RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 NISCHQ9Y2I1 1504 aa30.15■■■□□ 2.42
NSMCE1-204ENST00000563273 CCDC180Q9P1Z9 1646 aa26.89■■□□□ 1.9
NSMCE1-204ENST00000563273 ABCC9O60706 1549 aa26.49■■□□□ 1.83
NSMCE1-204ENST00000563273 RB1CC1Q8TDY2 1594 aa25.44■■□□□ 1.66
NSMCE1-204ENST00000563273 NACADO15069 1562 aa25.39■■□□□ 1.65
NSMCE1-204ENST00000563273 MYO15BQ96JP2 1530 aa25.25■■□□□ 1.63
NSMCE1-204ENST00000563273 DCAF8L2P0C7V8 631 aa25.16■■□□□ 1.62
NSMCE1-204ENST00000563273 ZCCHC6Q5VYS8 1495 aaKnown RBP25.08■■□□□ 1.6
NSMCE1-204ENST00000563273 DCAF1Q9Y4B6 1507 aa25.02■■□□□ 1.6
NSMCE1-204ENST00000563273 PABPN1Q86U42 306 aaKnown RBP eCLIP24.71■■□□□ 1.55
NSMCE1-204ENST00000563273 UNC13AQ9UPW8 1703 aa24.69■■□□□ 1.54
NSMCE1-204ENST00000563273 BICRAQ9NZM4 1560 aa24.65■■□□□ 1.54
NSMCE1-204ENST00000563273 DNAJC5BQ9UF47 199 aa24.56■■□□□ 1.52
NSMCE1-204ENST00000563273 SHROOM4Q9ULL8 1493 aa24.53■■□□□ 1.52
NSMCE1-204ENST00000563273 SCRIBQ14160 1630 aa24.43■■□□□ 1.5
NSMCE1-204ENST00000563273 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
NSMCE1-204ENST00000563273 CC2D2AQ9P2K1 1620 aa23.95■■□□□ 1.43
NSMCE1-204ENST00000563273 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
NSMCE1-204ENST00000563273 NCAPD3P42695 1498 aa23.46■■□□□ 1.35
NSMCE1-204ENST00000563273 SMARCA4P51532 1647 aa23.41■■□□□ 1.34
NSMCE1-204ENST00000563273 ATAD2BQ9ULI0 1458 aa23.39■■□□□ 1.34
NSMCE1-204ENST00000563273 BAZ1AQ9NRL2 1556 aaPredicted RBP23.39■■□□□ 1.33
NSMCE1-204ENST00000563273 SMARCA2P51531 1590 aa23.36■■□□□ 1.33
NSMCE1-204ENST00000563273 HMGXB3Q12766 1538 aa23.29■■□□□ 1.32
NSMCE1-204ENST00000563273 PEG3Q9GZU2 1588 aa23.26■■□□□ 1.31
NSMCE1-204ENST00000563273 MROH2BQ7Z745 1585 aa23.19■■□□□ 1.3
NSMCE1-204ENST00000563273 BAZ1BQ9UIG0 1483 aaKnown RBP23.16■■□□□ 1.3
NSMCE1-204ENST00000563273 RSF1Q96T23 1441 aaPredicted RBP22.89■■□□□ 1.25
NSMCE1-204ENST00000563273 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
NSMCE1-204ENST00000563273 WIZO95785 1651 aa22.86■■□□□ 1.25
NSMCE1-204ENST00000563273 NESP48681 1621 aa22.84■■□□□ 1.25
NSMCE1-204ENST00000563273 LAMC3Q9Y6N6 1575 aa22.83■■□□□ 1.25
NSMCE1-204ENST00000563273 CUX2O14529 1486 aa22.81■■□□□ 1.24
NSMCE1-204ENST00000563273 CADPSQ9ULU8 1353 aa22.74■■□□□ 1.23
NSMCE1-204ENST00000563273 PDS5BQ9NTI5 1447 aa22.72■■□□□ 1.23
NSMCE1-204ENST00000563273 TOP2AP11388 1531 aaKnown RBP22.7■■□□□ 1.22
NSMCE1-204ENST00000563273 THOC2Q8NI27 1593 aaKnown RBP22.58■■□□□ 1.2
NSMCE1-204ENST00000563273 CFTRP13569 1480 aa22.56■■□□□ 1.2
NSMCE1-204ENST00000563273 KIF21AQ7Z4S6 1674 aa22.51■■□□□ 1.19
NSMCE1-204ENST00000563273 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
NSMCE1-204ENST00000563273 FANCD2Q9BXW9 1451 aa22.44■■□□□ 1.18
NSMCE1-204ENST00000563273 CEP164Q9UPV0 1460 aa22.44■■□□□ 1.18
NSMCE1-204ENST00000563273 CCDC88BA6NC98 1476 aa22.42■■□□□ 1.18
NSMCE1-204ENST00000563273 WDR62O43379 1518 aa22.4■■□□□ 1.18
NSMCE1-204ENST00000563273 DNAJC5Q9H3Z4 198 aa22.37■■□□□ 1.17
NSMCE1-204ENST00000563273 URB2Q14146 1524 aaKnown RBP22.21■■□□□ 1.15
NSMCE1-204ENST00000563273 PRDM2Q13029 1718 aa22.21■■□□□ 1.15
NSMCE1-204ENST00000563273 ABCC8Q09428 1581 aa22.1■■□□□ 1.13
NSMCE1-204ENST00000563273 TOPBP1Q92547 1522 aa22.05■■□□□ 1.12
NSMCE1-204ENST00000563273 IFT140Q96RY7 1462 aa22.01■■□□□ 1.11
NSMCE1-204ENST00000563273 SUPT5HO00267 1087 aaKnown RBP22■■□□□ 1.11
NSMCE1-204ENST00000563273 DNMBPQ6XZF7 1577 aa21.99■■□□□ 1.11
NSMCE1-204ENST00000563273 ZNF608Q9ULD9 1512 aaPredicted RBP21.86■■□□□ 1.09
NSMCE1-204ENST00000563273 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
NSMCE1-204ENST00000563273 TARBP1Q13395 1621 aaKnown RBP21.8■■□□□ 1.08
NSMCE1-204ENST00000563273 OSCARQ8IYS5 282 aa21.79■■□□□ 1.08
NSMCE1-204ENST00000563273 CUX1P39880 1505 aa21.78■■□□□ 1.08
NSMCE1-204ENST00000563273 SOGA1O94964 1423 aa21.76■■□□□ 1.07
NSMCE1-204ENST00000563273 EIF4G3O43432 1585 aaKnown RBP21.74■■□□□ 1.07
NSMCE1-204ENST00000563273 FGD5Q6ZNL6 1462 aa21.74■■□□□ 1.07
NSMCE1-204ENST00000563273 AQRO60306 1485 aaKnown RBP eCLIP21.71■■□□□ 1.07
NSMCE1-204ENST00000563273 RAD54L2Q9Y4B4 1467 aa21.71■■□□□ 1.07
NSMCE1-204ENST00000563273 WDR97A6NE52 1622 aa21.71■■□□□ 1.07
NSMCE1-204ENST00000563273 TDRD9Q8NDG6 1382 aaKnown RBP21.63■■□□□ 1.05
NSMCE1-204ENST00000563273 WRNQ14191 1432 aaPredicted RBP eCLIP21.57■■□□□ 1.04
NSMCE1-204ENST00000563273 ABCA10Q8WWZ4 1543 aa21.57■■□□□ 1.04
NSMCE1-204ENST00000563273 GRIN2BQ13224 1484 aa21.56■■□□□ 1.04
NSMCE1-204ENST00000563273 MAGI1Q96QZ7 1491 aaPredicted RBP21.54■■□□□ 1.04
NSMCE1-204ENST00000563273 TOP2BQ02880 1626 aa21.53■■□□□ 1.04
NSMCE1-204ENST00000563273 SNAPC4Q5SXM2 1469 aa21.52■■□□□ 1.03
NSMCE1-204ENST00000563273 BIVM-ERCC5R4GMW8 1640 aa21.51■■□□□ 1.03
NSMCE1-204ENST00000563273 GAPVD1Q14C86 1478 aa21.51■■□□□ 1.03
NSMCE1-204ENST00000563273 SYNJ1O43426 1573 aa21.47■■□□□ 1.03
NSMCE1-204ENST00000563273 FBLN2P98095 1184 aa21.46■■□□□ 1.03
NSMCE1-204ENST00000563273 ABCA5Q8WWZ7 1642 aa21.46■■□□□ 1.03
NSMCE1-204ENST00000563273 SYNJ2O15056 1496 aa21.45■■□□□ 1.02
NSMCE1-204ENST00000563273 CHD1O14646 1710 aa21.44■■□□□ 1.02
NSMCE1-204ENST00000563273 CHMP7Q8WUX9 453 aaPredicted RBP21.43■■□□□ 1.02
NSMCE1-204ENST00000563273 TRIM41Q8WV44 630 aa21.41■■□□□ 1.02
NSMCE1-204ENST00000563273 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
NSMCE1-204ENST00000563273 RIMBP3CA6NJZ7 1639 aa21.38■■□□□ 1.01
NSMCE1-204ENST00000563273 RIMBP3BA6NNM3 1639 aa21.38■■□□□ 1.01
NSMCE1-204ENST00000563273 RIMBP3Q9UFD9 1639 aa21.38■■□□□ 1.01
NSMCE1-204ENST00000563273 PBRM1Q86U86 1689 aa21.36■■□□□ 1.01
NSMCE1-204ENST00000563273 CLASP1Q7Z460 1538 aa21.34■■□□□ 1.01
NSMCE1-204ENST00000563273 ERICH3Q5RHP9 1530 aa21.31■■□□□ 1
NSMCE1-204ENST00000563273 FHAD1B1AJZ9 1412 aa21.28■■□□□ 1
NSMCE1-204ENST00000563273 ADAMTS12P58397 1594 aa21.27■□□□□ 0.99
NSMCE1-204ENST00000563273 GRIN2AQ12879 1464 aa21.26■□□□□ 0.99
NSMCE1-204ENST00000563273 NUP160Q12769 1436 aa21.21■□□□□ 0.99
NSMCE1-204ENST00000563273 ARAP1Q96P48 1450 aa21.21■□□□□ 0.99
NSMCE1-204ENST00000563273 CYB5RLQ6IPT4 315 aa21.19■□□□□ 0.98
NSMCE1-204ENST00000563273 KIF27Q86VH2 1401 aa21.16■□□□□ 0.98
NSMCE1-204ENST00000563273 CEP170Q5SW79 1584 aa21.12■□□□□ 0.97
NSMCE1-204ENST00000563273 IGF1RP08069 1367 aa21.11■□□□□ 0.97
NSMCE1-204ENST00000563273 SHROOM2Q13796 1616 aa21.03■□□□□ 0.96
NSMCE1-204ENST00000563273 CUL7Q14999 1698 aa21.02■□□□□ 0.95
NSMCE1-204ENST00000563273 CARMIL1Q5VZK9 1371 aa20.97■□□□□ 0.95
NSMCE1-204ENST00000563273 JPH4Q96JJ6 628 aa20.96■□□□□ 0.95
NSMCE1-204ENST00000563273 RUSC2Q8N2Y8 1516 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms