RNA–Protein interactions for RNA: ENST00000563494.5

GGA2-205, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-205ENST00000563494 NISCHQ9Y2I1 1504 aa52.64■■■■■ 6.02
GGA2-205ENST00000563494 CCDC180Q9P1Z9 1646 aa47.08■■■■■ 5.13
GGA2-205ENST00000563494 ABCC9O60706 1549 aa46.72■■■■■ 5.07
GGA2-205ENST00000563494 RB1CC1Q8TDY2 1594 aa44.61■■■■■ 4.73
GGA2-205ENST00000563494 NACADO15069 1562 aa44.43■■■■■ 4.7
GGA2-205ENST00000563494 DCAF8L2P0C7V8 631 aa44.06■■■■■ 4.64
GGA2-205ENST00000563494 MYO15BQ96JP2 1530 aa44.03■■■■■ 4.64
GGA2-205ENST00000563494 DNAJC5BQ9UF47 199 aa43.74■■■■■ 4.59
GGA2-205ENST00000563494 UNC13AQ9UPW8 1703 aa43.71■■■■■ 4.59
GGA2-205ENST00000563494 ZCCHC6Q5VYS8 1495 aaKnown RBP43.7■■■■■ 4.59
GGA2-205ENST00000563494 DCAF1Q9Y4B6 1507 aa43.56■■■■■ 4.56
GGA2-205ENST00000563494 PABPN1Q86U42 306 aaKnown RBP eCLIP43.55■■■■■ 4.56
GGA2-205ENST00000563494 BICRAQ9NZM4 1560 aa43.46■■■■■ 4.55
GGA2-205ENST00000563494 SHROOM4Q9ULL8 1493 aa42.82■■■■■ 4.45
GGA2-205ENST00000563494 SCRIBQ14160 1630 aa42.82■■■■■ 4.44
GGA2-205ENST00000563494 CC2D2AQ9P2K1 1620 aa42.28■■■■■ 4.36
GGA2-205ENST00000563494 EIF4G1Q04637 1599 aaKnown RBP42.27■■■■■ 4.36
GGA2-205ENST00000563494 CECR2Q9BXF3 1484 aa42.07■■■■■ 4.33
GGA2-205ENST00000563494 NCAPD3P42695 1498 aa41.09■■■■■ 4.17
GGA2-205ENST00000563494 SMARCA4P51532 1647 aa40.97■■■■■ 4.15
GGA2-205ENST00000563494 ATAD2BQ9ULI0 1458 aa40.96■■■■■ 4.15
GGA2-205ENST00000563494 SMARCA2P51531 1590 aa40.8■■■■■ 4.12
GGA2-205ENST00000563494 BAZ1AQ9NRL2 1556 aaPredicted RBP40.78■■■■■ 4.12
GGA2-205ENST00000563494 HMGXB3Q12766 1538 aa40.75■■■■■ 4.11
GGA2-205ENST00000563494 PEG3Q9GZU2 1588 aa40.66■■■■■ 4.1
GGA2-205ENST00000563494 MROH2BQ7Z745 1585 aa40.57■■■■■ 4.08
GGA2-205ENST00000563494 BAZ1BQ9UIG0 1483 aaKnown RBP40.48■■■■■ 4.07
GGA2-205ENST00000563494 NESP48681 1621 aa40.28■■■■■ 4.04
GGA2-205ENST00000563494 ERCC6Q03468 1493 aa40.21■■■■■ 4.03
GGA2-205ENST00000563494 CUX2O14529 1486 aa40.18■■■■■ 4.02
GGA2-205ENST00000563494 WIZO95785 1651 aa40.06■■■■■ 4
GGA2-205ENST00000563494 LAMC3Q9Y6N6 1575 aa40.03■■■■■ 4
GGA2-205ENST00000563494 DNAJC5Q9H3Z4 198 aa39.88■■■■□ 3.97
GGA2-205ENST00000563494 RSF1Q96T23 1441 aaPredicted RBP39.84■■■■□ 3.97
GGA2-205ENST00000563494 THOC2Q8NI27 1593 aaKnown RBP39.84■■■■□ 3.97
GGA2-205ENST00000563494 CADPSQ9ULU8 1353 aa39.79■■■■□ 3.96
GGA2-205ENST00000563494 KIF21AQ7Z4S6 1674 aa39.75■■■■□ 3.95
GGA2-205ENST00000563494 PDS5BQ9NTI5 1447 aa39.74■■■■□ 3.95
GGA2-205ENST00000563494 TOP2AP11388 1531 aaKnown RBP39.55■■■■□ 3.92
GGA2-205ENST00000563494 CFTRP13569 1480 aa39.44■■■■□ 3.9
GGA2-205ENST00000563494 MRC2Q9UBG0 1479 aa39.39■■■■□ 3.9
GGA2-205ENST00000563494 WDR62O43379 1518 aa39.35■■■■□ 3.89
GGA2-205ENST00000563494 FANCD2Q9BXW9 1451 aa39.3■■■■□ 3.88
GGA2-205ENST00000563494 CEP164Q9UPV0 1460 aa39.27■■■■□ 3.88
GGA2-205ENST00000563494 CCDC88BA6NC98 1476 aa39.15■■■■□ 3.86
GGA2-205ENST00000563494 URB2Q14146 1524 aaKnown RBP39.02■■■■□ 3.84
GGA2-205ENST00000563494 PRDM2Q13029 1718 aa39■■■■□ 3.83
GGA2-205ENST00000563494 TOPBP1Q92547 1522 aa38.62■■■■□ 3.77
GGA2-205ENST00000563494 ABCC8Q09428 1581 aa38.53■■■■□ 3.76
GGA2-205ENST00000563494 IFT140Q96RY7 1462 aa38.51■■■■□ 3.76
GGA2-205ENST00000563494 DNMBPQ6XZF7 1577 aa38.48■■■■□ 3.75
GGA2-205ENST00000563494 ZNF608Q9ULD9 1512 aaPredicted RBP38.48■■■■□ 3.75
GGA2-205ENST00000563494 OSCARQ8IYS5 282 aa38.37■■■■□ 3.73
GGA2-205ENST00000563494 TARBP1Q13395 1621 aaKnown RBP38.31■■■■□ 3.72
GGA2-205ENST00000563494 POLA1P09884 1462 aaPredicted RBP38.25■■■■□ 3.71
GGA2-205ENST00000563494 EIF4G3O43432 1585 aaKnown RBP38.23■■■■□ 3.71
GGA2-205ENST00000563494 AQRO60306 1485 aaKnown RBP eCLIP38.14■■■■□ 3.73e-8■■■■□ 24
GGA2-205ENST00000563494 SUPT5HO00267 1087 aaKnown RBP38.1■■■■□ 3.69
GGA2-205ENST00000563494 RAD54L2Q9Y4B4 1467 aa38.09■■■■□ 3.69
GGA2-205ENST00000563494 CUX1P39880 1505 aa38.08■■■■□ 3.69
GGA2-205ENST00000563494 SOGA1O94964 1423 aa38.04■■■■□ 3.68
GGA2-205ENST00000563494 TRIM41Q8WV44 630 aa38.04■■■■□ 3.68
GGA2-205ENST00000563494 FGD5Q6ZNL6 1462 aa38.02■■■■□ 3.68
GGA2-205ENST00000563494 TDRD9Q8NDG6 1382 aaKnown RBP37.93■■■■□ 3.66
GGA2-205ENST00000563494 WDR97A6NE52 1622 aa37.88■■■■□ 3.65
GGA2-205ENST00000563494 CHD1O14646 1710 aa37.88■■■■□ 3.65
GGA2-205ENST00000563494 RIMBP3CA6NJZ7 1639 aa37.86■■■■□ 3.65
GGA2-205ENST00000563494 RIMBP3BA6NNM3 1639 aa37.86■■■■□ 3.65
GGA2-205ENST00000563494 RIMBP3Q9UFD9 1639 aa37.86■■■■□ 3.65
GGA2-205ENST00000563494 ARHGEF11O15085 1522 aa37.77■■■■□ 3.64
GGA2-205ENST00000563494 SNAPC4Q5SXM2 1469 aa37.71■■■■□ 3.63
GGA2-205ENST00000563494 GRIN2BQ13224 1484 aa37.67■■■■□ 3.62
GGA2-205ENST00000563494 MAGI1Q96QZ7 1491 aaPredicted RBP37.65■■■■□ 3.62
GGA2-205ENST00000563494 FBLN2P98095 1184 aa37.65■■■■□ 3.62
GGA2-205ENST00000563494 ABCA10Q8WWZ4 1543 aa37.65■■■■□ 3.62
GGA2-205ENST00000563494 GAPVD1Q14C86 1478 aa37.58■■■■□ 3.61
GGA2-205ENST00000563494 ABCA5Q8WWZ7 1642 aa37.58■■■■□ 3.61
GGA2-205ENST00000563494 BIVM-ERCC5R4GMW8 1640 aa37.55■■■■□ 3.6
GGA2-205ENST00000563494 TOP2BQ02880 1626 aa37.54■■■■□ 3.6
GGA2-205ENST00000563494 PBRM1Q86U86 1689 aa37.53■■■■□ 3.6
GGA2-205ENST00000563494 CLASP1Q7Z460 1538 aa37.53■■■■□ 3.6
GGA2-205ENST00000563494 SYNJ2O15056 1496 aa37.52■■■■□ 3.6
GGA2-205ENST00000563494 SYNJ1O43426 1573 aa37.51■■■■□ 3.59
GGA2-205ENST00000563494 WRNQ14191 1432 aaPredicted RBP eCLIP37.5■■■■□ 3.591e-7■■■■■ 66.8
GGA2-205ENST00000563494 CHMP7Q8WUX9 453 aaPredicted RBP37.49■■■■□ 3.59
GGA2-205ENST00000563494 ARAP1Q96P48 1450 aa37.45■■■■□ 3.59
GGA2-205ENST00000563494 CYB5RLQ6IPT4 315 aa37.42■■■■□ 3.58
GGA2-205ENST00000563494 ADAMTS12P58397 1594 aa37.21■■■■□ 3.55
GGA2-205ENST00000563494 GRIN2AQ12879 1464 aa37.2■■■■□ 3.55
GGA2-205ENST00000563494 ERICH3Q5RHP9 1530 aa37.16■■■■□ 3.54
GGA2-205ENST00000563494 NUP160Q12769 1436 aa37.13■■■■□ 3.53
GGA2-205ENST00000563494 FHAD1B1AJZ9 1412 aa37.12■■■■□ 3.53
GGA2-205ENST00000563494 CEP170Q5SW79 1584 aa37.08■■■■□ 3.53
GGA2-205ENST00000563494 ERCC6L2Q5T890 1561 aa36.96■■■■□ 3.51
GGA2-205ENST00000563494 SHROOM2Q13796 1616 aa36.95■■■■□ 3.51
GGA2-205ENST00000563494 IGF1RP08069 1367 aa36.81■■■■□ 3.48
GGA2-205ENST00000563494 TRHP20396 242 aaPredicted RBP36.78■■■■□ 3.48
GGA2-205ENST00000563494 KIF27Q86VH2 1401 aa36.74■■■■□ 3.47
GGA2-205ENST00000563494 JPH4Q96JJ6 628 aa36.7■■■■□ 3.47
GGA2-205ENST00000563494 RUSC2Q8N2Y8 1516 aa36.69■■■■□ 3.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.4 ms