RNA–Protein interactions for RNA: ENST00000562086.1

PML-209, Transcript of promyelocytic leukemia, humanhuman

TSL 1 (best)

Gene PML, Length 2,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PML-209ENST00000562086 NISCHQ9Y2I1 1504 aa27.12■■□□□ 1.93
PML-209ENST00000562086 CCDC180Q9P1Z9 1646 aa23.42■■□□□ 1.34
PML-209ENST00000562086 SHROOM4Q9ULL8 1493 aa22.98■■□□□ 1.27
PML-209ENST00000562086 HRCP23327 699 aa22.97■■□□□ 1.27
PML-209ENST00000562086 ZCCHC6Q5VYS8 1495 aaKnown RBP22.84■■□□□ 1.25
PML-209ENST00000562086 SUPT5HO00267 1087 aaKnown RBP22.81■■□□□ 1.24
PML-209ENST00000562086 MYO15BQ96JP2 1530 aa22.7■■□□□ 1.23
PML-209ENST00000562086 CHIC1Q5VXU3 224 aa22.63■■□□□ 1.21
PML-209ENST00000562086 DCAF8L2P0C7V8 631 aa22.56■■□□□ 1.2
PML-209ENST00000562086 DCAF1Q9Y4B6 1507 aa22.45■■□□□ 1.18
PML-209ENST00000562086 PCGF6Q9BYE7 350 aa22.39■■□□□ 1.18
PML-209ENST00000562086 ABCC9O60706 1549 aa22.22■■□□□ 1.15
PML-209ENST00000562086 PPARGC1BQ86YN6 1023 aaKnown RBP22.19■■□□□ 1.14
PML-209ENST00000562086 TRIM26Q12899 539 aaPredicted RBP21.99■■□□□ 1.11
PML-209ENST00000562086 PELP1Q8IZL8 1130 aaKnown RBP21.95■■□□□ 1.1
PML-209ENST00000562086 LOC105371045A0A1W2PR82 267 aa21.85■■□□□ 1.09
PML-209ENST00000562086 ZEB1P37275 1124 aaPredicted RBP21.85■■□□□ 1.09
PML-209ENST00000562086 SCRIBQ14160 1630 aa21.8■■□□□ 1.08
PML-209ENST00000562086 NACADO15069 1562 aa21.77■■□□□ 1.08
PML-209ENST00000562086 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
PML-209ENST00000562086 SCAF1Q9H7N4 1312 aaKnown RBP21.46■■□□□ 1.03
PML-209ENST00000562086 RSF1Q96T23 1441 aaPredicted RBP21.42■■□□□ 1.02
PML-209ENST00000562086 UNC13AQ9UPW8 1703 aa21.35■■□□□ 1.01
PML-209ENST00000562086 TRIM41Q8WV44 630 aa21.31■■□□□ 1
PML-209ENST00000562086 CECR2Q9BXF3 1484 aa21.21■□□□□ 0.99
PML-209ENST00000562086 ACIN1Q9UKV3 1341 aaKnown RBP21.11■□□□□ 0.97
PML-209ENST00000562086 MYT1Q01538 1121 aa21.09■□□□□ 0.97
PML-209ENST00000562086 PABPN1Q86U42 306 aaKnown RBP eCLIP21.08■□□□□ 0.96
PML-209ENST00000562086 MROH2BQ7Z745 1585 aa21.06■□□□□ 0.96
PML-209ENST00000562086 BICRAQ9NZM4 1560 aa21.06■□□□□ 0.96
PML-209ENST00000562086 FAM9AQ8IZU1 332 aaPredicted RBP21.01■□□□□ 0.95
PML-209ENST00000562086 NEUROD1Q13562 356 aa20.95■□□□□ 0.94
PML-209ENST00000562086 WIZO95785 1651 aa20.93■□□□□ 0.94
PML-209ENST00000562086 CENPBP07199 599 aaPredicted RBP20.9■□□□□ 0.94
PML-209ENST00000562086 WRNQ14191 1432 aaPredicted RBP eCLIP20.87■□□□□ 0.93
PML-209ENST00000562086 EIF4G1Q04637 1599 aaKnown RBP20.87■□□□□ 0.93
PML-209ENST00000562086 BAZ1AQ9NRL2 1556 aaPredicted RBP20.87■□□□□ 0.93
PML-209ENST00000562086 CCER1Q8TC90 406 aaPredicted RBP20.86■□□□□ 0.93
PML-209ENST00000562086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.84■□□□□ 0.93
PML-209ENST00000562086 DIEXFQ68CQ4 756 aaKnown RBP20.82■□□□□ 0.92
PML-209ENST00000562086 SMARCA4P51532 1647 aa20.81■□□□□ 0.92
PML-209ENST00000562086 GTF3C3Q9Y5Q9 886 aa20.79■□□□□ 0.92
PML-209ENST00000562086 EHMT2Q96KQ7 1210 aa20.67■□□□□ 0.9
PML-209ENST00000562086 CEP162Q5TB80 1403 aa20.59■□□□□ 0.89
PML-209ENST00000562086 TNIKQ9UKE5 1360 aa20.58■□□□□ 0.88
PML-209ENST00000562086 ZNF316A6NFI3 1004 aaPredicted RBP20.57■□□□□ 0.88
PML-209ENST00000562086 TOP2AP11388 1531 aaKnown RBP20.56■□□□□ 0.88
PML-209ENST00000562086 EEA1Q15075 1411 aa20.53■□□□□ 0.88
PML-209ENST00000562086 CCDC88BA6NC98 1476 aa20.48■□□□□ 0.87
PML-209ENST00000562086 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
PML-209ENST00000562086 SMARCA2P51531 1590 aa20.45■□□□□ 0.86
PML-209ENST00000562086 ATAD2BQ9ULI0 1458 aa20.42■□□□□ 0.86
PML-209ENST00000562086 ABCC8Q09428 1581 aa20.42■□□□□ 0.86
PML-209ENST00000562086 SOGA1O94964 1423 aa20.35■□□□□ 0.85
PML-209ENST00000562086 GOLGA3Q08378 1498 aa20.34■□□□□ 0.85
PML-209ENST00000562086 CSRNP3Q8WYN3 585 aa20.31■□□□□ 0.84
PML-209ENST00000562086 BAZ1BQ9UIG0 1483 aaKnown RBP20.3■□□□□ 0.84
PML-209ENST00000562086 CLSPNQ9HAW4 1339 aa20.28■□□□□ 0.84
PML-209ENST00000562086 MIER1Q8N108 512 aa20.27■□□□□ 0.84
PML-209ENST00000562086 KIF21BO75037 1637 aa20.21■□□□□ 0.83
PML-209ENST00000562086 YTHDC1Q96MU7 727 aaKnown RBP20.21■□□□□ 0.83
PML-209ENST00000562086 TTBK1Q5TCY1 1321 aaPredicted RBP20.2■□□□□ 0.82
PML-209ENST00000562086 RUSC2Q8N2Y8 1516 aa20.2■□□□□ 0.82
PML-209ENST00000562086 CEP164Q9UPV0 1460 aa20.18■□□□□ 0.82
PML-209ENST00000562086 UBTFP17480 764 aaKnown RBP20.17■□□□□ 0.82
PML-209ENST00000562086 NCAPD3P42695 1498 aa20.15■□□□□ 0.82
PML-209ENST00000562086 VPS8Q8N3P4 1428 aa20.12■□□□□ 0.81
PML-209ENST00000562086 HMGXB3Q12766 1538 aa20.1■□□□□ 0.81
PML-209ENST00000562086 CLIP1P30622 1438 aa20.08■□□□□ 0.8
PML-209ENST00000562086 CC2D2AQ9P2K1 1620 aa20.05■□□□□ 0.8
PML-209ENST00000562086 HNRNPUL2Q1KMD3 747 aaKnown RBP20.03■□□□□ 0.8
PML-209ENST00000562086 SYNJ1O43426 1573 aa19.97■□□□□ 0.79
PML-209ENST00000562086 SUPT16HQ9Y5B9 1047 aaKnown RBP19.95■□□□□ 0.78
PML-209ENST00000562086 DHX57Q6P158 1386 aaKnown RBP19.93■□□□□ 0.78
PML-209ENST00000562086 APLP2Q06481 763 aa19.89■□□□□ 0.77
PML-209ENST00000562086 RAPGEF2Q9Y4G8 1499 aa19.86■□□□□ 0.77
PML-209ENST00000562086 CUX2O14529 1486 aa19.85■□□□□ 0.77
PML-209ENST00000562086 ERICH3Q5RHP9 1530 aa19.8■□□□□ 0.76
PML-209ENST00000562086 TSHZ2Q9NRE2 1034 aa19.79■□□□□ 0.76
PML-209ENST00000562086 CFTRP13569 1480 aa19.79■□□□□ 0.76
PML-209ENST00000562086 RRBP1Q9P2E9 1410 aaKnown RBP19.79■□□□□ 0.76
PML-209ENST00000562086 DNAJC5BQ9UF47 199 aa19.76■□□□□ 0.75
PML-209ENST00000562086 ANP32EQ9BTT0 268 aa19.75■□□□□ 0.75
PML-209ENST00000562086 TOP2BQ02880 1626 aa19.74■□□□□ 0.75
PML-209ENST00000562086 ARAP1Q96P48 1450 aa19.73■□□□□ 0.75
PML-209ENST00000562086 PRXQ9BXM0 1461 aa19.7■□□□□ 0.74
PML-209ENST00000562086 BIVM-ERCC5R4GMW8 1640 aa19.69■□□□□ 0.74
PML-209ENST00000562086 CADPSQ9ULU8 1353 aa19.68■□□□□ 0.74
PML-209ENST00000562086 PRDM2Q13029 1718 aa19.67■□□□□ 0.74
PML-209ENST00000562086 CUX1P39880 1505 aa19.65■□□□□ 0.74
PML-209ENST00000562086 NESP48681 1621 aa19.62■□□□□ 0.73
PML-209ENST00000562086 CCNB3Q8WWL7 1395 aa19.58■□□□□ 0.73
PML-209ENST00000562086 KANK4Q5T7N3 995 aaPredicted RBP19.57■□□□□ 0.72
PML-209ENST00000562086 MAPKBP1O60336 1514 aa19.54■□□□□ 0.72
PML-209ENST00000562086 MAP3K1Q13233 1512 aa19.51■□□□□ 0.71
PML-209ENST00000562086 FANCD2Q9BXW9 1451 aa19.5■□□□□ 0.71
PML-209ENST00000562086 RAB3GAP2Q9H2M9 1393 aa19.45■□□□□ 0.7
PML-209ENST00000562086 ARHGAP35Q9NRY4 1499 aa19.45■□□□□ 0.7
PML-209ENST00000562086 BCL11AQ9H165 835 aa19.44■□□□□ 0.7
PML-209ENST00000562086 KCNH8Q96L42 1107 aa19.43■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms