RNA–Protein interactions for RNA: ENST00000563295.1

KIFC3-215, Transcript of kinesin family member C3, humanhuman

TSL 5

Gene KIFC3, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIFC3-215ENST00000563295 NISCHQ9Y2I1 1504 aa24.33■■□□□ 1.49
KIFC3-215ENST00000563295 CCDC180Q9P1Z9 1646 aa21.66■■□□□ 1.06
KIFC3-215ENST00000563295 ABCC9O60706 1549 aa21.4■■□□□ 1.02
KIFC3-215ENST00000563295 RB1CC1Q8TDY2 1594 aa20.51■□□□□ 0.87
KIFC3-215ENST00000563295 DCAF8L2P0C7V8 631 aa20.47■□□□□ 0.87
KIFC3-215ENST00000563295 NACADO15069 1562 aa20.45■□□□□ 0.86
KIFC3-215ENST00000563295 MYO15BQ96JP2 1530 aa20.28■□□□□ 0.84
KIFC3-215ENST00000563295 ZCCHC6Q5VYS8 1495 aaKnown RBP20.21■□□□□ 0.83
KIFC3-215ENST00000563295 DCAF1Q9Y4B6 1507 aa20.12■□□□□ 0.81
KIFC3-215ENST00000563295 PABPN1Q86U42 306 aaKnown RBP eCLIP20.01■□□□□ 0.79
KIFC3-215ENST00000563295 UNC13AQ9UPW8 1703 aa19.96■□□□□ 0.79
KIFC3-215ENST00000563295 BICRAQ9NZM4 1560 aa19.87■□□□□ 0.77
KIFC3-215ENST00000563295 DNAJC5BQ9UF47 199 aa19.83■□□□□ 0.77
KIFC3-215ENST00000563295 SCRIBQ14160 1630 aa19.76■□□□□ 0.75
KIFC3-215ENST00000563295 SHROOM4Q9ULL8 1493 aa19.69■□□□□ 0.74
KIFC3-215ENST00000563295 EIF4G1Q04637 1599 aaKnown RBP19.37■□□□□ 0.69
KIFC3-215ENST00000563295 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.69
KIFC3-215ENST00000563295 CECR2Q9BXF3 1484 aa19.27■□□□□ 0.67
KIFC3-215ENST00000563295 NCAPD3P42695 1498 aa18.9■□□□□ 0.62
KIFC3-215ENST00000563295 SMARCA4P51532 1647 aa18.89■□□□□ 0.61
KIFC3-215ENST00000563295 BAZ1AQ9NRL2 1556 aaPredicted RBP18.86■□□□□ 0.61
KIFC3-215ENST00000563295 ATAD2BQ9ULI0 1458 aa18.86■□□□□ 0.61
KIFC3-215ENST00000563295 SMARCA2P51531 1590 aa18.84■□□□□ 0.61
KIFC3-215ENST00000563295 HMGXB3Q12766 1538 aa18.75■□□□□ 0.59
KIFC3-215ENST00000563295 MROH2BQ7Z745 1585 aa18.73■□□□□ 0.59
KIFC3-215ENST00000563295 PEG3Q9GZU2 1588 aa18.72■□□□□ 0.59
KIFC3-215ENST00000563295 BAZ1BQ9UIG0 1483 aaKnown RBP18.71■□□□□ 0.59
KIFC3-215ENST00000563295 WIZO95785 1651 aa18.5■□□□□ 0.55
KIFC3-215ENST00000563295 ERCC6Q03468 1493 aa18.49■□□□□ 0.55
KIFC3-215ENST00000563295 RSF1Q96T23 1441 aaPredicted RBP18.49■□□□□ 0.55
KIFC3-215ENST00000563295 NESP48681 1621 aa18.45■□□□□ 0.54
KIFC3-215ENST00000563295 LAMC3Q9Y6N6 1575 aa18.39■□□□□ 0.53
KIFC3-215ENST00000563295 CADPSQ9ULU8 1353 aa18.35■□□□□ 0.53
KIFC3-215ENST00000563295 CUX2O14529 1486 aa18.34■□□□□ 0.53
KIFC3-215ENST00000563295 PDS5BQ9NTI5 1447 aa18.32■□□□□ 0.52
KIFC3-215ENST00000563295 TOP2AP11388 1531 aaKnown RBP18.31■□□□□ 0.52
KIFC3-215ENST00000563295 KIF21AQ7Z4S6 1674 aa18.19■□□□□ 0.5
KIFC3-215ENST00000563295 THOC2Q8NI27 1593 aaKnown RBP18.18■□□□□ 0.5
KIFC3-215ENST00000563295 CFTRP13569 1480 aa18.18■□□□□ 0.5
KIFC3-215ENST00000563295 CCDC88BA6NC98 1476 aa18.13■□□□□ 0.49
KIFC3-215ENST00000563295 FANCD2Q9BXW9 1451 aa18.11■□□□□ 0.49
KIFC3-215ENST00000563295 MRC2Q9UBG0 1479 aa18.11■□□□□ 0.49
KIFC3-215ENST00000563295 CEP164Q9UPV0 1460 aa18.1■□□□□ 0.49
KIFC3-215ENST00000563295 WDR62O43379 1518 aa18.04■□□□□ 0.48
KIFC3-215ENST00000563295 DNAJC5Q9H3Z4 198 aa18.03■□□□□ 0.48
KIFC3-215ENST00000563295 PRDM2Q13029 1718 aa17.95■□□□□ 0.46
KIFC3-215ENST00000563295 SUPT5HO00267 1087 aaKnown RBP17.93■□□□□ 0.46
KIFC3-215ENST00000563295 URB2Q14146 1524 aaKnown RBP17.93■□□□□ 0.46
KIFC3-215ENST00000563295 ABCC8Q09428 1581 aa17.82■□□□□ 0.44
KIFC3-215ENST00000563295 TOPBP1Q92547 1522 aa17.79■□□□□ 0.44
KIFC3-215ENST00000563295 DNMBPQ6XZF7 1577 aa17.75■□□□□ 0.43
KIFC3-215ENST00000563295 IFT140Q96RY7 1462 aa17.75■□□□□ 0.43
KIFC3-215ENST00000563295 ZNF608Q9ULD9 1512 aaPredicted RBP17.66■□□□□ 0.42
KIFC3-215ENST00000563295 POLA1P09884 1462 aaPredicted RBP17.63■□□□□ 0.41
KIFC3-215ENST00000563295 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
KIFC3-215ENST00000563295 TARBP1Q13395 1621 aaKnown RBP17.59■□□□□ 0.41
KIFC3-215ENST00000563295 SOGA1O94964 1423 aa17.59■□□□□ 0.41
KIFC3-215ENST00000563295 CUX1P39880 1505 aa17.58■□□□□ 0.41
KIFC3-215ENST00000563295 AQRO60306 1485 aaKnown RBP eCLIP17.56■□□□□ 0.4
KIFC3-215ENST00000563295 FGD5Q6ZNL6 1462 aa17.56■□□□□ 0.4
KIFC3-215ENST00000563295 RAD54L2Q9Y4B4 1467 aa17.56■□□□□ 0.4
KIFC3-215ENST00000563295 EIF4G3O43432 1585 aaKnown RBP17.54■□□□□ 0.4
KIFC3-215ENST00000563295 TDRD9Q8NDG6 1382 aaKnown RBP17.51■□□□□ 0.39
KIFC3-215ENST00000563295 WDR97A6NE52 1622 aa17.45■□□□□ 0.38
KIFC3-215ENST00000563295 WRNQ14191 1432 aaPredicted RBP eCLIP17.44■□□□□ 0.38
KIFC3-215ENST00000563295 FBLN2P98095 1184 aa17.43■□□□□ 0.38
KIFC3-215ENST00000563295 ABCA10Q8WWZ4 1543 aa17.4■□□□□ 0.38
KIFC3-215ENST00000563295 GRIN2BQ13224 1484 aa17.39■□□□□ 0.37
KIFC3-215ENST00000563295 TOP2BQ02880 1626 aa17.39■□□□□ 0.37
KIFC3-215ENST00000563295 GAPVD1Q14C86 1478 aa17.37■□□□□ 0.37
KIFC3-215ENST00000563295 SNAPC4Q5SXM2 1469 aa17.37■□□□□ 0.37
KIFC3-215ENST00000563295 BIVM-ERCC5R4GMW8 1640 aa17.36■□□□□ 0.37
KIFC3-215ENST00000563295 CHMP7Q8WUX9 453 aaPredicted RBP17.36■□□□□ 0.37
KIFC3-215ENST00000563295 MAGI1Q96QZ7 1491 aaPredicted RBP17.36■□□□□ 0.37
KIFC3-215ENST00000563295 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
KIFC3-215ENST00000563295 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
KIFC3-215ENST00000563295 CHD1O14646 1710 aa17.34■□□□□ 0.37
KIFC3-215ENST00000563295 ABCA5Q8WWZ7 1642 aa17.3■□□□□ 0.36
KIFC3-215ENST00000563295 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
KIFC3-215ENST00000563295 PBRM1Q86U86 1689 aa17.26■□□□□ 0.35
KIFC3-215ENST00000563295 RIMBP3CA6NJZ7 1639 aa17.25■□□□□ 0.35
KIFC3-215ENST00000563295 RIMBP3BA6NNM3 1639 aa17.25■□□□□ 0.35
KIFC3-215ENST00000563295 RIMBP3Q9UFD9 1639 aa17.25■□□□□ 0.35
KIFC3-215ENST00000563295 ARHGEF11O15085 1522 aa17.25■□□□□ 0.35
KIFC3-215ENST00000563295 ERICH3Q5RHP9 1530 aa17.18■□□□□ 0.34
KIFC3-215ENST00000563295 CLASP1Q7Z460 1538 aa17.18■□□□□ 0.34
KIFC3-215ENST00000563295 FHAD1B1AJZ9 1412 aa17.17■□□□□ 0.34
KIFC3-215ENST00000563295 CYB5RLQ6IPT4 315 aa17.16■□□□□ 0.34
KIFC3-215ENST00000563295 GRIN2AQ12879 1464 aa17.15■□□□□ 0.34
KIFC3-215ENST00000563295 ADAMTS12P58397 1594 aa17.15■□□□□ 0.34
KIFC3-215ENST00000563295 KIF27Q86VH2 1401 aa17.11■□□□□ 0.33
KIFC3-215ENST00000563295 ARAP1Q96P48 1450 aa17.1■□□□□ 0.33
KIFC3-215ENST00000563295 NUP160Q12769 1436 aa17.09■□□□□ 0.33
KIFC3-215ENST00000563295 IGF1RP08069 1367 aa17.06■□□□□ 0.32
KIFC3-215ENST00000563295 CEP170Q5SW79 1584 aa17.04■□□□□ 0.32
KIFC3-215ENST00000563295 JPH4Q96JJ6 628 aa16.96■□□□□ 0.31
KIFC3-215ENST00000563295 CARMIL1Q5VZK9 1371 aa16.96■□□□□ 0.31
KIFC3-215ENST00000563295 CUL7Q14999 1698 aa16.96■□□□□ 0.31
KIFC3-215ENST00000563295 SHROOM2Q13796 1616 aa16.94■□□□□ 0.3
KIFC3-215ENST00000563295 PRG4Q92954 1404 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms