RNA–Protein interactions for RNA: ENST00000563858.5

NUP93-208, Transcript of nucleoporin 93, humanhuman

TSL 5

Gene NUP93, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP93-208ENST00000563858 NISCHQ9Y2I1 1504 aa40.62■■■■■ 4.09
NUP93-208ENST00000563858 ABCC9O60706 1549 aa36.75■■■■□ 3.47
NUP93-208ENST00000563858 CCDC180Q9P1Z9 1646 aa36.4■■■■□ 3.42
NUP93-208ENST00000563858 DNAJC5BQ9UF47 199 aa34.78■■■■□ 3.16
NUP93-208ENST00000563858 RB1CC1Q8TDY2 1594 aa34.74■■■■□ 3.15
NUP93-208ENST00000563858 NACADO15069 1562 aa34.47■■■■□ 3.11
NUP93-208ENST00000563858 DCAF8L2P0C7V8 631 aa34.45■■■■□ 3.11
NUP93-208ENST00000563858 PABPN1Q86U42 306 aaKnown RBP eCLIP34.26■■■■□ 3.08
NUP93-208ENST00000563858 UNC13AQ9UPW8 1703 aa34.1■■■■□ 3.05
NUP93-208ENST00000563858 BICRAQ9NZM4 1560 aa33.9■■■■□ 3.02
NUP93-208ENST00000563858 MYO15BQ96JP2 1530 aa33.9■■■■□ 3.02
NUP93-208ENST00000563858 ZCCHC6Q5VYS8 1495 aaKnown RBP33.62■■■□□ 2.97
NUP93-208ENST00000563858 DCAF1Q9Y4B6 1507 aa33.44■■■□□ 2.94
NUP93-208ENST00000563858 SCRIBQ14160 1630 aa33.29■■■□□ 2.92
NUP93-208ENST00000563858 SHROOM4Q9ULL8 1493 aa33.16■■■□□ 2.9
NUP93-208ENST00000563858 CC2D2AQ9P2K1 1620 aa33.14■■■□□ 2.9
NUP93-208ENST00000563858 CECR2Q9BXF3 1484 aa33.05■■■□□ 2.88
NUP93-208ENST00000563858 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.88
NUP93-208ENST00000563858 NCAPD3P42695 1498 aa31.9■■■□□ 2.7
NUP93-208ENST00000563858 DNAJC5Q9H3Z4 198 aa31.88■■■□□ 2.69
NUP93-208ENST00000563858 ATAD2BQ9ULI0 1458 aa31.81■■■□□ 2.68
NUP93-208ENST00000563858 SMARCA4P51532 1647 aa31.71■■■□□ 2.67
NUP93-208ENST00000563858 ERCC6Q03468 1493 aa31.61■■■□□ 2.65
NUP93-208ENST00000563858 SMARCA2P51531 1590 aa31.6■■■□□ 2.65
NUP93-208ENST00000563858 HMGXB3Q12766 1538 aa31.58■■■□□ 2.65
NUP93-208ENST00000563858 CUX2O14529 1486 aa31.58■■■□□ 2.65
NUP93-208ENST00000563858 NESP48681 1621 aa31.57■■■□□ 2.64
NUP93-208ENST00000563858 BAZ1AQ9NRL2 1556 aaPredicted RBP31.47■■■□□ 2.63
NUP93-208ENST00000563858 BAZ1BQ9UIG0 1483 aaKnown RBP31.43■■■□□ 2.62
NUP93-208ENST00000563858 MROH2BQ7Z745 1585 aa31.37■■■□□ 2.61
NUP93-208ENST00000563858 PEG3Q9GZU2 1588 aa31.36■■■□□ 2.61
NUP93-208ENST00000563858 THOC2Q8NI27 1593 aaKnown RBP31.17■■■□□ 2.58
NUP93-208ENST00000563858 LAMC3Q9Y6N6 1575 aa31.13■■■□□ 2.57
NUP93-208ENST00000563858 KIF21AQ7Z4S6 1674 aa31.08■■■□□ 2.57
NUP93-208ENST00000563858 WIZO95785 1651 aa30.99■■■□□ 2.55
NUP93-208ENST00000563858 PDS5BQ9NTI5 1447 aa30.96■■■□□ 2.55
NUP93-208ENST00000563858 CADPSQ9ULU8 1353 aa30.92■■■□□ 2.54
NUP93-208ENST00000563858 MRC2Q9UBG0 1479 aa30.74■■■□□ 2.51
NUP93-208ENST00000563858 WDR62O43379 1518 aa30.68■■■□□ 2.5
NUP93-208ENST00000563858 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
NUP93-208ENST00000563858 FANCD2Q9BXW9 1451 aa30.57■■■□□ 2.48
NUP93-208ENST00000563858 CEP164Q9UPV0 1460 aa30.57■■■□□ 2.48
NUP93-208ENST00000563858 CFTRP13569 1480 aa30.54■■■□□ 2.48
NUP93-208ENST00000563858 TOP2AP11388 1531 aaKnown RBP30.47■■■□□ 2.47
NUP93-208ENST00000563858 TRIM41Q8WV44 630 aa30.46■■■□□ 2.47
NUP93-208ENST00000563858 URB2Q14146 1524 aaKnown RBP30.39■■■□□ 2.46
NUP93-208ENST00000563858 CCDC88BA6NC98 1476 aa30.22■■■□□ 2.43
NUP93-208ENST00000563858 OSCARQ8IYS5 282 aa30.19■■■□□ 2.42
NUP93-208ENST00000563858 PRDM2Q13029 1718 aa30.14■■■□□ 2.42
NUP93-208ENST00000563858 ZNF608Q9ULD9 1512 aaPredicted RBP30.07■■■□□ 2.4
NUP93-208ENST00000563858 TOPBP1Q92547 1522 aa29.99■■■□□ 2.39
NUP93-208ENST00000563858 IFT140Q96RY7 1462 aa29.96■■■□□ 2.39
NUP93-208ENST00000563858 RIMBP3CA6NJZ7 1639 aa29.84■■■□□ 2.37
NUP93-208ENST00000563858 RIMBP3BA6NNM3 1639 aa29.84■■■□□ 2.37
NUP93-208ENST00000563858 RIMBP3Q9UFD9 1639 aa29.84■■■□□ 2.37
NUP93-208ENST00000563858 DNMBPQ6XZF7 1577 aa29.81■■■□□ 2.36
NUP93-208ENST00000563858 EIF4G3O43432 1585 aaKnown RBP29.8■■■□□ 2.36
NUP93-208ENST00000563858 AQRO60306 1485 aaKnown RBP eCLIP29.78■■■□□ 2.36
NUP93-208ENST00000563858 ABCC8Q09428 1581 aa29.77■■■□□ 2.36
NUP93-208ENST00000563858 TARBP1Q13395 1621 aaKnown RBP29.75■■■□□ 2.35
NUP93-208ENST00000563858 ARHGEF11O15085 1522 aa29.71■■■□□ 2.35
NUP93-208ENST00000563858 POLA1P09884 1462 aaPredicted RBP29.68■■■□□ 2.34
NUP93-208ENST00000563858 RAD54L2Q9Y4B4 1467 aa29.66■■■□□ 2.34
NUP93-208ENST00000563858 CHD1O14646 1710 aa29.64■■■□□ 2.34
NUP93-208ENST00000563858 FBLN2P98095 1184 aa29.57■■■□□ 2.32
NUP93-208ENST00000563858 CYB5RLQ6IPT4 315 aa29.57■■■□□ 2.32
NUP93-208ENST00000563858 TDRD9Q8NDG6 1382 aaKnown RBP29.56■■■□□ 2.32
NUP93-208ENST00000563858 SOGA1O94964 1423 aa29.54■■■□□ 2.32
NUP93-208ENST00000563858 FGD5Q6ZNL6 1462 aa29.48■■■□□ 2.31
NUP93-208ENST00000563858 CUX1P39880 1505 aa29.46■■■□□ 2.31
NUP93-208ENST00000563858 ARAP1Q96P48 1450 aa29.45■■■□□ 2.31
NUP93-208ENST00000563858 SNAPC4Q5SXM2 1469 aa29.4■■■□□ 2.3
NUP93-208ENST00000563858 CHMP7Q8WUX9 453 aaPredicted RBP29.28■■■□□ 2.28
NUP93-208ENST00000563858 CLASP1Q7Z460 1538 aa29.28■■■□□ 2.28
NUP93-208ENST00000563858 WDR97A6NE52 1622 aa29.25■■■□□ 2.27
NUP93-208ENST00000563858 GRIN2BQ13224 1484 aa29.24■■■□□ 2.27
NUP93-208ENST00000563858 TRHP20396 242 aaPredicted RBP29.24■■■□□ 2.27
NUP93-208ENST00000563858 MAGI1Q96QZ7 1491 aaPredicted RBP29.23■■■□□ 2.27
NUP93-208ENST00000563858 SUPT5HO00267 1087 aaKnown RBP29.22■■■□□ 2.27
NUP93-208ENST00000563858 SYNJ2O15056 1496 aa29.17■■■□□ 2.26
NUP93-208ENST00000563858 SYNJ1O43426 1573 aa29.16■■■□□ 2.26
NUP93-208ENST00000563858 GAPVD1Q14C86 1478 aa29.16■■■□□ 2.26
NUP93-208ENST00000563858 PBRM1Q86U86 1689 aa29.14■■■□□ 2.26
NUP93-208ENST00000563858 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
NUP93-208ENST00000563858 ABCA5Q8WWZ7 1642 aa29.08■■■□□ 2.25
NUP93-208ENST00000563858 ERCC6L2Q5T890 1561 aa28.94■■■□□ 2.22
NUP93-208ENST00000563858 WRNQ14191 1432 aaPredicted RBP eCLIP28.91■■■□□ 2.22
NUP93-208ENST00000563858 GRIN2AQ12879 1464 aa28.91■■■□□ 2.22
NUP93-208ENST00000563858 TOP2BQ02880 1626 aa28.87■■■□□ 2.21
NUP93-208ENST00000563858 BIVM-ERCC5R4GMW8 1640 aa28.87■■■□□ 2.21
NUP93-208ENST00000563858 ADAMTS12P58397 1594 aa28.86■■■□□ 2.21
NUP93-208ENST00000563858 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
NUP93-208ENST00000563858 NUP160Q12769 1436 aa28.82■■■□□ 2.2
NUP93-208ENST00000563858 FHAD1B1AJZ9 1412 aa28.75■■■□□ 2.19
NUP93-208ENST00000563858 SHROOM2Q13796 1616 aa28.69■■■□□ 2.18
NUP93-208ENST00000563858 ERICH3Q5RHP9 1530 aa28.69■■■□□ 2.18
NUP93-208ENST00000563858 PRG4Q92954 1404 aaPredicted RBP28.57■■■□□ 2.16
NUP93-208ENST00000563858 JPH4Q96JJ6 628 aa28.56■■■□□ 2.16
NUP93-208ENST00000563858 RUSC2Q8N2Y8 1516 aa28.45■■■□□ 2.15
NUP93-208ENST00000563858 KIF13AQ9H1H9 1805 aa28.44■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms