RNA–Protein interactions for RNA: ENST00000563507.5

CDIP1-206, Transcript of cell death inducing p53 target 1, humanhuman

TSL 2 BASIC

Gene CDIP1, Length 1,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-206ENST00000563507 NISCHQ9Y2I1 1504 aa38.73■■■■□ 3.79
CDIP1-206ENST00000563507 CCDC180Q9P1Z9 1646 aa34.32■■■■□ 3.08
CDIP1-206ENST00000563507 ABCC9O60706 1549 aa33.74■■■□□ 2.99
CDIP1-206ENST00000563507 DCAF8L2P0C7V8 631 aa32.56■■■□□ 2.8
CDIP1-206ENST00000563507 RB1CC1Q8TDY2 1594 aa32.38■■■□□ 2.77
CDIP1-206ENST00000563507 NACADO15069 1562 aa32.34■■■□□ 2.77
CDIP1-206ENST00000563507 ZCCHC6Q5VYS8 1495 aaKnown RBP32.22■■■□□ 2.75
CDIP1-206ENST00000563507 MYO15BQ96JP2 1530 aa32.12■■■□□ 2.73
CDIP1-206ENST00000563507 DCAF1Q9Y4B6 1507 aa31.99■■■□□ 2.71
CDIP1-206ENST00000563507 PABPN1Q86U42 306 aaKnown RBP eCLIP31.62■■■□□ 2.65
CDIP1-206ENST00000563507 UNC13AQ9UPW8 1703 aa31.58■■■□□ 2.65
CDIP1-206ENST00000563507 SCRIBQ14160 1630 aa31.4■■■□□ 2.62
CDIP1-206ENST00000563507 BICRAQ9NZM4 1560 aa31.4■■■□□ 2.62
CDIP1-206ENST00000563507 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
CDIP1-206ENST00000563507 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
CDIP1-206ENST00000563507 EIF4G1Q04637 1599 aaKnown RBP30.57■■■□□ 2.48
CDIP1-206ENST00000563507 CC2D2AQ9P2K1 1620 aa30.47■■■□□ 2.47
CDIP1-206ENST00000563507 CECR2Q9BXF3 1484 aa30.3■■■□□ 2.44
CDIP1-206ENST00000563507 SMARCA4P51532 1647 aa30.01■■■□□ 2.39
CDIP1-206ENST00000563507 BAZ1AQ9NRL2 1556 aaPredicted RBP29.99■■■□□ 2.39
CDIP1-206ENST00000563507 ATAD2BQ9ULI0 1458 aa29.91■■■□□ 2.38
CDIP1-206ENST00000563507 NCAPD3P42695 1498 aa29.89■■■□□ 2.38
CDIP1-206ENST00000563507 MROH2BQ7Z745 1585 aa29.87■■■□□ 2.37
CDIP1-206ENST00000563507 SMARCA2P51531 1590 aa29.82■■■□□ 2.36
CDIP1-206ENST00000563507 PEG3Q9GZU2 1588 aa29.69■■■□□ 2.34
CDIP1-206ENST00000563507 HMGXB3Q12766 1538 aa29.67■■■□□ 2.34
CDIP1-206ENST00000563507 BAZ1BQ9UIG0 1483 aaKnown RBP29.64■■■□□ 2.34
CDIP1-206ENST00000563507 RSF1Q96T23 1441 aaPredicted RBP29.54■■■□□ 2.32
CDIP1-206ENST00000563507 WIZO95785 1651 aa29.52■■■□□ 2.32
CDIP1-206ENST00000563507 NESP48681 1621 aa29.19■■■□□ 2.26
CDIP1-206ENST00000563507 TOP2AP11388 1531 aaKnown RBP29.18■■■□□ 2.26
CDIP1-206ENST00000563507 ERCC6Q03468 1493 aa29.07■■■□□ 2.24
CDIP1-206ENST00000563507 CADPSQ9ULU8 1353 aa29.06■■■□□ 2.24
CDIP1-206ENST00000563507 LAMC3Q9Y6N6 1575 aa29.04■■■□□ 2.24
CDIP1-206ENST00000563507 PDS5BQ9NTI5 1447 aa28.93■■■□□ 2.22
CDIP1-206ENST00000563507 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
CDIP1-206ENST00000563507 CCDC88BA6NC98 1476 aa28.92■■■□□ 2.22
CDIP1-206ENST00000563507 CFTRP13569 1480 aa28.83■■■□□ 2.21
CDIP1-206ENST00000563507 KIF21AQ7Z4S6 1674 aa28.75■■■□□ 2.19
CDIP1-206ENST00000563507 CUX2O14529 1486 aa28.71■■■□□ 2.19
CDIP1-206ENST00000563507 FANCD2Q9BXW9 1451 aa28.69■■■□□ 2.18
CDIP1-206ENST00000563507 THOC2Q8NI27 1593 aaKnown RBP28.64■■■□□ 2.18
CDIP1-206ENST00000563507 CEP164Q9UPV0 1460 aa28.63■■■□□ 2.17
CDIP1-206ENST00000563507 MRC2Q9UBG0 1479 aa28.59■■■□□ 2.17
CDIP1-206ENST00000563507 PRDM2Q13029 1718 aa28.48■■■□□ 2.15
CDIP1-206ENST00000563507 WDR62O43379 1518 aa28.45■■■□□ 2.15
CDIP1-206ENST00000563507 URB2Q14146 1524 aaKnown RBP28.39■■■□□ 2.14
CDIP1-206ENST00000563507 TOPBP1Q92547 1522 aa28.22■■■□□ 2.11
CDIP1-206ENST00000563507 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
CDIP1-206ENST00000563507 DNMBPQ6XZF7 1577 aa28.14■■■□□ 2.1
CDIP1-206ENST00000563507 IFT140Q96RY7 1462 aa28.04■■■□□ 2.08
CDIP1-206ENST00000563507 CUX1P39880 1505 aa28■■■□□ 2.07
CDIP1-206ENST00000563507 POLA1P09884 1462 aaPredicted RBP27.98■■■□□ 2.07
CDIP1-206ENST00000563507 DNAJC5Q9H3Z4 198 aa27.96■■■□□ 2.07
CDIP1-206ENST00000563507 ZNF608Q9ULD9 1512 aaPredicted RBP27.94■■■□□ 2.06
CDIP1-206ENST00000563507 SOGA1O94964 1423 aa27.93■■■□□ 2.06
CDIP1-206ENST00000563507 FGD5Q6ZNL6 1462 aa27.91■■■□□ 2.06
CDIP1-206ENST00000563507 RAD54L2Q9Y4B4 1467 aa27.9■■■□□ 2.06
CDIP1-206ENST00000563507 TARBP1Q13395 1621 aaKnown RBP27.87■■■□□ 2.05
CDIP1-206ENST00000563507 WRNQ14191 1432 aaPredicted RBP eCLIP27.85■■■□□ 2.05
CDIP1-206ENST00000563507 AQRO60306 1485 aaKnown RBP eCLIP27.82■■■□□ 2.04
CDIP1-206ENST00000563507 TDRD9Q8NDG6 1382 aaKnown RBP27.79■■■□□ 2.04
CDIP1-206ENST00000563507 EIF4G3O43432 1585 aaKnown RBP27.74■■■□□ 2.03
CDIP1-206ENST00000563507 SYNJ1O43426 1573 aa27.73■■■□□ 2.03
CDIP1-206ENST00000563507 TOP2BQ02880 1626 aa27.73■■■□□ 2.03
CDIP1-206ENST00000563507 BIVM-ERCC5R4GMW8 1640 aa27.69■■■□□ 2.02
CDIP1-206ENST00000563507 OSCARQ8IYS5 282 aa27.66■■■□□ 2.02
CDIP1-206ENST00000563507 ABCA10Q8WWZ4 1543 aa27.63■■■□□ 2.01
CDIP1-206ENST00000563507 WDR97A6NE52 1622 aa27.6■■■□□ 2.01
CDIP1-206ENST00000563507 FBLN2P98095 1184 aa27.57■■■□□ 2
CDIP1-206ENST00000563507 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
CDIP1-206ENST00000563507 GRIN2BQ13224 1484 aa27.55■■■□□ 2
CDIP1-206ENST00000563507 SNAPC4Q5SXM2 1469 aa27.5■■□□□ 1.99
CDIP1-206ENST00000563507 ABCA5Q8WWZ7 1642 aa27.47■■□□□ 1.99
CDIP1-206ENST00000563507 CHMP7Q8WUX9 453 aaPredicted RBP27.46■■□□□ 1.99
CDIP1-206ENST00000563507 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
CDIP1-206ENST00000563507 PBRM1Q86U86 1689 aa27.4■■□□□ 1.98
CDIP1-206ENST00000563507 CHD1O14646 1710 aa27.39■■□□□ 1.98
CDIP1-206ENST00000563507 SYNJ2O15056 1496 aa27.36■■□□□ 1.97
CDIP1-206ENST00000563507 TRIM41Q8WV44 630 aa27.3■■□□□ 1.96
CDIP1-206ENST00000563507 ERICH3Q5RHP9 1530 aa27.28■■□□□ 1.96
CDIP1-206ENST00000563507 KIF27Q86VH2 1401 aa27.28■■□□□ 1.96
CDIP1-206ENST00000563507 FHAD1B1AJZ9 1412 aa27.25■■□□□ 1.95
CDIP1-206ENST00000563507 IGF1RP08069 1367 aa27.22■■□□□ 1.95
CDIP1-206ENST00000563507 ADAMTS12P58397 1594 aa27.21■■□□□ 1.95
CDIP1-206ENST00000563507 GRIN2AQ12879 1464 aa27.18■■□□□ 1.94
CDIP1-206ENST00000563507 CLASP1Q7Z460 1538 aa27.11■■□□□ 1.93
CDIP1-206ENST00000563507 ARHGEF11O15085 1522 aa27.09■■□□□ 1.93
CDIP1-206ENST00000563507 RIMBP3CA6NJZ7 1639 aa27.08■■□□□ 1.93
CDIP1-206ENST00000563507 RIMBP3BA6NNM3 1639 aa27.08■■□□□ 1.93
CDIP1-206ENST00000563507 RIMBP3Q9UFD9 1639 aa27.08■■□□□ 1.93
CDIP1-206ENST00000563507 RUSC2Q8N2Y8 1516 aa27.06■■□□□ 1.92
CDIP1-206ENST00000563507 NUP160Q12769 1436 aa27.05■■□□□ 1.92
CDIP1-206ENST00000563507 CARMIL1Q5VZK9 1371 aa27.04■■□□□ 1.92
CDIP1-206ENST00000563507 CEP170Q5SW79 1584 aa27.02■■□□□ 1.92
CDIP1-206ENST00000563507 CUL7Q14999 1698 aa27■■□□□ 1.91
CDIP1-206ENST00000563507 CYB5RLQ6IPT4 315 aa26.99■■□□□ 1.91
CDIP1-206ENST00000563507 CHIC1Q5VXU3 224 aa26.97■■□□□ 1.91
CDIP1-206ENST00000563507 JPH4Q96JJ6 628 aa26.9■■□□□ 1.9
CDIP1-206ENST00000563507 ARAP1Q96P48 1450 aa26.88■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms