST00000563875 FANCD2Q9BXW9 1451 aa20.69■□□□□ 0.9
SNUPN-203ENST00000563875 MRC2Q9UBG0 1479 aa20.68■□□□□ 0.9
SNUPN-203ENST00000563875 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
SNUPN-203ENST00000563875 WDR62O43379 1518 aa20.64■□□□□ 0.9
SNUPN-203ENST00000563875 URB2Q14146 1524 aaKnown RBP20.52■□□□□ 0.87
SNUPN-203ENST00000563875 SUPT5HO00267 1087 aaKnown RBP20.44■□□□□ 0.86
SNUPN-203ENST00000563875 TOPBP1Q92547 1522 aa20.35■□□□□ 0.85
SNUPN-203ENST00000563875 DNMBPQ6XZF7 1577 aa20.34■□□□□ 0.85
SNUPN-203ENST00000563875 DNAJC5Q9H3Z4 198 aa20.33■□□□□ 0.85
SNUPN-203ENST00000563875 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
SNUPN-203ENST00000563875 IFT140Q96RY7 1462 aa20.24■□□□□ 0.83
SNUPN-203ENST00000563875 TARBP1Q13395 1621 aaKnown RBP20.19■□□□□ 0.82
SNUPN-203ENST00000563875 CUX1P39880 1505 aa20.18■□□□□ 0.82
SNUPN-203ENST00000563875 ZNF608Q9ULD9 1512 aaPredicted RBP20.18■□□□□ 0.82
SNUPN-203ENST00000563875 POLA1P09884 1462 aaPredicted RBP20.18■□□□□ 0.82
SNUPN-203ENST00000563875 EIF4G3O43432 1585 aaKnown RBP20.12■□□□□ 0.81
SNUPN-203ENST00000563875 FGD5Q6ZNL6 1462 aa20.1■□□□□ 0.81
SNUPN-203ENST00000563875 RAD54L2Q9Y4B4 1467 aa20.07■□□□□ 0.8
SNUPN-203ENST00000563875 SOGA1O94964 1423 aa20.03■□□□□ 0.8
SNUPN-203ENST00000563875 WDR97A6NE52 1622 aa20.02■□□□□ 0.8
SNUPN-203ENST00000563875 AQRO60306 1485 aaKnown RBP eCLIP20.02■□□□□ 0.8
SNUPN-203ENST00000563875 BIVM-ERCC5R4GMW8 1640 aa19.99■□□□□ 0.79
SNUPN-203ENST00000563875 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
SNUPN-203ENST00000563875 TOP2BQ02880 1626 aa19.97■□□□□ 0.79
SNUPN-203ENST00000563875 WRNQ14191 1432 aaPredicted RBP eCLIP19.95■□□□□ 0.78
SNUPN-203ENST00000563875 TDRD9Q8NDG6 1382 aaKnown RBP19.95■□□□□ 0.78
SNUPN-203ENST00000563875 ABCA10Q8WWZ4 1543 aa19.92■□□□□ 0.78
SNUPN-203ENST00000563875 OSCARQ8IYS5 282 aa19.9■□□□□ 0.78
SNUPN-203ENST00000563875 CHD1O14646 1710 aa19.9■□□□□ 0.78
SNUPN-203ENST00000563875 ABCA5Q8WWZ7 1642 aa19.88■□□□□ 0.77
SNUPN-203ENST00000563875 PBRM1Q86U86 1689 aa19.86■□□□□ 0.77
SNUPN-203ENST00000563875 SNAPC4Q5SXM2 1469 aa19.86■□□□□ 0.77
SNUPN-203ENST00000563875 GRIN2BQ13224 1484 aa19.85■□□□□ 0.77
SNUPN-203ENST00000563875 GAPVD1Q14C86 1478 aa19.83■□□□□ 0.76
SNUPN-203ENST00000563875 MAGI1Q96QZ7 1491 aaPredicted RBP19.82■□□□□ 0.76
SNUPN-203ENST00000563875 SYNJ2O15056 1496 aa19.74■□□□□ 0.75
SNUPN-203ENST00000563875 FBLN2P98095 1184 aa19.71■□□□□ 0.75
SNUPN-203ENST00000563875 RIMBP3CA6NJZ7 1639 aa19.7■□□□□ 0.74
SNUPN-203ENST00000563875 RIMBP3BA6NNM3 1639 aa19.7■□□□□ 0.74
SNUPN-203ENST00000563875 RIMBP3Q9UFD9 1639 aa19.7■□□□□ 0.74
SNUPN-203ENST00000563875 ADAMTS12P58397 1594 aa19.69■□□□□ 0.74
SNUPN-203ENST00000563875 CLASP1Q7Z460 1538 aa19.68■□□□□ 0.74
SNUPN-203ENST00000563875 ARHGEF11O15085 1522 aa19.67■□□□□ 0.74
SNUPN-203ENST00000563875 ERICH3Q5RHP9 1530 aa19.67■□□□□ 0.74
SNUPN-203ENST00000563875 CHMP7Q8WUX9 453 aaPredicted RBP19.66■□□□□ 0.74
SNUPN-203ENST00000563875 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
SNUPN-203ENST00000563875 FHAD1B1AJZ9 1412 aa19.59■□□□□ 0.73
SNUPN-203ENST00000563875 TRIM41Q8WV44 630 aa19.56■□□□□ 0.72
SNUPN-203ENST00000563875 CEP170Q5SW79 1584 aa19.55■□□□□ 0.72
SNUPN-203ENST00000563875 NUP160Q12769 1436 aa19.54■□□□□ 0.72
SNUPN-203ENST00000563875 ARAP1Q96P48 1450 aa19.53■□□□□ 0.72
SNUPN-203ENST00000563875 KIF27Q86VH2 1401 aa19.52■□□□□ 0.72
SNUPN-203ENST00000563875 CUL7Q14999 1698 aa19.48■□□□□ 0.71
SNUPN-203ENST00000563875 IGF1RP08069 1367 aa19.47■□□□□ 0.71
SNUPN-203ENST00000563875 SHROOM2Q13796 1616 aa19.44■□□□□ 0.7
SNUPN-203ENST00000563875 RUSC2Q8N2Y8 1516 aa19.41■□□□□ 0.7
SNUPN-203ENST00000563875 CYB5RLQ6IPT4 315 aa19.4■□□□□ 0.7
SNUPN-203ENST00000563875 ERCC6L2Q5T890 1561 aa19.4■□□□□ 0.7
SNUPN-203ENST00000563875 CARMIL1Q5VZK9 1371 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms