RNA–Protein interactions for RNA: ENST00000563459.5

EARS2-207, Transcript of glutamyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EARS2, Length 3,840 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EARS2-207ENST00000563459 NISCHQ9Y2I1 1504 aa21.29■■□□□ 1
EARS2-207ENST00000563459 CCDC180Q9P1Z9 1646 aa18.44■□□□□ 0.54
EARS2-207ENST00000563459 DCAF8L2P0C7V8 631 aa17.99■□□□□ 0.47
EARS2-207ENST00000563459 SHROOM4Q9ULL8 1493 aa17.87■□□□□ 0.45
EARS2-207ENST00000563459 ZCCHC6Q5VYS8 1495 aaKnown RBP17.85■□□□□ 0.45
EARS2-207ENST00000563459 ABCC9O60706 1549 aa17.67■□□□□ 0.42
EARS2-207ENST00000563459 DCAF1Q9Y4B6 1507 aa17.53■□□□□ 0.4
EARS2-207ENST00000563459 SUPT5HO00267 1087 aaKnown RBP17.47■□□□□ 0.39
EARS2-207ENST00000563459 MYO15BQ96JP2 1530 aa17.37■□□□□ 0.37
EARS2-207ENST00000563459 NACADO15069 1562 aa17.28■□□□□ 0.36
EARS2-207ENST00000563459 RB1CC1Q8TDY2 1594 aa17.16■□□□□ 0.34
EARS2-207ENST00000563459 SCRIBQ14160 1630 aa17.11■□□□□ 0.33
EARS2-207ENST00000563459 CHIC1Q5VXU3 224 aa17.11■□□□□ 0.33
EARS2-207ENST00000563459 PELP1Q8IZL8 1130 aaKnown RBP17.03■□□□□ 0.32
EARS2-207ENST00000563459 HRCP23327 699 aa16.78■□□□□ 0.28
EARS2-207ENST00000563459 LOC105371045A0A1W2PR82 267 aa16.77■□□□□ 0.28
EARS2-207ENST00000563459 PABPN1Q86U42 306 aaKnown RBP eCLIP16.75■□□□□ 0.27
EARS2-207ENST00000563459 PPARGC1BQ86YN6 1023 aaKnown RBP16.75■□□□□ 0.27
EARS2-207ENST00000563459 PCGF6Q9BYE7 350 aa16.74■□□□□ 0.27
EARS2-207ENST00000563459 MYT1Q01538 1121 aa16.61■□□□□ 0.25
EARS2-207ENST00000563459 UNC13AQ9UPW8 1703 aa16.58■□□□□ 0.24
EARS2-207ENST00000563459 CECR2Q9BXF3 1484 aa16.57■□□□□ 0.24
EARS2-207ENST00000563459 RSF1Q96T23 1441 aaPredicted RBP16.56■□□□□ 0.24
EARS2-207ENST00000563459 BICRAQ9NZM4 1560 aa16.51■□□□□ 0.23
EARS2-207ENST00000563459 BAZ1AQ9NRL2 1556 aaPredicted RBP16.47■□□□□ 0.23
EARS2-207ENST00000563459 MROH2BQ7Z745 1585 aa16.45■□□□□ 0.22
EARS2-207ENST00000563459 SMARCA4P51532 1647 aa16.33■□□□□ 0.2
EARS2-207ENST00000563459 WIZO95785 1651 aa16.28■□□□□ 0.2
EARS2-207ENST00000563459 TRIM26Q12899 539 aaPredicted RBP16.18■□□□□ 0.18
EARS2-207ENST00000563459 FAM9AQ8IZU1 332 aaPredicted RBP16.18■□□□□ 0.18
EARS2-207ENST00000563459 EHMT2Q96KQ7 1210 aa16.17■□□□□ 0.18
EARS2-207ENST00000563459 TOP2AP11388 1531 aaKnown RBP16.14■□□□□ 0.17
EARS2-207ENST00000563459 SMARCA2P51531 1590 aa16.12■□□□□ 0.17
EARS2-207ENST00000563459 ATAD2BQ9ULI0 1458 aa16.12■□□□□ 0.17
EARS2-207ENST00000563459 EIF4G1Q04637 1599 aaKnown RBP16.1■□□□□ 0.17
EARS2-207ENST00000563459 BAZ1BQ9UIG0 1483 aaKnown RBP16.1■□□□□ 0.17
EARS2-207ENST00000563459 TRIM41Q8WV44 630 aa16.1■□□□□ 0.17
EARS2-207ENST00000563459 PEG3Q9GZU2 1588 aa16.05■□□□□ 0.16
EARS2-207ENST00000563459 CCDC88BA6NC98 1476 aa16.02■□□□□ 0.16
EARS2-207ENST00000563459 NCAPD3P42695 1498 aa15.97■□□□□ 0.15
EARS2-207ENST00000563459 HMGXB3Q12766 1538 aa15.89■□□□□ 0.13
EARS2-207ENST00000563459 SCAF1Q9H7N4 1312 aaKnown RBP15.89■□□□□ 0.13
EARS2-207ENST00000563459 CC2D2AQ9P2K1 1620 aa15.86■□□□□ 0.13
EARS2-207ENST00000563459 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
EARS2-207ENST00000563459 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.74■□□□□ 0.11
EARS2-207ENST00000563459 RUSC2Q8N2Y8 1516 aa15.72■□□□□ 0.11
EARS2-207ENST00000563459 SOGA1O94964 1423 aa15.69■□□□□ 0.1
EARS2-207ENST00000563459 WRNQ14191 1432 aaPredicted RBP eCLIP15.66■□□□□ 0.1
EARS2-207ENST00000563459 TTBK1Q5TCY1 1321 aaPredicted RBP15.65■□□□□ 0.1
EARS2-207ENST00000563459 CADPSQ9ULU8 1353 aa15.64■□□□□ 0.09
EARS2-207ENST00000563459 CFTRP13569 1480 aa15.61■□□□□ 0.09
EARS2-207ENST00000563459 ZEB1P37275 1124 aaPredicted RBP15.6■□□□□ 0.09
EARS2-207ENST00000563459 CEP162Q5TB80 1403 aa15.53■□□□□ 0.08
EARS2-207ENST00000563459 CENPBP07199 599 aaPredicted RBP15.53■□□□□ 0.08
EARS2-207ENST00000563459 DNAJC5BQ9UF47 199 aa15.52■□□□□ 0.08
EARS2-207ENST00000563459 GTF3C3Q9Y5Q9 886 aa15.5■□□□□ 0.07
EARS2-207ENST00000563459 NEUROD1Q13562 356 aa15.47■□□□□ 0.07
EARS2-207ENST00000563459 SYNJ1O43426 1573 aa15.46■□□□□ 0.07
EARS2-207ENST00000563459 ACIN1Q9UKV3 1341 aaKnown RBP15.45■□□□□ 0.06
EARS2-207ENST00000563459 CSRNP3Q8WYN3 585 aa15.45■□□□□ 0.06
EARS2-207ENST00000563459 FANCD2Q9BXW9 1451 aa15.45■□□□□ 0.06
EARS2-207ENST00000563459 EEA1Q15075 1411 aa15.45■□□□□ 0.06
EARS2-207ENST00000563459 NESP48681 1621 aa15.44■□□□□ 0.06
EARS2-207ENST00000563459 CCER1Q8TC90 406 aaPredicted RBP15.44■□□□□ 0.06
EARS2-207ENST00000563459 PDS5BQ9NTI5 1447 aa15.42■□□□□ 0.06
EARS2-207ENST00000563459 LAMC3Q9Y6N6 1575 aa15.4■□□□□ 0.06
EARS2-207ENST00000563459 TNIKQ9UKE5 1360 aa15.4■□□□□ 0.06
EARS2-207ENST00000563459 TOP2BQ02880 1626 aa15.4■□□□□ 0.06
EARS2-207ENST00000563459 UBTFP17480 764 aaKnown RBP15.38■□□□□ 0.05
EARS2-207ENST00000563459 CUX1P39880 1505 aa15.37■□□□□ 0.05
EARS2-207ENST00000563459 CEP164Q9UPV0 1460 aa15.37■□□□□ 0.05
EARS2-207ENST00000563459 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
EARS2-207ENST00000563459 BCL11AQ9H165 835 aa15.33■□□□□ 0.04
EARS2-207ENST00000563459 BIVM-ERCC5R4GMW8 1640 aa15.32■□□□□ 0.04
EARS2-207ENST00000563459 DIEXFQ68CQ4 756 aaKnown RBP15.3■□□□□ 0.04
EARS2-207ENST00000563459 KIF27Q86VH2 1401 aa15.3■□□□□ 0.04
EARS2-207ENST00000563459 FGD5Q6ZNL6 1462 aa15.27■□□□□ 0.03
EARS2-207ENST00000563459 RAPGEF2Q9Y4G8 1499 aa15.25■□□□□ 0.03
EARS2-207ENST00000563459 DNMBPQ6XZF7 1577 aa15.24■□□□□ 0.03
EARS2-207ENST00000563459 CUX2O14529 1486 aa15.24■□□□□ 0.03
EARS2-207ENST00000563459 GOLGA3Q08378 1498 aa15.24■□□□□ 0.03
EARS2-207ENST00000563459 TOPBP1Q92547 1522 aa15.24■□□□□ 0.03
EARS2-207ENST00000563459 ERCC6Q03468 1493 aa15.22■□□□□ 0.03
EARS2-207ENST00000563459 CLIP1P30622 1438 aa15.2■□□□□ 0.02
EARS2-207ENST00000563459 KIF21BO75037 1637 aa15.19■□□□□ 0.02
EARS2-207ENST00000563459 HNRNPUL2Q1KMD3 747 aaKnown RBP15.18■□□□□ 0.02
EARS2-207ENST00000563459 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
EARS2-207ENST00000563459 RANGAP1P46060 587 aaPredicted RBP15.17■□□□□ 0.02
EARS2-207ENST00000563459 POLA1P09884 1462 aaPredicted RBP15.17■□□□□ 0.02
EARS2-207ENST00000563459 RAD54L2Q9Y4B4 1467 aa15.16■□□□□ 0.02
EARS2-207ENST00000563459 YTHDC1Q96MU7 727 aaKnown RBP15.16■□□□□ 0.02
EARS2-207ENST00000563459 MRC2Q9UBG0 1479 aa15.15■□□□□ 0.02
EARS2-207ENST00000563459 KIF21AQ7Z4S6 1674 aa15.14■□□□□ 0.01
EARS2-207ENST00000563459 MIER1Q8N108 512 aa15.13■□□□□ 0.01
EARS2-207ENST00000563459 IGF1RP08069 1367 aa15.1■□□□□ 0.01
EARS2-207ENST00000563459 ZNF316A6NFI3 1004 aaPredicted RBP15.1■□□□□ 0.01
EARS2-207ENST00000563459 VPS8Q8N3P4 1428 aa15.09■□□□□ 0.01
EARS2-207ENST00000563459 CARMIL1Q5VZK9 1371 aa15.09■□□□□ 0.01
EARS2-207ENST00000563459 ABCA10Q8WWZ4 1543 aa15.09■□□□□ 0.01
EARS2-207ENST00000563459 TDRD9Q8NDG6 1382 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms