RNA–Protein interactions for RNA: ENST00000563029.5

ECI1-204, Transcript of enoyl-CoA delta isomerase 1, humanhuman

TSL 2

Gene ECI1, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECI1-204ENST00000563029 NISCHQ9Y2I1 1504 aa63.88■■■■■ 7.82
ECI1-204ENST00000563029 ABCC9O60706 1549 aa57.61■■■■■ 6.81
ECI1-204ENST00000563029 CCDC180Q9P1Z9 1646 aa57.22■■■■■ 6.75
ECI1-204ENST00000563029 RB1CC1Q8TDY2 1594 aa54.63■■■■■ 6.34
ECI1-204ENST00000563029 DNAJC5BQ9UF47 199 aa54.41■■■■■ 6.3
ECI1-204ENST00000563029 NACADO15069 1562 aa54.24■■■■■ 6.27
ECI1-204ENST00000563029 DCAF8L2P0C7V8 631 aa54.13■■■■■ 6.26
ECI1-204ENST00000563029 PABPN1Q86U42 306 aaKnown RBP eCLIP53.73■■■■■ 6.19
ECI1-204ENST00000563029 MYO15BQ96JP2 1530 aa53.44■■■■■ 6.15
ECI1-204ENST00000563029 UNC13AQ9UPW8 1703 aa53.37■■■■■ 6.13
ECI1-204ENST00000563029 BICRAQ9NZM4 1560 aa53.15■■■■■ 6.1
ECI1-204ENST00000563029 ZCCHC6Q5VYS8 1495 aaKnown RBP52.88■■■■■ 6.06
ECI1-204ENST00000563029 DCAF1Q9Y4B6 1507 aa52.7■■■■■ 6.03
ECI1-204ENST00000563029 SHROOM4Q9ULL8 1493 aa52.27■■■■■ 5.96
ECI1-204ENST00000563029 SCRIBQ14160 1630 aa52.24■■■■■ 5.95
ECI1-204ENST00000563029 CC2D2AQ9P2K1 1620 aa51.97■■■■■ 5.91
ECI1-204ENST00000563029 CECR2Q9BXF3 1484 aa51.9■■■■■ 5.9
ECI1-204ENST00000563029 EIF4G1Q04637 1599 aaKnown RBP51.82■■■■■ 5.89
ECI1-204ENST00000563029 NCAPD3P42695 1498 aa50.18■■■■■ 5.62
ECI1-204ENST00000563029 ATAD2BQ9ULI0 1458 aa50.01■■■■■ 5.6
ECI1-204ENST00000563029 DNAJC5Q9H3Z4 198 aa49.99■■■■■ 5.59
ECI1-204ENST00000563029 SMARCA4P51532 1647 aa49.81■■■■■ 5.56
ECI1-204ENST00000563029 SMARCA2P51531 1590 aa49.73■■■■■ 5.55
ECI1-204ENST00000563029 ERCC6Q03468 1493 aa49.68■■■■■ 5.54
ECI1-204ENST00000563029 HMGXB3Q12766 1538 aa49.67■■■■■ 5.54
ECI1-204ENST00000563029 CUX2O14529 1486 aa49.64■■■■■ 5.54
ECI1-204ENST00000563029 BAZ1AQ9NRL2 1556 aaPredicted RBP49.53■■■■■ 5.52
ECI1-204ENST00000563029 NESP48681 1621 aa49.47■■■■■ 5.51
ECI1-204ENST00000563029 BAZ1BQ9UIG0 1483 aaKnown RBP49.44■■■■■ 5.5
ECI1-204ENST00000563029 PEG3Q9GZU2 1588 aa49.33■■■■■ 5.49
ECI1-204ENST00000563029 MROH2BQ7Z745 1585 aa49.26■■■■■ 5.48
ECI1-204ENST00000563029 LAMC3Q9Y6N6 1575 aa48.95■■■■■ 5.43
ECI1-204ENST00000563029 THOC2Q8NI27 1593 aaKnown RBP48.88■■■■■ 5.42
ECI1-204ENST00000563029 PDS5BQ9NTI5 1447 aa48.75■■■■■ 5.39
ECI1-204ENST00000563029 KIF21AQ7Z4S6 1674 aa48.67■■■■■ 5.38
ECI1-204ENST00000563029 CADPSQ9ULU8 1353 aa48.66■■■■■ 5.38
ECI1-204ENST00000563029 WIZO95785 1651 aa48.6■■■■■ 5.37
ECI1-204ENST00000563029 MRC2Q9UBG0 1479 aa48.32■■■■■ 5.33
ECI1-204ENST00000563029 RSF1Q96T23 1441 aaPredicted RBP48.21■■■■■ 5.31
ECI1-204ENST00000563029 WDR62O43379 1518 aa48.19■■■■■ 5.31
ECI1-204ENST00000563029 CEP164Q9UPV0 1460 aa48.08■■■■■ 5.29
ECI1-204ENST00000563029 FANCD2Q9BXW9 1451 aa48.06■■■■■ 5.28
ECI1-204ENST00000563029 CFTRP13569 1480 aa48.04■■■■■ 5.28
ECI1-204ENST00000563029 TOP2AP11388 1531 aaKnown RBP47.94■■■■■ 5.26
ECI1-204ENST00000563029 TRIM41Q8WV44 630 aa47.71■■■■■ 5.23
ECI1-204ENST00000563029 URB2Q14146 1524 aaKnown RBP47.71■■■■■ 5.23
ECI1-204ENST00000563029 CCDC88BA6NC98 1476 aa47.52■■■■■ 5.2
ECI1-204ENST00000563029 OSCARQ8IYS5 282 aa47.47■■■■■ 5.19
ECI1-204ENST00000563029 PRDM2Q13029 1718 aa47.3■■■■■ 5.16
ECI1-204ENST00000563029 ZNF608Q9ULD9 1512 aaPredicted RBP47.17■■■■■ 5.14
ECI1-204ENST00000563029 IFT140Q96RY7 1462 aa47.14■■■■■ 5.14
ECI1-204ENST00000563029 TOPBP1Q92547 1522 aa47.13■■■■■ 5.14
ECI1-204ENST00000563029 ABCC8Q09428 1581 aa46.95■■■■■ 5.11
ECI1-204ENST00000563029 DNMBPQ6XZF7 1577 aa46.87■■■■■ 5.09
ECI1-204ENST00000563029 EIF4G3O43432 1585 aaKnown RBP46.76■■■■■ 5.08
ECI1-204ENST00000563029 RIMBP3CA6NJZ7 1639 aa46.76■■■■■ 5.08
ECI1-204ENST00000563029 RIMBP3BA6NNM3 1639 aa46.76■■■■■ 5.08
ECI1-204ENST00000563029 RIMBP3Q9UFD9 1639 aa46.76■■■■■ 5.08
ECI1-204ENST00000563029 AQRO60306 1485 aaKnown RBP eCLIP46.75■■■■■ 5.078e-7■■■□□ 17.1
ECI1-204ENST00000563029 TARBP1Q13395 1621 aaKnown RBP46.69■■■■■ 5.07
ECI1-204ENST00000563029 POLA1P09884 1462 aaPredicted RBP46.64■■■■■ 5.06
ECI1-204ENST00000563029 ARHGEF11O15085 1522 aa46.63■■■■■ 5.05
ECI1-204ENST00000563029 RAD54L2Q9Y4B4 1467 aa46.54■■■■■ 5.04
ECI1-204ENST00000563029 SOGA1O94964 1423 aa46.47■■■■■ 5.03
ECI1-204ENST00000563029 FBLN2P98095 1184 aa46.47■■■■■ 5.03
ECI1-204ENST00000563029 TDRD9Q8NDG6 1382 aaKnown RBP46.45■■■■■ 5.03
ECI1-204ENST00000563029 CYB5RLQ6IPT4 315 aa46.42■■■■■ 5.02
ECI1-204ENST00000563029 CHD1O14646 1710 aa46.42■■■■■ 5.02
ECI1-204ENST00000563029 FGD5Q6ZNL6 1462 aa46.31■■■■■ 5
ECI1-204ENST00000563029 CUX1P39880 1505 aa46.27■■■■■ 5
ECI1-204ENST00000563029 SNAPC4Q5SXM2 1469 aa46.19■■■■■ 4.98
ECI1-204ENST00000563029 ARAP1Q96P48 1450 aa46.19■■■■■ 4.98
ECI1-204ENST00000563029 WDR97A6NE52 1622 aa46.09■■■■■ 4.97
ECI1-204ENST00000563029 CHMP7Q8WUX9 453 aaPredicted RBP46.08■■■■■ 4.97
ECI1-204ENST00000563029 GRIN2BQ13224 1484 aa46.02■■■■■ 4.96
ECI1-204ENST00000563029 MAGI1Q96QZ7 1491 aaPredicted RBP46■■■■■ 4.95
ECI1-204ENST00000563029 SUPT5HO00267 1087 aaKnown RBP46■■■■■ 4.95
ECI1-204ENST00000563029 CLASP1Q7Z460 1538 aa45.97■■■■■ 4.95
ECI1-204ENST00000563029 TRHP20396 242 aaPredicted RBP45.91■■■■■ 4.94
ECI1-204ENST00000563029 SYNJ2O15056 1496 aa45.88■■■■■ 4.94
ECI1-204ENST00000563029 SYNJ1O43426 1573 aa45.86■■■■■ 4.93
ECI1-204ENST00000563029 GAPVD1Q14C86 1478 aa45.86■■■■■ 4.93
ECI1-204ENST00000563029 ABCA10Q8WWZ4 1543 aa45.77■■■■■ 4.92
ECI1-204ENST00000563029 PBRM1Q86U86 1689 aa45.71■■■■■ 4.91
ECI1-204ENST00000563029 ABCA5Q8WWZ7 1642 aa45.66■■■■■ 4.9
ECI1-204ENST00000563029 WRNQ14191 1432 aaPredicted RBP eCLIP45.56■■■■■ 4.88
ECI1-204ENST00000563029 GRIN2AQ12879 1464 aa45.43■■■■■ 4.86
ECI1-204ENST00000563029 TOP2BQ02880 1626 aa45.41■■■■■ 4.86
ECI1-204ENST00000563029 BIVM-ERCC5R4GMW8 1640 aa45.37■■■■■ 4.85
ECI1-204ENST00000563029 ADAMTS12P58397 1594 aa45.33■■■■■ 4.85
ECI1-204ENST00000563029 NUP160Q12769 1436 aa45.32■■■■■ 4.85
ECI1-204ENST00000563029 ERCC6L2Q5T890 1561 aa45.32■■■■■ 4.85
ECI1-204ENST00000563029 CEP170Q5SW79 1584 aa45.28■■■■■ 4.84
ECI1-204ENST00000563029 FHAD1B1AJZ9 1412 aa45.26■■■■■ 4.84
ECI1-204ENST00000563029 ERICH3Q5RHP9 1530 aa45.16■■■■■ 4.82
ECI1-204ENST00000563029 SHROOM2Q13796 1616 aa45.06■■■■■ 4.8
ECI1-204ENST00000563029 JPH4Q96JJ6 628 aa44.95■■■■■ 4.79
ECI1-204ENST00000563029 PRG4Q92954 1404 aaPredicted RBP44.92■■■■■ 4.78
ECI1-204ENST00000563029 IGF1RP08069 1367 aa44.7■■■■■ 4.75
ECI1-204ENST00000563029 RUSC2Q8N2Y8 1516 aa44.68■■■■■ 4.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms