RNA–Protein interactions for RNA: ENST00000562492.5

IRF8-202, Transcript of interferon regulatory factor 8, humanhuman

TSL 3 BASIC

Gene IRF8, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-202ENST00000562492 NISCHQ9Y2I1 1504 aa43.05■■■■■ 4.48
IRF8-202ENST00000562492 CCDC180Q9P1Z9 1646 aa38.48■■■■□ 3.75
IRF8-202ENST00000562492 ABCC9O60706 1549 aa37.99■■■■□ 3.67
IRF8-202ENST00000562492 RB1CC1Q8TDY2 1594 aa36.44■■■■□ 3.42
IRF8-202ENST00000562492 NACADO15069 1562 aa36.3■■■■□ 3.4
IRF8-202ENST00000562492 DCAF8L2P0C7V8 631 aa36.22■■■■□ 3.39
IRF8-202ENST00000562492 MYO15BQ96JP2 1530 aa35.95■■■■□ 3.35
IRF8-202ENST00000562492 ZCCHC6Q5VYS8 1495 aaKnown RBP35.77■■■■□ 3.32
IRF8-202ENST00000562492 DCAF1Q9Y4B6 1507 aa35.63■■■■□ 3.29
IRF8-202ENST00000562492 UNC13AQ9UPW8 1703 aa35.46■■■■□ 3.27
IRF8-202ENST00000562492 PABPN1Q86U42 306 aaKnown RBP eCLIP35.43■■■■□ 3.26
IRF8-202ENST00000562492 BICRAQ9NZM4 1560 aa35.2■■■■□ 3.23
IRF8-202ENST00000562492 DNAJC5BQ9UF47 199 aa35.1■■■■□ 3.21
IRF8-202ENST00000562492 SCRIBQ14160 1630 aa35.03■■■■□ 3.2
IRF8-202ENST00000562492 SHROOM4Q9ULL8 1493 aa34.99■■■■□ 3.19
IRF8-202ENST00000562492 EIF4G1Q04637 1599 aaKnown RBP34.39■■■■□ 3.1
IRF8-202ENST00000562492 CC2D2AQ9P2K1 1620 aa34.33■■■■□ 3.09
IRF8-202ENST00000562492 CECR2Q9BXF3 1484 aa34.21■■■■□ 3.07
IRF8-202ENST00000562492 SMARCA4P51532 1647 aa33.48■■■□□ 2.95
IRF8-202ENST00000562492 NCAPD3P42695 1498 aa33.46■■■□□ 2.95
IRF8-202ENST00000562492 BAZ1AQ9NRL2 1556 aaPredicted RBP33.45■■■□□ 2.95
IRF8-202ENST00000562492 SMARCA2P51531 1590 aa33.42■■■□□ 2.94
IRF8-202ENST00000562492 ATAD2BQ9ULI0 1458 aa33.4■■■□□ 2.94
IRF8-202ENST00000562492 HMGXB3Q12766 1538 aa33.28■■■□□ 2.92
IRF8-202ENST00000562492 BAZ1BQ9UIG0 1483 aaKnown RBP33.17■■■□□ 2.9
IRF8-202ENST00000562492 PEG3Q9GZU2 1588 aa33.16■■■□□ 2.9
IRF8-202ENST00000562492 MROH2BQ7Z745 1585 aa33.12■■■□□ 2.89
IRF8-202ENST00000562492 ERCC6Q03468 1493 aa32.88■■■□□ 2.85
IRF8-202ENST00000562492 WIZO95785 1651 aa32.74■■■□□ 2.83
IRF8-202ENST00000562492 NESP48681 1621 aa32.7■■■□□ 2.83
IRF8-202ENST00000562492 LAMC3Q9Y6N6 1575 aa32.68■■■□□ 2.82
IRF8-202ENST00000562492 CUX2O14529 1486 aa32.65■■■□□ 2.82
IRF8-202ENST00000562492 RSF1Q96T23 1441 aaPredicted RBP32.63■■■□□ 2.81
IRF8-202ENST00000562492 PDS5BQ9NTI5 1447 aa32.52■■■□□ 2.8
IRF8-202ENST00000562492 CADPSQ9ULU8 1353 aa32.49■■■□□ 2.79
IRF8-202ENST00000562492 TOP2AP11388 1531 aaKnown RBP32.44■■■□□ 2.78
IRF8-202ENST00000562492 KIF21AQ7Z4S6 1674 aa32.32■■■□□ 2.76
IRF8-202ENST00000562492 THOC2Q8NI27 1593 aaKnown RBP32.31■■■□□ 2.76
IRF8-202ENST00000562492 CFTRP13569 1480 aa32.19■■■□□ 2.74
IRF8-202ENST00000562492 MRC2Q9UBG0 1479 aa32.16■■■□□ 2.74
IRF8-202ENST00000562492 CEP164Q9UPV0 1460 aa32.14■■■□□ 2.74
IRF8-202ENST00000562492 FANCD2Q9BXW9 1451 aa32.11■■■□□ 2.73
IRF8-202ENST00000562492 DNAJC5Q9H3Z4 198 aa32.06■■■□□ 2.72
IRF8-202ENST00000562492 CCDC88BA6NC98 1476 aa32.03■■■□□ 2.72
IRF8-202ENST00000562492 WDR62O43379 1518 aa32.02■■■□□ 2.72
IRF8-202ENST00000562492 PRDM2Q13029 1718 aa31.91■■■□□ 2.7
IRF8-202ENST00000562492 URB2Q14146 1524 aaKnown RBP31.75■■■□□ 2.67
IRF8-202ENST00000562492 ABCC8Q09428 1581 aa31.62■■■□□ 2.65
IRF8-202ENST00000562492 SUPT5HO00267 1087 aaKnown RBP31.58■■■□□ 2.65
IRF8-202ENST00000562492 TOPBP1Q92547 1522 aa31.53■■■□□ 2.64
IRF8-202ENST00000562492 DNMBPQ6XZF7 1577 aa31.48■■■□□ 2.63
IRF8-202ENST00000562492 IFT140Q96RY7 1462 aa31.48■■■□□ 2.63
IRF8-202ENST00000562492 ZNF608Q9ULD9 1512 aaPredicted RBP31.27■■■□□ 2.6
IRF8-202ENST00000562492 OSCARQ8IYS5 282 aa31.25■■■□□ 2.59
IRF8-202ENST00000562492 POLA1P09884 1462 aaPredicted RBP31.23■■■□□ 2.59
IRF8-202ENST00000562492 EIF4G3O43432 1585 aaKnown RBP31.17■■■□□ 2.58
IRF8-202ENST00000562492 TARBP1Q13395 1621 aaKnown RBP31.16■■■□□ 2.58
IRF8-202ENST00000562492 SOGA1O94964 1423 aa31.15■■■□□ 2.58
IRF8-202ENST00000562492 FGD5Q6ZNL6 1462 aa31.11■■■□□ 2.57
IRF8-202ENST00000562492 CUX1P39880 1505 aa31.1■■■□□ 2.57
IRF8-202ENST00000562492 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.57
IRF8-202ENST00000562492 RAD54L2Q9Y4B4 1467 aa31.07■■■□□ 2.56
IRF8-202ENST00000562492 WDR97A6NE52 1622 aa31.03■■■□□ 2.56
IRF8-202ENST00000562492 TDRD9Q8NDG6 1382 aaKnown RBP30.98■■■□□ 2.55
IRF8-202ENST00000562492 FBLN2P98095 1184 aa30.89■■■□□ 2.54
IRF8-202ENST00000562492 TRIM41Q8WV44 630 aa30.87■■■□□ 2.53
IRF8-202ENST00000562492 WRNQ14191 1432 aaPredicted RBP eCLIP30.85■■■□□ 2.53
IRF8-202ENST00000562492 GRIN2BQ13224 1484 aa30.84■■■□□ 2.53
IRF8-202ENST00000562492 CHD1O14646 1710 aa30.83■■■□□ 2.53
IRF8-202ENST00000562492 SNAPC4Q5SXM2 1469 aa30.81■■■□□ 2.52
IRF8-202ENST00000562492 MAGI1Q96QZ7 1491 aaPredicted RBP30.81■■■□□ 2.52
IRF8-202ENST00000562492 ABCA10Q8WWZ4 1543 aa30.8■■■□□ 2.52
IRF8-202ENST00000562492 TOP2BQ02880 1626 aa30.78■■■□□ 2.52
IRF8-202ENST00000562492 GAPVD1Q14C86 1478 aa30.77■■■□□ 2.52
IRF8-202ENST00000562492 BIVM-ERCC5R4GMW8 1640 aa30.76■■■□□ 2.52
IRF8-202ENST00000562492 CHMP7Q8WUX9 453 aaPredicted RBP30.76■■■□□ 2.51
IRF8-202ENST00000562492 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
IRF8-202ENST00000562492 RIMBP3CA6NJZ7 1639 aa30.69■■■□□ 2.5
IRF8-202ENST00000562492 RIMBP3BA6NNM3 1639 aa30.69■■■□□ 2.5
IRF8-202ENST00000562492 RIMBP3Q9UFD9 1639 aa30.69■■■□□ 2.5
IRF8-202ENST00000562492 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
IRF8-202ENST00000562492 SYNJ2O15056 1496 aa30.68■■■□□ 2.5
IRF8-202ENST00000562492 ARHGEF11O15085 1522 aa30.67■■■□□ 2.5
IRF8-202ENST00000562492 ABCA5Q8WWZ7 1642 aa30.66■■■□□ 2.5
IRF8-202ENST00000562492 CLASP1Q7Z460 1538 aa30.49■■■□□ 2.47
IRF8-202ENST00000562492 ERICH3Q5RHP9 1530 aa30.45■■■□□ 2.47
IRF8-202ENST00000562492 CYB5RLQ6IPT4 315 aa30.44■■■□□ 2.46
IRF8-202ENST00000562492 ADAMTS12P58397 1594 aa30.42■■■□□ 2.46
IRF8-202ENST00000562492 FHAD1B1AJZ9 1412 aa30.42■■■□□ 2.46
IRF8-202ENST00000562492 GRIN2AQ12879 1464 aa30.41■■■□□ 2.46
IRF8-202ENST00000562492 ARAP1Q96P48 1450 aa30.36■■■□□ 2.45
IRF8-202ENST00000562492 NUP160Q12769 1436 aa30.28■■■□□ 2.44
IRF8-202ENST00000562492 KIF27Q86VH2 1401 aa30.28■■■□□ 2.44
IRF8-202ENST00000562492 CEP170Q5SW79 1584 aa30.21■■■□□ 2.43
IRF8-202ENST00000562492 CUL7Q14999 1698 aa30.11■■■□□ 2.41
IRF8-202ENST00000562492 IGF1RP08069 1367 aa30.11■■■□□ 2.41
IRF8-202ENST00000562492 SHROOM2Q13796 1616 aa30.06■■■□□ 2.4
IRF8-202ENST00000562492 TRHP20396 242 aaPredicted RBP30.04■■■□□ 2.4
IRF8-202ENST00000562492 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
IRF8-202ENST00000562492 CARMIL1Q5VZK9 1371 aa29.98■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms