RNA–Protein interactions for RNA: ENST00000562792.1

TRAPPC2L-204, Transcript of trafficking protein particle complex 2 like, humanhuman

TSL 4

Gene TRAPPC2L, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2L-204ENST00000562792 NISCHQ9Y2I1 1504 aa35.86■■■■□ 3.33
TRAPPC2L-204ENST00000562792 ABCC9O60706 1549 aa32.53■■■□□ 2.8
TRAPPC2L-204ENST00000562792 CCDC180Q9P1Z9 1646 aa32.04■■■□□ 2.72
TRAPPC2L-204ENST00000562792 DNAJC5BQ9UF47 199 aa30.93■■■□□ 2.54
TRAPPC2L-204ENST00000562792 RB1CC1Q8TDY2 1594 aa30.63■■■□□ 2.49
TRAPPC2L-204ENST00000562792 DCAF8L2P0C7V8 631 aa30.45■■■□□ 2.47
TRAPPC2L-204ENST00000562792 NACADO15069 1562 aa30.39■■■□□ 2.46
TRAPPC2L-204ENST00000562792 PABPN1Q86U42 306 aaKnown RBP eCLIP30.38■■■□□ 2.45
TRAPPC2L-204ENST00000562792 UNC13AQ9UPW8 1703 aa30.07■■■□□ 2.4
TRAPPC2L-204ENST00000562792 BICRAQ9NZM4 1560 aa29.99■■■□□ 2.39
TRAPPC2L-204ENST00000562792 MYO15BQ96JP2 1530 aa29.88■■■□□ 2.37
TRAPPC2L-204ENST00000562792 ZCCHC6Q5VYS8 1495 aaKnown RBP29.67■■■□□ 2.34
TRAPPC2L-204ENST00000562792 DCAF1Q9Y4B6 1507 aa29.47■■■□□ 2.31
TRAPPC2L-204ENST00000562792 SCRIBQ14160 1630 aa29.42■■■□□ 2.3
TRAPPC2L-204ENST00000562792 CC2D2AQ9P2K1 1620 aa29.29■■■□□ 2.28
TRAPPC2L-204ENST00000562792 CECR2Q9BXF3 1484 aa29.24■■■□□ 2.27
TRAPPC2L-204ENST00000562792 SHROOM4Q9ULL8 1493 aa29.21■■■□□ 2.27
TRAPPC2L-204ENST00000562792 EIF4G1Q04637 1599 aaKnown RBP29.17■■■□□ 2.26
TRAPPC2L-204ENST00000562792 DNAJC5Q9H3Z4 198 aa28.27■■■□□ 2.12
TRAPPC2L-204ENST00000562792 NCAPD3P42695 1498 aa28.17■■■□□ 2.1
TRAPPC2L-204ENST00000562792 ATAD2BQ9ULI0 1458 aa28.12■■■□□ 2.09
TRAPPC2L-204ENST00000562792 SMARCA4P51532 1647 aa27.98■■■□□ 2.07
TRAPPC2L-204ENST00000562792 NESP48681 1621 aa27.97■■■□□ 2.07
TRAPPC2L-204ENST00000562792 ERCC6Q03468 1493 aa27.93■■■□□ 2.06
TRAPPC2L-204ENST00000562792 CUX2O14529 1486 aa27.89■■■□□ 2.05
TRAPPC2L-204ENST00000562792 HMGXB3Q12766 1538 aa27.85■■■□□ 2.05
TRAPPC2L-204ENST00000562792 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
TRAPPC2L-204ENST00000562792 BAZ1BQ9UIG0 1483 aaKnown RBP27.75■■■□□ 2.03
TRAPPC2L-204ENST00000562792 MROH2BQ7Z745 1585 aa27.74■■■□□ 2.03
TRAPPC2L-204ENST00000562792 BAZ1AQ9NRL2 1556 aaPredicted RBP27.73■■■□□ 2.03
TRAPPC2L-204ENST00000562792 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
TRAPPC2L-204ENST00000562792 THOC2Q8NI27 1593 aaKnown RBP27.56■■■□□ 2
TRAPPC2L-204ENST00000562792 LAMC3Q9Y6N6 1575 aa27.45■■□□□ 1.99
TRAPPC2L-204ENST00000562792 KIF21AQ7Z4S6 1674 aa27.43■■□□□ 1.98
TRAPPC2L-204ENST00000562792 WIZO95785 1651 aa27.36■■□□□ 1.97
TRAPPC2L-204ENST00000562792 CADPSQ9ULU8 1353 aa27.33■■□□□ 1.97
TRAPPC2L-204ENST00000562792 PDS5BQ9NTI5 1447 aa27.32■■□□□ 1.96
TRAPPC2L-204ENST00000562792 MRC2Q9UBG0 1479 aa27.16■■□□□ 1.94
TRAPPC2L-204ENST00000562792 WDR62O43379 1518 aa27.1■■□□□ 1.93
TRAPPC2L-204ENST00000562792 RSF1Q96T23 1441 aaPredicted RBP27.09■■□□□ 1.93
TRAPPC2L-204ENST00000562792 FANCD2Q9BXW9 1451 aa27.01■■□□□ 1.91
TRAPPC2L-204ENST00000562792 TRIM41Q8WV44 630 aa27.01■■□□□ 1.91
TRAPPC2L-204ENST00000562792 CEP164Q9UPV0 1460 aa26.98■■□□□ 1.91
TRAPPC2L-204ENST00000562792 CFTRP13569 1480 aa26.97■■□□□ 1.91
TRAPPC2L-204ENST00000562792 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
TRAPPC2L-204ENST00000562792 TOP2AP11388 1531 aaKnown RBP26.88■■□□□ 1.89
TRAPPC2L-204ENST00000562792 CCDC88BA6NC98 1476 aa26.71■■□□□ 1.87
TRAPPC2L-204ENST00000562792 OSCARQ8IYS5 282 aa26.68■■□□□ 1.86
TRAPPC2L-204ENST00000562792 ZNF608Q9ULD9 1512 aaPredicted RBP26.65■■□□□ 1.86
TRAPPC2L-204ENST00000562792 TOPBP1Q92547 1522 aa26.5■■□□□ 1.83
TRAPPC2L-204ENST00000562792 PRDM2Q13029 1718 aa26.47■■□□□ 1.83
TRAPPC2L-204ENST00000562792 IFT140Q96RY7 1462 aa26.45■■□□□ 1.82
TRAPPC2L-204ENST00000562792 RIMBP3CA6NJZ7 1639 aa26.39■■□□□ 1.81
TRAPPC2L-204ENST00000562792 RIMBP3BA6NNM3 1639 aa26.39■■□□□ 1.81
TRAPPC2L-204ENST00000562792 RIMBP3Q9UFD9 1639 aa26.39■■□□□ 1.81
TRAPPC2L-204ENST00000562792 AQRO60306 1485 aaKnown RBP eCLIP26.36■■□□□ 1.817e-7■■■□□ 15.5
TRAPPC2L-204ENST00000562792 EIF4G3O43432 1585 aaKnown RBP26.32■■□□□ 1.8
TRAPPC2L-204ENST00000562792 DNMBPQ6XZF7 1577 aa26.3■■□□□ 1.8
TRAPPC2L-204ENST00000562792 ARHGEF11O15085 1522 aa26.29■■□□□ 1.8
TRAPPC2L-204ENST00000562792 TARBP1Q13395 1621 aaKnown RBP26.28■■□□□ 1.8
TRAPPC2L-204ENST00000562792 RAD54L2Q9Y4B4 1467 aa26.25■■□□□ 1.79
TRAPPC2L-204ENST00000562792 POLA1P09884 1462 aaPredicted RBP26.23■■□□□ 1.79
TRAPPC2L-204ENST00000562792 ABCC8Q09428 1581 aa26.21■■□□□ 1.79
TRAPPC2L-204ENST00000562792 CYB5RLQ6IPT4 315 aa26.18■■□□□ 1.78
TRAPPC2L-204ENST00000562792 TDRD9Q8NDG6 1382 aaKnown RBP26.18■■□□□ 1.78
TRAPPC2L-204ENST00000562792 FBLN2P98095 1184 aa26.15■■□□□ 1.78
TRAPPC2L-204ENST00000562792 CHD1O14646 1710 aa26.14■■□□□ 1.78
TRAPPC2L-204ENST00000562792 SOGA1O94964 1423 aa26.09■■□□□ 1.77
TRAPPC2L-204ENST00000562792 ARAP1Q96P48 1450 aa26.08■■□□□ 1.77
TRAPPC2L-204ENST00000562792 CUX1P39880 1505 aa26.04■■□□□ 1.76
TRAPPC2L-204ENST00000562792 FGD5Q6ZNL6 1462 aa26.04■■□□□ 1.76
TRAPPC2L-204ENST00000562792 SNAPC4Q5SXM2 1469 aa25.99■■□□□ 1.75
TRAPPC2L-204ENST00000562792 CLASP1Q7Z460 1538 aa25.88■■□□□ 1.73
TRAPPC2L-204ENST00000562792 TRHP20396 242 aaPredicted RBP25.87■■□□□ 1.73
TRAPPC2L-204ENST00000562792 CHMP7Q8WUX9 453 aaPredicted RBP25.86■■□□□ 1.73
TRAPPC2L-204ENST00000562792 GRIN2BQ13224 1484 aa25.81■■□□□ 1.72
TRAPPC2L-204ENST00000562792 SUPT5HO00267 1087 aaKnown RBP25.81■■□□□ 1.72
TRAPPC2L-204ENST00000562792 MAGI1Q96QZ7 1491 aaPredicted RBP25.79■■□□□ 1.72
TRAPPC2L-204ENST00000562792 WDR97A6NE52 1622 aa25.78■■□□□ 1.72
TRAPPC2L-204ENST00000562792 SYNJ2O15056 1496 aa25.76■■□□□ 1.71
TRAPPC2L-204ENST00000562792 GAPVD1Q14C86 1478 aa25.74■■□□□ 1.71
TRAPPC2L-204ENST00000562792 SYNJ1O43426 1573 aa25.7■■□□□ 1.71
TRAPPC2L-204ENST00000562792 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
TRAPPC2L-204ENST00000562792 PBRM1Q86U86 1689 aa25.67■■□□□ 1.7
TRAPPC2L-204ENST00000562792 ABCA5Q8WWZ7 1642 aa25.65■■□□□ 1.7
TRAPPC2L-204ENST00000562792 ERCC6L2Q5T890 1561 aa25.65■■□□□ 1.7
TRAPPC2L-204ENST00000562792 GRIN2AQ12879 1464 aa25.52■■□□□ 1.68
TRAPPC2L-204ENST00000562792 CEP170Q5SW79 1584 aa25.51■■□□□ 1.67
TRAPPC2L-204ENST00000562792 WRNQ14191 1432 aaPredicted RBP eCLIP25.5■■□□□ 1.67
TRAPPC2L-204ENST00000562792 ADAMTS12P58397 1594 aa25.48■■□□□ 1.67
TRAPPC2L-204ENST00000562792 NUP160Q12769 1436 aa25.46■■□□□ 1.67
TRAPPC2L-204ENST00000562792 TOP2BQ02880 1626 aa25.45■■□□□ 1.66
TRAPPC2L-204ENST00000562792 BIVM-ERCC5R4GMW8 1640 aa25.43■■□□□ 1.66
TRAPPC2L-204ENST00000562792 FHAD1B1AJZ9 1412 aa25.37■■□□□ 1.65
TRAPPC2L-204ENST00000562792 SHROOM2Q13796 1616 aa25.33■■□□□ 1.65
TRAPPC2L-204ENST00000562792 ERICH3Q5RHP9 1530 aa25.28■■□□□ 1.64
TRAPPC2L-204ENST00000562792 PRG4Q92954 1404 aaPredicted RBP25.26■■□□□ 1.63
TRAPPC2L-204ENST00000562792 JPH4Q96JJ6 628 aa25.24■■□□□ 1.63
TRAPPC2L-204ENST00000562792 AEBP2Q6ZN18 517 aaPredicted RBP25.12■■□□□ 1.61
TRAPPC2L-204ENST00000562792 IGF1RP08069 1367 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms