RNA–Protein interactions for RNA: ENST00000563597.5

PPP4C-206, Transcript of protein phosphatase 4 catalytic subunit, humanhuman

TSL 3

Gene PPP4C, Length 815 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4C-206ENST00000563597 NISCHQ9Y2I1 1504 aa61.3■■■■■ 7.4
PPP4C-206ENST00000563597 CCDC180Q9P1Z9 1646 aa54.78■■■■■ 6.36
PPP4C-206ENST00000563597 ABCC9O60706 1549 aa54.1■■■■■ 6.25
PPP4C-206ENST00000563597 RB1CC1Q8TDY2 1594 aa51.84■■■■■ 5.89
PPP4C-206ENST00000563597 NACADO15069 1562 aa51.64■■■■■ 5.86
PPP4C-206ENST00000563597 DCAF8L2P0C7V8 631 aa51.4■■■■■ 5.82
PPP4C-206ENST00000563597 MYO15BQ96JP2 1530 aa51.18■■■■■ 5.78
PPP4C-206ENST00000563597 ZCCHC6Q5VYS8 1495 aaKnown RBP50.94■■■■■ 5.75
PPP4C-206ENST00000563597 DCAF1Q9Y4B6 1507 aa50.72■■■■■ 5.71
PPP4C-206ENST00000563597 UNC13AQ9UPW8 1703 aa50.61■■■■■ 5.69
PPP4C-206ENST00000563597 PABPN1Q86U42 306 aaKnown RBP eCLIP50.44■■■■■ 5.67
PPP4C-206ENST00000563597 BICRAQ9NZM4 1560 aa50.26■■■■■ 5.64
PPP4C-206ENST00000563597 DNAJC5BQ9UF47 199 aa50.17■■■■■ 5.62
PPP4C-206ENST00000563597 SCRIBQ14160 1630 aa49.88■■■■■ 5.58
PPP4C-206ENST00000563597 SHROOM4Q9ULL8 1493 aa49.77■■■■■ 5.56
PPP4C-206ENST00000563597 EIF4G1Q04637 1599 aaKnown RBP49■■■■■ 5.43
PPP4C-206ENST00000563597 CC2D2AQ9P2K1 1620 aa48.93■■■■■ 5.42
PPP4C-206ENST00000563597 CECR2Q9BXF3 1484 aa48.71■■■■■ 5.39
PPP4C-206ENST00000563597 SMARCA4P51532 1647 aa47.68■■■■■ 5.22
PPP4C-206ENST00000563597 NCAPD3P42695 1498 aa47.66■■■■■ 5.22
PPP4C-206ENST00000563597 ATAD2BQ9ULI0 1458 aa47.57■■■■■ 5.21
PPP4C-206ENST00000563597 BAZ1AQ9NRL2 1556 aaPredicted RBP47.57■■■■■ 5.21
PPP4C-206ENST00000563597 SMARCA2P51531 1590 aa47.52■■■■■ 5.2
PPP4C-206ENST00000563597 HMGXB3Q12766 1538 aa47.38■■■■■ 5.18
PPP4C-206ENST00000563597 PEG3Q9GZU2 1588 aa47.26■■■■■ 5.16
PPP4C-206ENST00000563597 MROH2BQ7Z745 1585 aa47.2■■■■■ 5.15
PPP4C-206ENST00000563597 BAZ1BQ9UIG0 1483 aaKnown RBP47.16■■■■■ 5.14
PPP4C-206ENST00000563597 ERCC6Q03468 1493 aa46.71■■■■■ 5.07
PPP4C-206ENST00000563597 WIZO95785 1651 aa46.66■■■■■ 5.06
PPP4C-206ENST00000563597 NESP48681 1621 aa46.65■■■■■ 5.06
PPP4C-206ENST00000563597 LAMC3Q9Y6N6 1575 aa46.5■■■■■ 5.03
PPP4C-206ENST00000563597 RSF1Q96T23 1441 aaPredicted RBP46.47■■■■■ 5.03
PPP4C-206ENST00000563597 CUX2O14529 1486 aa46.46■■■■■ 5.03
PPP4C-206ENST00000563597 CADPSQ9ULU8 1353 aa46.22■■■■■ 4.99
PPP4C-206ENST00000563597 PDS5BQ9NTI5 1447 aa46.21■■■■■ 4.99
PPP4C-206ENST00000563597 TOP2AP11388 1531 aaKnown RBP46.17■■■■■ 4.98
PPP4C-206ENST00000563597 THOC2Q8NI27 1593 aaKnown RBP46.09■■■■■ 4.97
PPP4C-206ENST00000563597 KIF21AQ7Z4S6 1674 aa46.08■■■■■ 4.97
PPP4C-206ENST00000563597 CFTRP13569 1480 aa45.84■■■■■ 4.93
PPP4C-206ENST00000563597 MRC2Q9UBG0 1479 aa45.75■■■■■ 4.91
PPP4C-206ENST00000563597 CEP164Q9UPV0 1460 aa45.7■■■■■ 4.91
PPP4C-206ENST00000563597 DNAJC5Q9H3Z4 198 aa45.7■■■■■ 4.91
PPP4C-206ENST00000563597 FANCD2Q9BXW9 1451 aa45.69■■■■■ 4.91
PPP4C-206ENST00000563597 WDR62O43379 1518 aa45.62■■■■■ 4.89
PPP4C-206ENST00000563597 CCDC88BA6NC98 1476 aa45.6■■■■■ 4.89
PPP4C-206ENST00000563597 PRDM2Q13029 1718 aa45.43■■■■■ 4.86
PPP4C-206ENST00000563597 URB2Q14146 1524 aaKnown RBP45.26■■■■■ 4.84
PPP4C-206ENST00000563597 ABCC8Q09428 1581 aa44.9■■■■■ 4.78
PPP4C-206ENST00000563597 TOPBP1Q92547 1522 aa44.89■■■■■ 4.78
PPP4C-206ENST00000563597 SUPT5HO00267 1087 aaKnown RBP44.81■■■■■ 4.76
PPP4C-206ENST00000563597 DNMBPQ6XZF7 1577 aa44.8■■■■■ 4.76
PPP4C-206ENST00000563597 IFT140Q96RY7 1462 aa44.77■■■■■ 4.76
PPP4C-206ENST00000563597 ZNF608Q9ULD9 1512 aaPredicted RBP44.58■■■■■ 4.73
PPP4C-206ENST00000563597 POLA1P09884 1462 aaPredicted RBP44.47■■■■■ 4.71
PPP4C-206ENST00000563597 TARBP1Q13395 1621 aaKnown RBP44.45■■■■■ 4.71
PPP4C-206ENST00000563597 OSCARQ8IYS5 282 aa44.41■■■■■ 4.7
PPP4C-206ENST00000563597 EIF4G3O43432 1585 aaKnown RBP44.4■■■■■ 4.7
PPP4C-206ENST00000563597 CUX1P39880 1505 aa44.33■■■■■ 4.69
PPP4C-206ENST00000563597 SOGA1O94964 1423 aa44.28■■■■■ 4.68
PPP4C-206ENST00000563597 FGD5Q6ZNL6 1462 aa44.27■■■■■ 4.68
PPP4C-206ENST00000563597 AQRO60306 1485 aaKnown RBP eCLIP44.26■■■■■ 4.688e-7■■■■■ 28.7
PPP4C-206ENST00000563597 RAD54L2Q9Y4B4 1467 aa44.26■■■■■ 4.68
PPP4C-206ENST00000563597 WDR97A6NE52 1622 aa44.11■■■■■ 4.65
PPP4C-206ENST00000563597 TDRD9Q8NDG6 1382 aaKnown RBP44.09■■■■■ 4.65
PPP4C-206ENST00000563597 CHD1O14646 1710 aa43.93■■■■■ 4.62
PPP4C-206ENST00000563597 TRIM41Q8WV44 630 aa43.89■■■■■ 4.62
PPP4C-206ENST00000563597 GRIN2BQ13224 1484 aa43.85■■■■■ 4.61
PPP4C-206ENST00000563597 SNAPC4Q5SXM2 1469 aa43.85■■■■■ 4.61
PPP4C-206ENST00000563597 WRNQ14191 1432 aaPredicted RBP eCLIP43.84■■■■■ 4.61
PPP4C-206ENST00000563597 FBLN2P98095 1184 aa43.84■■■■■ 4.61
PPP4C-206ENST00000563597 ABCA10Q8WWZ4 1543 aa43.83■■■■■ 4.61
PPP4C-206ENST00000563597 TOP2BQ02880 1626 aa43.81■■■■■ 4.6
PPP4C-206ENST00000563597 MAGI1Q96QZ7 1491 aaPredicted RBP43.81■■■■■ 4.6
PPP4C-206ENST00000563597 BIVM-ERCC5R4GMW8 1640 aa43.81■■■■■ 4.6
PPP4C-206ENST00000563597 GAPVD1Q14C86 1478 aa43.76■■■■■ 4.6
PPP4C-206ENST00000563597 RIMBP3CA6NJZ7 1639 aa43.74■■■■■ 4.59
PPP4C-206ENST00000563597 RIMBP3BA6NNM3 1639 aa43.74■■■■■ 4.59
PPP4C-206ENST00000563597 RIMBP3Q9UFD9 1639 aa43.74■■■■■ 4.59
PPP4C-206ENST00000563597 SYNJ1O43426 1573 aa43.74■■■■■ 4.59
PPP4C-206ENST00000563597 ABCA5Q8WWZ7 1642 aa43.7■■■■■ 4.59
PPP4C-206ENST00000563597 PBRM1Q86U86 1689 aa43.69■■■■■ 4.58
PPP4C-206ENST00000563597 ARHGEF11O15085 1522 aa43.68■■■■■ 4.58
PPP4C-206ENST00000563597 CHMP7Q8WUX9 453 aaPredicted RBP43.66■■■■■ 4.58
PPP4C-206ENST00000563597 SYNJ2O15056 1496 aa43.64■■■■■ 4.58
PPP4C-206ENST00000563597 CLASP1Q7Z460 1538 aa43.48■■■■■ 4.55
PPP4C-206ENST00000563597 ADAMTS12P58397 1594 aa43.33■■■■■ 4.53
PPP4C-206ENST00000563597 ERICH3Q5RHP9 1530 aa43.31■■■■■ 4.52
PPP4C-206ENST00000563597 CYB5RLQ6IPT4 315 aa43.29■■■■■ 4.52
PPP4C-206ENST00000563597 ARAP1Q96P48 1450 aa43.29■■■■■ 4.52
PPP4C-206ENST00000563597 GRIN2AQ12879 1464 aa43.28■■■■■ 4.52
PPP4C-206ENST00000563597 FHAD1B1AJZ9 1412 aa43.25■■■■■ 4.51
PPP4C-206ENST00000563597 NUP160Q12769 1436 aa43.12■■■■■ 4.49
PPP4C-206ENST00000563597 CEP170Q5SW79 1584 aa43.07■■■■■ 4.49
PPP4C-206ENST00000563597 KIF27Q86VH2 1401 aa42.98■■■■■ 4.47
PPP4C-206ENST00000563597 SHROOM2Q13796 1616 aa42.86■■■■■ 4.45
PPP4C-206ENST00000563597 IGF1RP08069 1367 aa42.86■■■■■ 4.45
PPP4C-206ENST00000563597 CUL7Q14999 1698 aa42.8■■■■■ 4.44
PPP4C-206ENST00000563597 ERCC6L2Q5T890 1561 aa42.79■■■■■ 4.44
PPP4C-206ENST00000563597 RUSC2Q8N2Y8 1516 aa42.71■■■■■ 4.43
PPP4C-206ENST00000563597 JPH4Q96JJ6 628 aa42.65■■■■■ 4.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms