RNA–Protein interactions for RNA: ENST00000562644.1

AC133539.1-201, humanhuman

TSL 5 BASIC

Gene AC133539.1, Length 420 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC133539.1-201ENST00000562644 NISCHQ9Y2I1 1504 aa30.19■■■□□ 2.42
AC133539.1-201ENST00000562644 CCDC180Q9P1Z9 1646 aa26.93■■□□□ 1.9
AC133539.1-201ENST00000562644 ABCC9O60706 1549 aa26.58■■□□□ 1.85
AC133539.1-201ENST00000562644 RB1CC1Q8TDY2 1594 aa25.46■■□□□ 1.67
AC133539.1-201ENST00000562644 DCAF8L2P0C7V8 631 aa25.45■■□□□ 1.66
AC133539.1-201ENST00000562644 NACADO15069 1562 aa25.35■■□□□ 1.65
AC133539.1-201ENST00000562644 ZCCHC6Q5VYS8 1495 aaKnown RBP25.12■■□□□ 1.61
AC133539.1-201ENST00000562644 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
AC133539.1-201ENST00000562644 DCAF1Q9Y4B6 1507 aa24.91■■□□□ 1.58
AC133539.1-201ENST00000562644 UNC13AQ9UPW8 1703 aa24.85■■□□□ 1.57
AC133539.1-201ENST00000562644 PABPN1Q86U42 306 aaKnown RBP eCLIP24.8■■□□□ 1.56
AC133539.1-201ENST00000562644 SCRIBQ14160 1630 aa24.64■■□□□ 1.53
AC133539.1-201ENST00000562644 BICRAQ9NZM4 1560 aa24.63■■□□□ 1.53
AC133539.1-201ENST00000562644 DNAJC5BQ9UF47 199 aa24.44■■□□□ 1.5
AC133539.1-201ENST00000562644 SHROOM4Q9ULL8 1493 aa24.34■■□□□ 1.49
AC133539.1-201ENST00000562644 EIF4G1Q04637 1599 aaKnown RBP24.03■■□□□ 1.44
AC133539.1-201ENST00000562644 CC2D2AQ9P2K1 1620 aa23.99■■□□□ 1.43
AC133539.1-201ENST00000562644 CECR2Q9BXF3 1484 aa23.87■■□□□ 1.41
AC133539.1-201ENST00000562644 SMARCA4P51532 1647 aa23.49■■□□□ 1.35
AC133539.1-201ENST00000562644 BAZ1AQ9NRL2 1556 aaPredicted RBP23.44■■□□□ 1.34
AC133539.1-201ENST00000562644 ATAD2BQ9ULI0 1458 aa23.37■■□□□ 1.33
AC133539.1-201ENST00000562644 SMARCA2P51531 1590 aa23.37■■□□□ 1.33
AC133539.1-201ENST00000562644 NCAPD3P42695 1498 aa23.36■■□□□ 1.33
AC133539.1-201ENST00000562644 MROH2BQ7Z745 1585 aa23.28■■□□□ 1.32
AC133539.1-201ENST00000562644 HMGXB3Q12766 1538 aa23.26■■□□□ 1.31
AC133539.1-201ENST00000562644 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
AC133539.1-201ENST00000562644 PEG3Q9GZU2 1588 aa23.18■■□□□ 1.3
AC133539.1-201ENST00000562644 WIZO95785 1651 aa23.05■■□□□ 1.28
AC133539.1-201ENST00000562644 ERCC6Q03468 1493 aa22.96■■□□□ 1.27
AC133539.1-201ENST00000562644 RSF1Q96T23 1441 aaPredicted RBP22.93■■□□□ 1.26
AC133539.1-201ENST00000562644 NESP48681 1621 aa22.92■■□□□ 1.26
AC133539.1-201ENST00000562644 LAMC3Q9Y6N6 1575 aa22.81■■□□□ 1.24
AC133539.1-201ENST00000562644 TOP2AP11388 1531 aaKnown RBP22.79■■□□□ 1.24
AC133539.1-201ENST00000562644 CADPSQ9ULU8 1353 aa22.7■■□□□ 1.22
AC133539.1-201ENST00000562644 CUX2O14529 1486 aa22.68■■□□□ 1.22
AC133539.1-201ENST00000562644 PDS5BQ9NTI5 1447 aa22.68■■□□□ 1.22
AC133539.1-201ENST00000562644 KIF21AQ7Z4S6 1674 aa22.66■■□□□ 1.22
AC133539.1-201ENST00000562644 THOC2Q8NI27 1593 aaKnown RBP22.59■■□□□ 1.21
AC133539.1-201ENST00000562644 CFTRP13569 1480 aa22.51■■□□□ 1.19
AC133539.1-201ENST00000562644 CCDC88BA6NC98 1476 aa22.5■■□□□ 1.19
AC133539.1-201ENST00000562644 CEP164Q9UPV0 1460 aa22.49■■□□□ 1.19
AC133539.1-201ENST00000562644 FANCD2Q9BXW9 1451 aa22.48■■□□□ 1.19
AC133539.1-201ENST00000562644 MRC2Q9UBG0 1479 aa22.47■■□□□ 1.19
AC133539.1-201ENST00000562644 PRDM2Q13029 1718 aa22.37■■□□□ 1.17
AC133539.1-201ENST00000562644 WDR62O43379 1518 aa22.37■■□□□ 1.17
AC133539.1-201ENST00000562644 SUPT5HO00267 1087 aaKnown RBP22.36■■□□□ 1.17
AC133539.1-201ENST00000562644 URB2Q14146 1524 aaKnown RBP22.25■■□□□ 1.15
AC133539.1-201ENST00000562644 DNAJC5Q9H3Z4 198 aa22.14■■□□□ 1.13
AC133539.1-201ENST00000562644 TOPBP1Q92547 1522 aa22.09■■□□□ 1.13
AC133539.1-201ENST00000562644 ABCC8Q09428 1581 aa22.06■■□□□ 1.12
AC133539.1-201ENST00000562644 DNMBPQ6XZF7 1577 aa22.06■■□□□ 1.12
AC133539.1-201ENST00000562644 IFT140Q96RY7 1462 aa21.99■■□□□ 1.11
AC133539.1-201ENST00000562644 ZNF608Q9ULD9 1512 aaPredicted RBP21.9■■□□□ 1.1
AC133539.1-201ENST00000562644 POLA1P09884 1462 aaPredicted RBP21.89■■□□□ 1.09
AC133539.1-201ENST00000562644 CUX1P39880 1505 aa21.85■■□□□ 1.09
AC133539.1-201ENST00000562644 EIF4G3O43432 1585 aaKnown RBP21.85■■□□□ 1.09
AC133539.1-201ENST00000562644 TARBP1Q13395 1621 aaKnown RBP21.84■■□□□ 1.09
AC133539.1-201ENST00000562644 FGD5Q6ZNL6 1462 aa21.83■■□□□ 1.09
AC133539.1-201ENST00000562644 RAD54L2Q9Y4B4 1467 aa21.82■■□□□ 1.08
AC133539.1-201ENST00000562644 SOGA1O94964 1423 aa21.8■■□□□ 1.08
AC133539.1-201ENST00000562644 AQRO60306 1485 aaKnown RBP eCLIP21.77■■□□□ 1.08
AC133539.1-201ENST00000562644 OSCARQ8IYS5 282 aa21.73■■□□□ 1.07
AC133539.1-201ENST00000562644 TDRD9Q8NDG6 1382 aaKnown RBP21.72■■□□□ 1.07
AC133539.1-201ENST00000562644 WRNQ14191 1432 aaPredicted RBP eCLIP21.67■■□□□ 1.06
AC133539.1-201ENST00000562644 WDR97A6NE52 1622 aa21.65■■□□□ 1.06
AC133539.1-201ENST00000562644 FBLN2P98095 1184 aa21.64■■□□□ 1.05
AC133539.1-201ENST00000562644 SYNJ1O43426 1573 aa21.63■■□□□ 1.05
AC133539.1-201ENST00000562644 TOP2BQ02880 1626 aa21.62■■□□□ 1.05
AC133539.1-201ENST00000562644 BIVM-ERCC5R4GMW8 1640 aa21.62■■□□□ 1.05
AC133539.1-201ENST00000562644 CHD1O14646 1710 aa21.6■■□□□ 1.05
AC133539.1-201ENST00000562644 SNAPC4Q5SXM2 1469 aa21.59■■□□□ 1.05
AC133539.1-201ENST00000562644 GRIN2BQ13224 1484 aa21.58■■□□□ 1.04
AC133539.1-201ENST00000562644 ABCA10Q8WWZ4 1543 aa21.57■■□□□ 1.04
AC133539.1-201ENST00000562644 GAPVD1Q14C86 1478 aa21.56■■□□□ 1.04
AC133539.1-201ENST00000562644 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
AC133539.1-201ENST00000562644 ABCA5Q8WWZ7 1642 aa21.52■■□□□ 1.04
AC133539.1-201ENST00000562644 MAGI1Q96QZ7 1491 aaPredicted RBP21.52■■□□□ 1.03
AC133539.1-201ENST00000562644 TRIM41Q8WV44 630 aa21.51■■□□□ 1.03
AC133539.1-201ENST00000562644 CHMP7Q8WUX9 453 aaPredicted RBP21.5■■□□□ 1.03
AC133539.1-201ENST00000562644 SYNJ2O15056 1496 aa21.45■■□□□ 1.02
AC133539.1-201ENST00000562644 RIMBP3CA6NJZ7 1639 aa21.42■■□□□ 1.02
AC133539.1-201ENST00000562644 RIMBP3BA6NNM3 1639 aa21.42■■□□□ 1.02
AC133539.1-201ENST00000562644 RIMBP3Q9UFD9 1639 aa21.42■■□□□ 1.02
AC133539.1-201ENST00000562644 ARHGEF11O15085 1522 aa21.39■■□□□ 1.01
AC133539.1-201ENST00000562644 ADAMTS12P58397 1594 aa21.35■■□□□ 1.01
AC133539.1-201ENST00000562644 ERICH3Q5RHP9 1530 aa21.32■■□□□ 1
AC133539.1-201ENST00000562644 CLASP1Q7Z460 1538 aa21.31■■□□□ 1
AC133539.1-201ENST00000562644 GRIN2AQ12879 1464 aa21.3■■□□□ 1
AC133539.1-201ENST00000562644 FHAD1B1AJZ9 1412 aa21.29■■□□□ 1
AC133539.1-201ENST00000562644 KIF27Q86VH2 1401 aa21.24■□□□□ 0.99
AC133539.1-201ENST00000562644 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
AC133539.1-201ENST00000562644 CEP170Q5SW79 1584 aa21.2■□□□□ 0.98
AC133539.1-201ENST00000562644 ARAP1Q96P48 1450 aa21.2■□□□□ 0.98
AC133539.1-201ENST00000562644 NUP160Q12769 1436 aa21.16■□□□□ 0.98
AC133539.1-201ENST00000562644 CUL7Q14999 1698 aa21.13■□□□□ 0.97
AC133539.1-201ENST00000562644 IGF1RP08069 1367 aa21.1■□□□□ 0.97
AC133539.1-201ENST00000562644 RUSC2Q8N2Y8 1516 aa21.04■□□□□ 0.96
AC133539.1-201ENST00000562644 ERCC6L2Q5T890 1561 aa21.04■□□□□ 0.96
AC133539.1-201ENST00000562644 CARMIL1Q5VZK9 1371 aa21.03■□□□□ 0.96
AC133539.1-201ENST00000562644 SHROOM2Q13796 1616 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms