RNA–Protein interactions for RNA: ENST00000563674.1

SH2B1-209, Transcript of SH2B adaptor protein 1, humanhuman

TSL 3

Gene SH2B1, Length 719 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2B1-209ENST00000563674 NISCHQ9Y2I1 1504 aa56.42■■■■■ 6.62
SH2B1-209ENST00000563674 CCDC180Q9P1Z9 1646 aa50.36■■■■■ 5.65
SH2B1-209ENST00000563674 ABCC9O60706 1549 aa49.96■■■■■ 5.59
SH2B1-209ENST00000563674 RB1CC1Q8TDY2 1594 aa47.79■■■■■ 5.24
SH2B1-209ENST00000563674 DCAF8L2P0C7V8 631 aa47.59■■■■■ 5.21
SH2B1-209ENST00000563674 NACADO15069 1562 aa47.58■■■■■ 5.21
SH2B1-209ENST00000563674 MYO15BQ96JP2 1530 aa47.09■■■■■ 5.13
SH2B1-209ENST00000563674 ZCCHC6Q5VYS8 1495 aaKnown RBP46.84■■■■■ 5.09
SH2B1-209ENST00000563674 DCAF1Q9Y4B6 1507 aa46.65■■■■■ 5.06
SH2B1-209ENST00000563674 PABPN1Q86U42 306 aaKnown RBP eCLIP46.64■■■■■ 5.064e-6■□□□□ 10.2
SH2B1-209ENST00000563674 UNC13AQ9UPW8 1703 aa46.48■■■■■ 5.03
SH2B1-209ENST00000563674 DNAJC5BQ9UF47 199 aa46.38■■■■■ 5.02
SH2B1-209ENST00000563674 BICRAQ9NZM4 1560 aa46.24■■■■■ 4.99
SH2B1-209ENST00000563674 SCRIBQ14160 1630 aa45.93■■■■■ 4.94
SH2B1-209ENST00000563674 SHROOM4Q9ULL8 1493 aa45.85■■■■■ 4.93
SH2B1-209ENST00000563674 EIF4G1Q04637 1599 aaKnown RBP45.15■■■■■ 4.82
SH2B1-209ENST00000563674 CC2D2AQ9P2K1 1620 aa45.11■■■■■ 4.81
SH2B1-209ENST00000563674 CECR2Q9BXF3 1484 aa44.99■■■■■ 4.79
SH2B1-209ENST00000563674 NCAPD3P42695 1498 aa43.93■■■■■ 4.62
SH2B1-209ENST00000563674 SMARCA4P51532 1647 aa43.87■■■■■ 4.61
SH2B1-209ENST00000563674 ATAD2BQ9ULI0 1458 aa43.84■■■■■ 4.61
SH2B1-209ENST00000563674 BAZ1AQ9NRL2 1556 aaPredicted RBP43.8■■■■■ 4.6
SH2B1-209ENST00000563674 SMARCA2P51531 1590 aa43.79■■■■■ 4.6
SH2B1-209ENST00000563674 HMGXB3Q12766 1538 aa43.62■■■■■ 4.57
SH2B1-209ENST00000563674 BAZ1BQ9UIG0 1483 aaKnown RBP43.48■■■■■ 4.55
SH2B1-209ENST00000563674 PEG3Q9GZU2 1588 aa43.44■■■■■ 4.54
SH2B1-209ENST00000563674 MROH2BQ7Z745 1585 aa43.43■■■■■ 4.54
SH2B1-209ENST00000563674 ERCC6Q03468 1493 aa43.19■■■■■ 4.51
SH2B1-209ENST00000563674 NESP48681 1621 aa43■■■■■ 4.47
SH2B1-209ENST00000563674 CUX2O14529 1486 aa42.92■■■■■ 4.46
SH2B1-209ENST00000563674 WIZO95785 1651 aa42.9■■■■■ 4.46
SH2B1-209ENST00000563674 LAMC3Q9Y6N6 1575 aa42.85■■■■■ 4.45
SH2B1-209ENST00000563674 RSF1Q96T23 1441 aaPredicted RBP42.76■■■■■ 4.44
SH2B1-209ENST00000563674 PDS5BQ9NTI5 1447 aa42.69■■■■■ 4.42
SH2B1-209ENST00000563674 CADPSQ9ULU8 1353 aa42.66■■■■■ 4.42
SH2B1-209ENST00000563674 TOP2AP11388 1531 aaKnown RBP42.47■■■■■ 4.39
SH2B1-209ENST00000563674 THOC2Q8NI27 1593 aaKnown RBP42.43■■■■■ 4.38
SH2B1-209ENST00000563674 KIF21AQ7Z4S6 1674 aa42.4■■■■■ 4.38
SH2B1-209ENST00000563674 DNAJC5Q9H3Z4 198 aa42.36■■■■■ 4.37
SH2B1-209ENST00000563674 CFTRP13569 1480 aa42.22■■■■■ 4.35
SH2B1-209ENST00000563674 MRC2Q9UBG0 1479 aa42.21■■■■■ 4.35
SH2B1-209ENST00000563674 CEP164Q9UPV0 1460 aa42.16■■■■■ 4.34
SH2B1-209ENST00000563674 FANCD2Q9BXW9 1451 aa42.14■■■■■ 4.34
SH2B1-209ENST00000563674 WDR62O43379 1518 aa42.03■■■■■ 4.32
SH2B1-209ENST00000563674 CCDC88BA6NC98 1476 aa41.99■■■■■ 4.31
SH2B1-209ENST00000563674 PRDM2Q13029 1718 aa41.7■■■■■ 4.27
SH2B1-209ENST00000563674 URB2Q14146 1524 aaKnown RBP41.69■■■■■ 4.27
SH2B1-209ENST00000563674 ABCC8Q09428 1581 aa41.42■■■■■ 4.22
SH2B1-209ENST00000563674 TOPBP1Q92547 1522 aa41.36■■■■■ 4.21
SH2B1-209ENST00000563674 SUPT5HO00267 1087 aaKnown RBP41.35■■■■■ 4.21
SH2B1-209ENST00000563674 IFT140Q96RY7 1462 aa41.31■■■■■ 4.2
SH2B1-209ENST00000563674 DNMBPQ6XZF7 1577 aa41.25■■■■■ 4.19
SH2B1-209ENST00000563674 OSCARQ8IYS5 282 aa41.13■■■■■ 4.17
SH2B1-209ENST00000563674 ZNF608Q9ULD9 1512 aaPredicted RBP41.09■■■■■ 4.17
SH2B1-209ENST00000563674 POLA1P09884 1462 aaPredicted RBP40.97■■■■■ 4.15
SH2B1-209ENST00000563674 TARBP1Q13395 1621 aaKnown RBP40.89■■■■■ 4.14
SH2B1-209ENST00000563674 EIF4G3O43432 1585 aaKnown RBP40.87■■■■■ 4.13
SH2B1-209ENST00000563674 SOGA1O94964 1423 aa40.87■■■■■ 4.13
SH2B1-209ENST00000563674 AQRO60306 1485 aaKnown RBP eCLIP40.84■■■■■ 4.135e-7■■■■■ 34.4
SH2B1-209ENST00000563674 RAD54L2Q9Y4B4 1467 aa40.81■■■■■ 4.12
SH2B1-209ENST00000563674 FGD5Q6ZNL6 1462 aa40.79■■■■■ 4.12
SH2B1-209ENST00000563674 CUX1P39880 1505 aa40.78■■■■■ 4.12
SH2B1-209ENST00000563674 TRIM41Q8WV44 630 aa40.75■■■■■ 4.11
SH2B1-209ENST00000563674 TDRD9Q8NDG6 1382 aaKnown RBP40.7■■■■■ 4.11
SH2B1-209ENST00000563674 WDR97A6NE52 1622 aa40.61■■■■■ 4.09
SH2B1-209ENST00000563674 FBLN2P98095 1184 aa40.61■■■■■ 4.09
SH2B1-209ENST00000563674 GRIN2BQ13224 1484 aa40.45■■■■■ 4.07
SH2B1-209ENST00000563674 CHD1O14646 1710 aa40.44■■■■■ 4.06
SH2B1-209ENST00000563674 SNAPC4Q5SXM2 1469 aa40.44■■■■■ 4.06
SH2B1-209ENST00000563674 CHMP7Q8WUX9 453 aaPredicted RBP40.4■■■■■ 4.06
SH2B1-209ENST00000563674 MAGI1Q96QZ7 1491 aaPredicted RBP40.39■■■■■ 4.06
SH2B1-209ENST00000563674 WRNQ14191 1432 aaPredicted RBP eCLIP40.39■■■■■ 4.06
SH2B1-209ENST00000563674 ABCA10Q8WWZ4 1543 aa40.37■■■■■ 4.05
SH2B1-209ENST00000563674 GAPVD1Q14C86 1478 aa40.36■■■■■ 4.05
SH2B1-209ENST00000563674 RIMBP3CA6NJZ7 1639 aa40.34■■■■■ 4.05
SH2B1-209ENST00000563674 RIMBP3BA6NNM3 1639 aa40.34■■■■■ 4.05
SH2B1-209ENST00000563674 RIMBP3Q9UFD9 1639 aa40.34■■■■■ 4.05
SH2B1-209ENST00000563674 ARHGEF11O15085 1522 aa40.32■■■■■ 4.05
SH2B1-209ENST00000563674 TOP2BQ02880 1626 aa40.28■■■■■ 4.04
SH2B1-209ENST00000563674 SYNJ2O15056 1496 aa40.24■■■■■ 4.03
SH2B1-209ENST00000563674 BIVM-ERCC5R4GMW8 1640 aa40.24■■■■■ 4.03
SH2B1-209ENST00000563674 SYNJ1O43426 1573 aa40.19■■■■■ 4.02
SH2B1-209ENST00000563674 ABCA5Q8WWZ7 1642 aa40.18■■■■■ 4.02
SH2B1-209ENST00000563674 PBRM1Q86U86 1689 aa40.18■■■■■ 4.02
SH2B1-209ENST00000563674 CYB5RLQ6IPT4 315 aa40.1■■■■■ 4.01
SH2B1-209ENST00000563674 CLASP1Q7Z460 1538 aa40.04■■■■■ 4
SH2B1-209ENST00000563674 ARAP1Q96P48 1450 aa39.94■■■■□ 3.98
SH2B1-209ENST00000563674 FHAD1B1AJZ9 1412 aa39.89■■■■□ 3.98
SH2B1-209ENST00000563674 GRIN2AQ12879 1464 aa39.88■■■■□ 3.98
SH2B1-209ENST00000563674 ERICH3Q5RHP9 1530 aa39.88■■■■□ 3.97
SH2B1-209ENST00000563674 ADAMTS12P58397 1594 aa39.87■■■■□ 3.97
SH2B1-209ENST00000563674 NUP160Q12769 1436 aa39.73■■■■□ 3.95
SH2B1-209ENST00000563674 CEP170Q5SW79 1584 aa39.64■■■■□ 3.94
SH2B1-209ENST00000563674 KIF27Q86VH2 1401 aa39.64■■■■□ 3.94
SH2B1-209ENST00000563674 TRHP20396 242 aaPredicted RBP39.56■■■■□ 3.92
SH2B1-209ENST00000563674 IGF1RP08069 1367 aa39.51■■■■□ 3.92
SH2B1-209ENST00000563674 JPH4Q96JJ6 628 aa39.43■■■■□ 3.9
SH2B1-209ENST00000563674 SHROOM2Q13796 1616 aa39.42■■■■□ 3.9
SH2B1-209ENST00000563674 ERCC6L2Q5T890 1561 aa39.4■■■■□ 3.9
SH2B1-209ENST00000563674 CUL7Q14999 1698 aa39.37■■■■□ 3.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms