RNA–Protein interactions for RNA: ENST00000561695.1

TSC2-217, Transcript of TSC complex subunit 2, humanhuman

TSL 2

Gene TSC2, Length 555 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-217ENST00000561695 NISCHQ9Y2I1 1504 aa41.4■■■■■ 4.22
TSC2-217ENST00000561695 CCDC180Q9P1Z9 1646 aa37.15■■■■□ 3.54
TSC2-217ENST00000561695 ABCC9O60706 1549 aa36.97■■■■□ 3.51
TSC2-217ENST00000561695 RB1CC1Q8TDY2 1594 aa35.31■■■■□ 3.24
TSC2-217ENST00000561695 NACADO15069 1562 aa35.11■■■■□ 3.21
TSC2-217ENST00000561695 DCAF8L2P0C7V8 631 aa34.83■■■■□ 3.17
TSC2-217ENST00000561695 MYO15BQ96JP2 1530 aa34.71■■■■□ 3.15
TSC2-217ENST00000561695 DNAJC5BQ9UF47 199 aa34.59■■■■□ 3.13
TSC2-217ENST00000561695 UNC13AQ9UPW8 1703 aa34.47■■■■□ 3.11
TSC2-217ENST00000561695 PABPN1Q86U42 306 aaKnown RBP eCLIP34.42■■■■□ 3.1
TSC2-217ENST00000561695 ZCCHC6Q5VYS8 1495 aaKnown RBP34.33■■■■□ 3.09
TSC2-217ENST00000561695 DCAF1Q9Y4B6 1507 aa34.27■■■■□ 3.08
TSC2-217ENST00000561695 BICRAQ9NZM4 1560 aa34.23■■■■□ 3.07
TSC2-217ENST00000561695 SHROOM4Q9ULL8 1493 aa33.9■■■■□ 3.02
TSC2-217ENST00000561695 SCRIBQ14160 1630 aa33.76■■■■□ 3
TSC2-217ENST00000561695 CC2D2AQ9P2K1 1620 aa33.43■■■□□ 2.94
TSC2-217ENST00000561695 EIF4G1Q04637 1599 aaKnown RBP33.4■■■□□ 2.94
TSC2-217ENST00000561695 CECR2Q9BXF3 1484 aa33.33■■■□□ 2.93
TSC2-217ENST00000561695 NCAPD3P42695 1498 aa32.41■■■□□ 2.78
TSC2-217ENST00000561695 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
TSC2-217ENST00000561695 SMARCA4P51532 1647 aa32.27■■■□□ 2.76
TSC2-217ENST00000561695 SMARCA2P51531 1590 aa32.24■■■□□ 2.75
TSC2-217ENST00000561695 HMGXB3Q12766 1538 aa32.17■■■□□ 2.74
TSC2-217ENST00000561695 BAZ1AQ9NRL2 1556 aaPredicted RBP32.15■■■□□ 2.74
TSC2-217ENST00000561695 PEG3Q9GZU2 1588 aa32.01■■■□□ 2.71
TSC2-217ENST00000561695 BAZ1BQ9UIG0 1483 aaKnown RBP31.97■■■□□ 2.71
TSC2-217ENST00000561695 ERCC6Q03468 1493 aa31.95■■■□□ 2.7
TSC2-217ENST00000561695 CUX2O14529 1486 aa31.91■■■□□ 2.7
TSC2-217ENST00000561695 MROH2BQ7Z745 1585 aa31.86■■■□□ 2.69
TSC2-217ENST00000561695 DNAJC5Q9H3Z4 198 aa31.78■■■□□ 2.68
TSC2-217ENST00000561695 NESP48681 1621 aa31.77■■■□□ 2.68
TSC2-217ENST00000561695 LAMC3Q9Y6N6 1575 aa31.66■■■□□ 2.66
TSC2-217ENST00000561695 PDS5BQ9NTI5 1447 aa31.49■■■□□ 2.63
TSC2-217ENST00000561695 WIZO95785 1651 aa31.48■■■□□ 2.63
TSC2-217ENST00000561695 THOC2Q8NI27 1593 aaKnown RBP31.47■■■□□ 2.63
TSC2-217ENST00000561695 CADPSQ9ULU8 1353 aa31.42■■■□□ 2.62
TSC2-217ENST00000561695 KIF21AQ7Z4S6 1674 aa31.38■■■□□ 2.61
TSC2-217ENST00000561695 RSF1Q96T23 1441 aaPredicted RBP31.26■■■□□ 2.6
TSC2-217ENST00000561695 MRC2Q9UBG0 1479 aa31.17■■■□□ 2.58
TSC2-217ENST00000561695 TOP2AP11388 1531 aaKnown RBP31.13■■■□□ 2.57
TSC2-217ENST00000561695 WDR62O43379 1518 aa31.1■■■□□ 2.57
TSC2-217ENST00000561695 CFTRP13569 1480 aa31.08■■■□□ 2.57
TSC2-217ENST00000561695 CEP164Q9UPV0 1460 aa31.06■■■□□ 2.56
TSC2-217ENST00000561695 FANCD2Q9BXW9 1451 aa31.03■■■□□ 2.56
TSC2-217ENST00000561695 PRDM2Q13029 1718 aa30.77■■■□□ 2.52
TSC2-217ENST00000561695 CCDC88BA6NC98 1476 aa30.76■■■□□ 2.51
TSC2-217ENST00000561695 URB2Q14146 1524 aaKnown RBP30.74■■■□□ 2.51
TSC2-217ENST00000561695 ABCC8Q09428 1581 aa30.47■■■□□ 2.47
TSC2-217ENST00000561695 IFT140Q96RY7 1462 aa30.46■■■□□ 2.47
TSC2-217ENST00000561695 OSCARQ8IYS5 282 aa30.46■■■□□ 2.47
TSC2-217ENST00000561695 TOPBP1Q92547 1522 aa30.45■■■□□ 2.47
TSC2-217ENST00000561695 DNMBPQ6XZF7 1577 aa30.36■■■□□ 2.45
TSC2-217ENST00000561695 ZNF608Q9ULD9 1512 aaPredicted RBP30.33■■■□□ 2.45
TSC2-217ENST00000561695 TRIM41Q8WV44 630 aa30.33■■■□□ 2.45
TSC2-217ENST00000561695 EIF4G3O43432 1585 aaKnown RBP30.2■■■□□ 2.42
TSC2-217ENST00000561695 TARBP1Q13395 1621 aaKnown RBP30.18■■■□□ 2.42
TSC2-217ENST00000561695 POLA1P09884 1462 aaPredicted RBP30.14■■■□□ 2.42
TSC2-217ENST00000561695 AQRO60306 1485 aaKnown RBP eCLIP30.08■■■□□ 2.41
TSC2-217ENST00000561695 SOGA1O94964 1423 aa30.02■■■□□ 2.4
TSC2-217ENST00000561695 RIMBP3CA6NJZ7 1639 aa30.01■■■□□ 2.39
TSC2-217ENST00000561695 RIMBP3BA6NNM3 1639 aa30.01■■■□□ 2.39
TSC2-217ENST00000561695 RIMBP3Q9UFD9 1639 aa30.01■■■□□ 2.39
TSC2-217ENST00000561695 RAD54L2Q9Y4B4 1467 aa29.99■■■□□ 2.39
TSC2-217ENST00000561695 WDR97A6NE52 1622 aa29.96■■■□□ 2.39
TSC2-217ENST00000561695 FGD5Q6ZNL6 1462 aa29.95■■■□□ 2.39
TSC2-217ENST00000561695 CHD1O14646 1710 aa29.95■■■□□ 2.38
TSC2-217ENST00000561695 ARHGEF11O15085 1522 aa29.94■■■□□ 2.38
TSC2-217ENST00000561695 CUX1P39880 1505 aa29.93■■■□□ 2.38
TSC2-217ENST00000561695 TDRD9Q8NDG6 1382 aaKnown RBP29.91■■■□□ 2.38
TSC2-217ENST00000561695 SUPT5HO00267 1087 aaKnown RBP29.87■■■□□ 2.37
TSC2-217ENST00000561695 FBLN2P98095 1184 aa29.85■■■□□ 2.37
TSC2-217ENST00000561695 SNAPC4Q5SXM2 1469 aa29.79■■■□□ 2.36
TSC2-217ENST00000561695 MAGI1Q96QZ7 1491 aaPredicted RBP29.77■■■□□ 2.36
TSC2-217ENST00000561695 GRIN2BQ13224 1484 aa29.76■■■□□ 2.35
TSC2-217ENST00000561695 CHMP7Q8WUX9 453 aaPredicted RBP29.7■■■□□ 2.35
TSC2-217ENST00000561695 CYB5RLQ6IPT4 315 aa29.69■■■□□ 2.34
TSC2-217ENST00000561695 ABCA10Q8WWZ4 1543 aa29.66■■■□□ 2.34
TSC2-217ENST00000561695 SYNJ2O15056 1496 aa29.66■■■□□ 2.34
TSC2-217ENST00000561695 GAPVD1Q14C86 1478 aa29.66■■■□□ 2.34
TSC2-217ENST00000561695 SYNJ1O43426 1573 aa29.64■■■□□ 2.34
TSC2-217ENST00000561695 CLASP1Q7Z460 1538 aa29.64■■■□□ 2.34
TSC2-217ENST00000561695 ARAP1Q96P48 1450 aa29.63■■■□□ 2.33
TSC2-217ENST00000561695 PBRM1Q86U86 1689 aa29.62■■■□□ 2.33
TSC2-217ENST00000561695 ABCA5Q8WWZ7 1642 aa29.59■■■□□ 2.33
TSC2-217ENST00000561695 WRNQ14191 1432 aaPredicted RBP eCLIP29.56■■■□□ 2.32
TSC2-217ENST00000561695 TOP2BQ02880 1626 aa29.52■■■□□ 2.32
TSC2-217ENST00000561695 BIVM-ERCC5R4GMW8 1640 aa29.51■■■□□ 2.31
TSC2-217ENST00000561695 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
TSC2-217ENST00000561695 ADAMTS12P58397 1594 aa29.35■■■□□ 2.29
TSC2-217ENST00000561695 TRHP20396 242 aaPredicted RBP29.33■■■□□ 2.29
TSC2-217ENST00000561695 ERICH3Q5RHP9 1530 aa29.3■■■□□ 2.28
TSC2-217ENST00000561695 FHAD1B1AJZ9 1412 aa29.3■■■□□ 2.28
TSC2-217ENST00000561695 NUP160Q12769 1436 aa29.28■■■□□ 2.28
TSC2-217ENST00000561695 CEP170Q5SW79 1584 aa29.23■■■□□ 2.27
TSC2-217ENST00000561695 SHROOM2Q13796 1616 aa29.14■■■□□ 2.26
TSC2-217ENST00000561695 ERCC6L2Q5T890 1561 aa29.12■■■□□ 2.25
TSC2-217ENST00000561695 JPH4Q96JJ6 628 aa28.98■■■□□ 2.23
TSC2-217ENST00000561695 PRG4Q92954 1404 aaPredicted RBP28.96■■■□□ 2.23
TSC2-217ENST00000561695 KIF27Q86VH2 1401 aa28.95■■■□□ 2.23
TSC2-217ENST00000561695 RUSC2Q8N2Y8 1516 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms