RNA–Protein interactions for RNA: ENST00000563732.5

PPP4C-207, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 2

Gene PPP4C, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-207ENST00000563732 NISCHQ9Y2I1 1504 aa50.7■■■■■ 5.71
PPP4C-207ENST00000563732 CCDC180Q9P1Z9 1646 aa44.86■■■■■ 4.77
PPP4C-207ENST00000563732 ABCC9O60706 1549 aa43.47■■■■■ 4.55
PPP4C-207ENST00000563732 ZCCHC6Q5VYS8 1495 aaKnown RBP42.36■■■■■ 4.37
PPP4C-207ENST00000563732 NACADO15069 1562 aa42.02■■■■■ 4.32
PPP4C-207ENST00000563732 MYO15BQ96JP2 1530 aa41.97■■■■■ 4.31
PPP4C-207ENST00000563732 DCAF1Q9Y4B6 1507 aa41.97■■■■■ 4.31
PPP4C-207ENST00000563732 RB1CC1Q8TDY2 1594 aa41.93■■■■■ 4.3
PPP4C-207ENST00000563732 DCAF8L2P0C7V8 631 aa41.84■■■■■ 4.29
PPP4C-207ENST00000563732 UNC13AQ9UPW8 1703 aa41.23■■■■■ 4.19
PPP4C-207ENST00000563732 SCRIBQ14160 1630 aa40.97■■■■■ 4.15
PPP4C-207ENST00000563732 BICRAQ9NZM4 1560 aa40.91■■■■■ 4.14
PPP4C-207ENST00000563732 PABPN1Q86U42 306 aaKnown RBP eCLIP40.65■■■■■ 4.1
PPP4C-207ENST00000563732 SHROOM4Q9ULL8 1493 aa40.27■■■■■ 4.04
PPP4C-207ENST00000563732 DNAJC5BQ9UF47 199 aa39.69■■■■□ 3.94
PPP4C-207ENST00000563732 EIF4G1Q04637 1599 aaKnown RBP39.65■■■■□ 3.94
PPP4C-207ENST00000563732 CECR2Q9BXF3 1484 aa39.53■■■■□ 3.92
PPP4C-207ENST00000563732 CC2D2AQ9P2K1 1620 aa39.39■■■■□ 3.9
PPP4C-207ENST00000563732 SMARCA4P51532 1647 aa39.26■■■■□ 3.88
PPP4C-207ENST00000563732 BAZ1AQ9NRL2 1556 aaPredicted RBP39.17■■■■□ 3.86
PPP4C-207ENST00000563732 MROH2BQ7Z745 1585 aa39.14■■■■□ 3.86
PPP4C-207ENST00000563732 ATAD2BQ9ULI0 1458 aa38.93■■■■□ 3.82
PPP4C-207ENST00000563732 PEG3Q9GZU2 1588 aa38.92■■■■□ 3.82
PPP4C-207ENST00000563732 NCAPD3P42695 1498 aa38.83■■■■□ 3.81
PPP4C-207ENST00000563732 RSF1Q96T23 1441 aaPredicted RBP38.8■■■■□ 3.8
PPP4C-207ENST00000563732 SMARCA2P51531 1590 aa38.79■■■■□ 3.8
PPP4C-207ENST00000563732 WIZO95785 1651 aa38.72■■■■□ 3.79
PPP4C-207ENST00000563732 HMGXB3Q12766 1538 aa38.68■■■■□ 3.78
PPP4C-207ENST00000563732 BAZ1BQ9UIG0 1483 aaKnown RBP38.52■■■■□ 3.76
PPP4C-207ENST00000563732 TOP2AP11388 1531 aaKnown RBP38.28■■■■□ 3.72
PPP4C-207ENST00000563732 SUPT5HO00267 1087 aaKnown RBP37.89■■■■□ 3.66
PPP4C-207ENST00000563732 CCDC88BA6NC98 1476 aa37.84■■■■□ 3.65
PPP4C-207ENST00000563732 NESP48681 1621 aa37.84■■■■□ 3.65
PPP4C-207ENST00000563732 LAMC3Q9Y6N6 1575 aa37.68■■■■□ 3.62
PPP4C-207ENST00000563732 CADPSQ9ULU8 1353 aa37.66■■■■□ 3.62
PPP4C-207ENST00000563732 CFTRP13569 1480 aa37.59■■■■□ 3.61
PPP4C-207ENST00000563732 KIF21AQ7Z4S6 1674 aa37.39■■■■□ 3.58
PPP4C-207ENST00000563732 PRDM2Q13029 1718 aa37.35■■■■□ 3.57
PPP4C-207ENST00000563732 PDS5BQ9NTI5 1447 aa37.3■■■■□ 3.56
PPP4C-207ENST00000563732 ERCC6Q03468 1493 aa37.26■■■■□ 3.55
PPP4C-207ENST00000563732 FANCD2Q9BXW9 1451 aa37.24■■■■□ 3.55
PPP4C-207ENST00000563732 THOC2Q8NI27 1593 aaKnown RBP37.21■■■■□ 3.55
PPP4C-207ENST00000563732 CEP164Q9UPV0 1460 aa37.1■■■■□ 3.53
PPP4C-207ENST00000563732 MRC2Q9UBG0 1479 aa37.01■■■■□ 3.51
PPP4C-207ENST00000563732 URB2Q14146 1524 aaKnown RBP36.95■■■■□ 3.51
PPP4C-207ENST00000563732 WDR62O43379 1518 aa36.95■■■■□ 3.5
PPP4C-207ENST00000563732 CUX2O14529 1486 aa36.83■■■■□ 3.49
PPP4C-207ENST00000563732 TOPBP1Q92547 1522 aa36.75■■■■□ 3.47
PPP4C-207ENST00000563732 DNMBPQ6XZF7 1577 aa36.7■■■■□ 3.47
PPP4C-207ENST00000563732 CUX1P39880 1505 aa36.69■■■■□ 3.46
PPP4C-207ENST00000563732 ABCC8Q09428 1581 aa36.61■■■■□ 3.45
PPP4C-207ENST00000563732 SYNJ1O43426 1573 aa36.51■■■■□ 3.44
PPP4C-207ENST00000563732 POLA1P09884 1462 aaPredicted RBP36.47■■■■□ 3.43
PPP4C-207ENST00000563732 WRNQ14191 1432 aaPredicted RBP eCLIP36.45■■■■□ 3.43
PPP4C-207ENST00000563732 BIVM-ERCC5R4GMW8 1640 aa36.45■■■■□ 3.42
PPP4C-207ENST00000563732 TOP2BQ02880 1626 aa36.42■■■■□ 3.42
PPP4C-207ENST00000563732 FGD5Q6ZNL6 1462 aa36.41■■■■□ 3.42
PPP4C-207ENST00000563732 TARBP1Q13395 1621 aaKnown RBP36.39■■■■□ 3.42
PPP4C-207ENST00000563732 IFT140Q96RY7 1462 aa36.31■■■■□ 3.4
PPP4C-207ENST00000563732 RAD54L2Q9Y4B4 1467 aa36.31■■■■□ 3.4
PPP4C-207ENST00000563732 ZNF608Q9ULD9 1512 aaPredicted RBP36.26■■■■□ 3.4
PPP4C-207ENST00000563732 WDR97A6NE52 1622 aa36.23■■■■□ 3.39
PPP4C-207ENST00000563732 SOGA1O94964 1423 aa36.21■■■■□ 3.39
PPP4C-207ENST00000563732 EIF4G3O43432 1585 aaKnown RBP36.1■■■■□ 3.37
PPP4C-207ENST00000563732 ABCA10Q8WWZ4 1543 aa36.09■■■■□ 3.37
PPP4C-207ENST00000563732 AQRO60306 1485 aaKnown RBP eCLIP36.04■■■■□ 3.366e-7■■■■□ 24.5
PPP4C-207ENST00000563732 TDRD9Q8NDG6 1382 aaKnown RBP36■■■■□ 3.35
PPP4C-207ENST00000563732 ABCA5Q8WWZ7 1642 aa35.97■■■■□ 3.35
PPP4C-207ENST00000563732 GAPVD1Q14C86 1478 aa35.82■■■■□ 3.32
PPP4C-207ENST00000563732 PBRM1Q86U86 1689 aa35.81■■■■□ 3.32
PPP4C-207ENST00000563732 CHIC1Q5VXU3 224 aa35.76■■■■□ 3.32
PPP4C-207ENST00000563732 GRIN2BQ13224 1484 aa35.74■■■■□ 3.31
PPP4C-207ENST00000563732 SNAPC4Q5SXM2 1469 aa35.71■■■■□ 3.31
PPP4C-207ENST00000563732 TRIM41Q8WV44 630 aa35.7■■■■□ 3.31
PPP4C-207ENST00000563732 RUSC2Q8N2Y8 1516 aa35.65■■■■□ 3.3
PPP4C-207ENST00000563732 ERICH3Q5RHP9 1530 aa35.62■■■■□ 3.29
PPP4C-207ENST00000563732 MAGI1Q96QZ7 1491 aaPredicted RBP35.62■■■■□ 3.29
PPP4C-207ENST00000563732 KIF27Q86VH2 1401 aa35.58■■■■□ 3.29
PPP4C-207ENST00000563732 ADAMTS12P58397 1594 aa35.57■■■■□ 3.28
PPP4C-207ENST00000563732 CHD1O14646 1710 aa35.57■■■■□ 3.28
PPP4C-207ENST00000563732 IGF1RP08069 1367 aa35.53■■■■□ 3.28
PPP4C-207ENST00000563732 SYNJ2O15056 1496 aa35.49■■■■□ 3.27
PPP4C-207ENST00000563732 FHAD1B1AJZ9 1412 aa35.41■■■■□ 3.26
PPP4C-207ENST00000563732 CUL7Q14999 1698 aa35.35■■■■□ 3.25
PPP4C-207ENST00000563732 GRIN2AQ12879 1464 aa35.35■■■■□ 3.25
PPP4C-207ENST00000563732 FBLN2P98095 1184 aa35.26■■■■□ 3.24
PPP4C-207ENST00000563732 CHMP7Q8WUX9 453 aaPredicted RBP35.26■■■■□ 3.24
PPP4C-207ENST00000563732 CEP170Q5SW79 1584 aa35.25■■■■□ 3.23
PPP4C-207ENST00000563732 OSCARQ8IYS5 282 aa35.25■■■■□ 3.23
PPP4C-207ENST00000563732 CLASP1Q7Z460 1538 aa35.25■■■■□ 3.23
PPP4C-207ENST00000563732 CARMIL1Q5VZK9 1371 aa35.24■■■■□ 3.23
PPP4C-207ENST00000563732 NUP160Q12769 1436 aa35.23■■■■□ 3.23
PPP4C-207ENST00000563732 DNAJC5Q9H3Z4 198 aa35.22■■■■□ 3.23
PPP4C-207ENST00000563732 PRXQ9BXM0 1461 aa35.19■■■■□ 3.22
PPP4C-207ENST00000563732 EEA1Q15075 1411 aa35.16■■■■□ 3.22
PPP4C-207ENST00000563732 RAPGEF2Q9Y4G8 1499 aa35.08■■■■□ 3.21
PPP4C-207ENST00000563732 CSRNP3Q8WYN3 585 aa35.07■■■■□ 3.2
PPP4C-207ENST00000563732 FAM9AQ8IZU1 332 aaPredicted RBP35.01■■■■□ 3.2
PPP4C-207ENST00000563732 SHROOM2Q13796 1616 aa34.96■■■■□ 3.19
PPP4C-207ENST00000563732 KIF21BO75037 1637 aa34.92■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms