RNA–Protein interactions for RNA: ENST00000562238.5

ECI1-203, Transcript of enoyl-CoA delta isomerase 1, humanhuman

TSL 1 (best) BASIC

Gene ECI1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECI1-203ENST00000562238 LARP4Q71RC2 724 aaKnown RBP eCLIP24.54■■□□□ 1.525e-10■■■■■ 76.2
ECI1-203ENST00000562238 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.69■■■□□ 2.183e-9■■■■■ 65.2
ECI1-203ENST00000562238 DHX30Q7L2E3 1194 aaKnown RBP eCLIP31.73■■■□□ 2.672e-6■■■■■ 33.4
ECI1-203ENST00000562238 RBM22Q9NW64 420 aaKnown RBP eCLIP26.98■■□□□ 1.913e-6■■■■■ 30.2
ECI1-203ENST00000562238 SF3B4Q15427 424 aaKnown RBP eCLIP24.36■■□□□ 1.498e-8■■■■■ 29.8
ECI1-203ENST00000562238 PRPF4O43172 522 aaKnown RBP eCLIP25.52■■□□□ 1.689e-7■■■■■ 27.2
ECI1-203ENST00000562238 EFTUD2Q15029 972 aaKnown RBP eCLIP25.45■■□□□ 1.662e-7■■■■□ 26.5
ECI1-203ENST00000562238 FUSP35637 526 aaKnown RBP eCLIP18.16■□□□□ 0.51e-7■■■■□ 25
ECI1-203ENST00000562238 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP23.15■■□□□ 1.33e-17■■■■□ 23.2
ECI1-203ENST00000562238 SRSF7Q16629 238 aaKnown RBP eCLIP20.93■□□□□ 0.947e-7■■■■□ 23.2
ECI1-203ENST00000562238 UPF1Q92900 1129 aaKnown RBP eCLIP38.43■■■■□ 3.747e-6■■■■□ 22.8
ECI1-203ENST00000562238 HNRNPMP52272 730 aaKnown RBP eCLIP42.83■■■■■ 4.456e-12■■■■□ 20.5
ECI1-203ENST00000562238 SF3A3Q12874 501 aaKnown RBP eCLIP23.68■■□□□ 1.381e-9■■■■□ 19.8
ECI1-203ENST00000562238 RPS3P23396 243 aaKnown RBP eCLIP26.03■■□□□ 1.761e-7■■■□□ 18.8
ECI1-203ENST00000562238 EWSR1Q01844 656 aaKnown RBP eCLIP19.81■□□□□ 0.764e-6■■■□□ 18.1
ECI1-203ENST00000562238 G3BP1Q13283 466 aaKnown RBP eCLIP33.3■■■□□ 2.921e-6■■■□□ 17.9
ECI1-203ENST00000562238 AQRO60306 1485 aaKnown RBP eCLIP48.08■■■■■ 5.298e-7■■■□□ 17.1
ECI1-203ENST00000562238 DDX3XO00571 662 aaKnown RBP eCLIP27.5■■□□□ 1.999e-22■■■□□ 17.1
ECI1-203ENST00000562238 SUB1P53999 127 aaKnown RBP eCLIP20.01■□□□□ 0.792e-13■■■□□ 15.4
ECI1-203ENST00000562238 BUD13Q9BRD0 619 aaKnown RBP eCLIP31.04■■■□□ 2.564e-7■■■□□ 15.4
ECI1-203ENST00000562238 DDX55Q8NHQ9 600 aaKnown RBP eCLIP33.15■■■□□ 2.91e-6■■■□□ 14.6
ECI1-203ENST00000562238 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP29.16■■■□□ 2.263e-10■■□□□ 14.3
ECI1-203ENST00000562238 PABPC4Q13310 644 aaKnown RBP eCLIP32.42■■■□□ 2.789e-8■■□□□ 13
ECI1-203ENST00000562238 ZRANB2O95218 330 aaKnown RBP eCLIP26.77■■□□□ 1.885e-7■■□□□ 12.8
ECI1-203ENST00000562238 ILF3Q12906 894 aaKnown RBP eCLIP26.75■■□□□ 1.878e-6■■□□□ 11.6
ECI1-203ENST00000562238 DDX24Q9GZR7 859 aaKnown RBP eCLIP32.54■■■□□ 2.85e-6■■□□□ 11.5
ECI1-203ENST00000562238 METAP2P50579 478 aaKnown RBP eCLIP30.92■■■□□ 2.541e-6■■□□□ 11.4
ECI1-203ENST00000562238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP43.96■■■■■ 4.637e-8■□□□□ 11
ECI1-203ENST00000562238 PCBP1Q15365 356 aaKnown RBP eCLIP29.83■■■□□ 2.378e-6■□□□□ 10.9
ECI1-203ENST00000562238 PPIGQ13427 754 aaKnown RBP eCLIP31.02■■■□□ 2.567e-7■□□□□ 10.6
ECI1-203ENST00000562238 GRWD1Q9BQ67 446 aaKnown RBP eCLIP41.5■■■■■ 4.234e-10■□□□□ 10.4
ECI1-203ENST00000562238 FMR1Q06787 632 aaKnown RBP eCLIP34.12■■■■□ 3.058e-12■□□□□ 9.8
ECI1-203ENST00000562238 YBX3P16989 372 aaKnown RBP eCLIP35.84■■■■□ 3.337e-7■□□□□ 9.7
ECI1-203ENST00000562238 LIN28BQ6ZN17 250 aaKnown RBP eCLIP30.56■■■□□ 2.486e-9■□□□□ 9.3
ECI1-203ENST00000562238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP41.37■■■■■ 4.216e-6■□□□□ 9.1
ECI1-203ENST00000562238 DDX6P26196 483 aaKnown RBP eCLIP28.68■■■□□ 2.189e-6■□□□□ 8.4
ECI1-203ENST00000562238 FXR2P51116 673 aaKnown RBP eCLIP29.94■■■□□ 2.382e-6■□□□□ 8.3
ECI1-203ENST00000562238 FTOQ9C0B1 505 aaKnown RBP eCLIP30.75■■■□□ 2.512e-14■□□□□ 8.2
Retrieved 38 of 38 RNA–protein pairs in 9.1 ms