RNA–Protein interactions for RNA: ENST00000561665.5

CLCN7-204, Transcript of chloride voltage-gated channel 7, humanhuman

TSL 4

Gene CLCN7, Length 561 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN7-204ENST00000561665 NISCHQ9Y2I1 1504 aa55.37■■■■■ 6.45
CLCN7-204ENST00000561665 CCDC180Q9P1Z9 1646 aa49.19■■■■■ 5.46
CLCN7-204ENST00000561665 ABCC9O60706 1549 aa48.47■■■■■ 5.35
CLCN7-204ENST00000561665 RB1CC1Q8TDY2 1594 aa46.47■■■■■ 5.03
CLCN7-204ENST00000561665 DCAF8L2P0C7V8 631 aa46.42■■■■■ 5.02
CLCN7-204ENST00000561665 NACADO15069 1562 aa46.39■■■■■ 5.02
CLCN7-204ENST00000561665 MYO15BQ96JP2 1530 aa46.07■■■■■ 4.97
CLCN7-204ENST00000561665 ZCCHC6Q5VYS8 1495 aaKnown RBP46.06■■■■■ 4.96
CLCN7-204ENST00000561665 DCAF1Q9Y4B6 1507 aa45.79■■■■■ 4.92
CLCN7-204ENST00000561665 PABPN1Q86U42 306 aaKnown RBP eCLIP45.33■■■■■ 4.85
CLCN7-204ENST00000561665 UNC13AQ9UPW8 1703 aa45.31■■■■■ 4.84
CLCN7-204ENST00000561665 BICRAQ9NZM4 1560 aa45.11■■■■■ 4.81
CLCN7-204ENST00000561665 SCRIBQ14160 1630 aa44.93■■■■■ 4.78
CLCN7-204ENST00000561665 DNAJC5BQ9UF47 199 aa44.79■■■■■ 4.76
CLCN7-204ENST00000561665 SHROOM4Q9ULL8 1493 aa44.58■■■■■ 4.73
CLCN7-204ENST00000561665 EIF4G1Q04637 1599 aaKnown RBP43.92■■■■■ 4.62
CLCN7-204ENST00000561665 CC2D2AQ9P2K1 1620 aa43.78■■■■■ 4.6
CLCN7-204ENST00000561665 CECR2Q9BXF3 1484 aa43.57■■■■■ 4.56
CLCN7-204ENST00000561665 SMARCA4P51532 1647 aa42.95■■■■■ 4.47
CLCN7-204ENST00000561665 BAZ1AQ9NRL2 1556 aaPredicted RBP42.9■■■■■ 4.46
CLCN7-204ENST00000561665 NCAPD3P42695 1498 aa42.87■■■■■ 4.45
CLCN7-204ENST00000561665 ATAD2BQ9ULI0 1458 aa42.86■■■■■ 4.45
CLCN7-204ENST00000561665 SMARCA2P51531 1590 aa42.73■■■■■ 4.43
CLCN7-204ENST00000561665 MROH2BQ7Z745 1585 aa42.69■■■■■ 4.42
CLCN7-204ENST00000561665 PEG3Q9GZU2 1588 aa42.56■■■■■ 4.4
CLCN7-204ENST00000561665 HMGXB3Q12766 1538 aa42.56■■■■■ 4.4
CLCN7-204ENST00000561665 BAZ1BQ9UIG0 1483 aaKnown RBP42.45■■■■■ 4.39
CLCN7-204ENST00000561665 RSF1Q96T23 1441 aaPredicted RBP42.16■■■■■ 4.34
CLCN7-204ENST00000561665 WIZO95785 1651 aa42.15■■■■■ 4.34
CLCN7-204ENST00000561665 NESP48681 1621 aa41.89■■■■■ 4.3
CLCN7-204ENST00000561665 ERCC6Q03468 1493 aa41.76■■■■■ 4.28
CLCN7-204ENST00000561665 TOP2AP11388 1531 aaKnown RBP41.7■■■■■ 4.27
CLCN7-204ENST00000561665 LAMC3Q9Y6N6 1575 aa41.69■■■■■ 4.26
CLCN7-204ENST00000561665 CADPSQ9ULU8 1353 aa41.63■■■■■ 4.25
CLCN7-204ENST00000561665 PDS5BQ9NTI5 1447 aa41.48■■■■■ 4.23
CLCN7-204ENST00000561665 CUX2O14529 1486 aa41.4■■■■■ 4.22
CLCN7-204ENST00000561665 CFTRP13569 1480 aa41.31■■■■■ 4.2
CLCN7-204ENST00000561665 CCDC88BA6NC98 1476 aa41.28■■■■■ 4.2
CLCN7-204ENST00000561665 KIF21AQ7Z4S6 1674 aa41.26■■■■■ 4.2
CLCN7-204ENST00000561665 THOC2Q8NI27 1593 aaKnown RBP41.22■■■■■ 4.19
CLCN7-204ENST00000561665 FANCD2Q9BXW9 1451 aa41.11■■■■■ 4.17
CLCN7-204ENST00000561665 MRC2Q9UBG0 1479 aa41.04■■■■■ 4.16
CLCN7-204ENST00000561665 CEP164Q9UPV0 1460 aa41.04■■■■■ 4.16
CLCN7-204ENST00000561665 SUPT5HO00267 1087 aaKnown RBP40.95■■■■■ 4.15
CLCN7-204ENST00000561665 WDR62O43379 1518 aa40.89■■■■■ 4.14
CLCN7-204ENST00000561665 PRDM2Q13029 1718 aa40.76■■■■■ 4.12
CLCN7-204ENST00000561665 URB2Q14146 1524 aaKnown RBP40.72■■■■■ 4.11
CLCN7-204ENST00000561665 DNAJC5Q9H3Z4 198 aa40.47■■■■■ 4.07
CLCN7-204ENST00000561665 TOPBP1Q92547 1522 aa40.42■■■■■ 4.06
CLCN7-204ENST00000561665 ABCC8Q09428 1581 aa40.39■■■■■ 4.06
CLCN7-204ENST00000561665 DNMBPQ6XZF7 1577 aa40.31■■■■■ 4.04
CLCN7-204ENST00000561665 IFT140Q96RY7 1462 aa40.21■■■■■ 4.03
CLCN7-204ENST00000561665 ZNF608Q9ULD9 1512 aaPredicted RBP40.08■■■■■ 4.01
CLCN7-204ENST00000561665 POLA1P09884 1462 aaPredicted RBP40.07■■■■■ 4
CLCN7-204ENST00000561665 CUX1P39880 1505 aa40.05■■■■■ 4
CLCN7-204ENST00000561665 TARBP1Q13395 1621 aaKnown RBP39.97■■■■□ 3.99
CLCN7-204ENST00000561665 SOGA1O94964 1423 aa39.93■■■■□ 3.98
CLCN7-204ENST00000561665 FGD5Q6ZNL6 1462 aa39.93■■■■□ 3.98
CLCN7-204ENST00000561665 RAD54L2Q9Y4B4 1467 aa39.93■■■■□ 3.98
CLCN7-204ENST00000561665 AQRO60306 1485 aaKnown RBP eCLIP39.84■■■■□ 3.97
CLCN7-204ENST00000561665 EIF4G3O43432 1585 aaKnown RBP39.82■■■■□ 3.97
CLCN7-204ENST00000561665 TDRD9Q8NDG6 1382 aaKnown RBP39.76■■■■□ 3.96
CLCN7-204ENST00000561665 WRNQ14191 1432 aaPredicted RBP eCLIP39.73■■■■□ 3.95
CLCN7-204ENST00000561665 OSCARQ8IYS5 282 aa39.72■■■■□ 3.95
CLCN7-204ENST00000561665 TOP2BQ02880 1626 aa39.6■■■■□ 3.93
CLCN7-204ENST00000561665 SYNJ1O43426 1573 aa39.59■■■■□ 3.93
CLCN7-204ENST00000561665 WDR97A6NE52 1622 aa39.59■■■■□ 3.93
CLCN7-204ENST00000561665 BIVM-ERCC5R4GMW8 1640 aa39.56■■■■□ 3.92
CLCN7-204ENST00000561665 ABCA10Q8WWZ4 1543 aa39.55■■■■□ 3.92
CLCN7-204ENST00000561665 GRIN2BQ13224 1484 aa39.46■■■■□ 3.91
CLCN7-204ENST00000561665 GAPVD1Q14C86 1478 aa39.43■■■■□ 3.9
CLCN7-204ENST00000561665 SNAPC4Q5SXM2 1469 aa39.43■■■■□ 3.9
CLCN7-204ENST00000561665 FBLN2P98095 1184 aa39.41■■■■□ 3.9
CLCN7-204ENST00000561665 ABCA5Q8WWZ7 1642 aa39.35■■■■□ 3.89
CLCN7-204ENST00000561665 MAGI1Q96QZ7 1491 aaPredicted RBP39.35■■■■□ 3.89
CLCN7-204ENST00000561665 CHD1O14646 1710 aa39.3■■■■□ 3.88
CLCN7-204ENST00000561665 CHMP7Q8WUX9 453 aaPredicted RBP39.27■■■■□ 3.88
CLCN7-204ENST00000561665 PBRM1Q86U86 1689 aa39.23■■■■□ 3.87
CLCN7-204ENST00000561665 SYNJ2O15056 1496 aa39.22■■■■□ 3.87
CLCN7-204ENST00000561665 ERICH3Q5RHP9 1530 aa39.04■■■■□ 3.84
CLCN7-204ENST00000561665 TRIM41Q8WV44 630 aa39.02■■■■□ 3.84
CLCN7-204ENST00000561665 ARHGEF11O15085 1522 aa39.01■■■■□ 3.84
CLCN7-204ENST00000561665 RIMBP3CA6NJZ7 1639 aa39■■■■□ 3.83
CLCN7-204ENST00000561665 RIMBP3BA6NNM3 1639 aa39■■■■□ 3.83
CLCN7-204ENST00000561665 RIMBP3Q9UFD9 1639 aa39■■■■□ 3.83
CLCN7-204ENST00000561665 ADAMTS12P58397 1594 aa38.99■■■■□ 3.83
CLCN7-204ENST00000561665 FHAD1B1AJZ9 1412 aa38.98■■■■□ 3.83
CLCN7-204ENST00000561665 CLASP1Q7Z460 1538 aa38.97■■■■□ 3.83
CLCN7-204ENST00000561665 GRIN2AQ12879 1464 aa38.94■■■■□ 3.82
CLCN7-204ENST00000561665 KIF27Q86VH2 1401 aa38.9■■■■□ 3.82
CLCN7-204ENST00000561665 IGF1RP08069 1367 aa38.84■■■■□ 3.81
CLCN7-204ENST00000561665 NUP160Q12769 1436 aa38.8■■■■□ 3.8
CLCN7-204ENST00000561665 CYB5RLQ6IPT4 315 aa38.74■■■■□ 3.79
CLCN7-204ENST00000561665 CEP170Q5SW79 1584 aa38.74■■■■□ 3.79
CLCN7-204ENST00000561665 ARAP1Q96P48 1450 aa38.7■■■■□ 3.79
CLCN7-204ENST00000561665 CUL7Q14999 1698 aa38.58■■■■□ 3.77
CLCN7-204ENST00000561665 CARMIL1Q5VZK9 1371 aa38.57■■■■□ 3.77
CLCN7-204ENST00000561665 RUSC2Q8N2Y8 1516 aa38.53■■■■□ 3.76
CLCN7-204ENST00000561665 SHROOM2Q13796 1616 aa38.46■■■■□ 3.75
CLCN7-204ENST00000561665 JPH4Q96JJ6 628 aa38.46■■■■□ 3.75
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms