RNA–Protein interactions for RNA: ENST00000561588.2

AP005233.2-201, humanhuman

TSL 3 BASIC

Gene AP005233.2, Length 372 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP005233.2-201ENST00000561588 NISCHQ9Y2I1 1504 aa42.65■■■■■ 4.42
AP005233.2-201ENST00000561588 CCDC180Q9P1Z9 1646 aa38.33■■■■□ 3.73
AP005233.2-201ENST00000561588 ABCC9O60706 1549 aa38.29■■■■□ 3.72
AP005233.2-201ENST00000561588 RB1CC1Q8TDY2 1594 aa36.49■■■■□ 3.43
AP005233.2-201ENST00000561588 NACADO15069 1562 aa36.25■■■■□ 3.39
AP005233.2-201ENST00000561588 DNAJC5BQ9UF47 199 aa36■■■■□ 3.35
AP005233.2-201ENST00000561588 DCAF8L2P0C7V8 631 aa35.86■■■■□ 3.33
AP005233.2-201ENST00000561588 MYO15BQ96JP2 1530 aa35.79■■■■□ 3.32
AP005233.2-201ENST00000561588 UNC13AQ9UPW8 1703 aa35.66■■■■□ 3.3
AP005233.2-201ENST00000561588 PABPN1Q86U42 306 aaKnown RBP eCLIP35.61■■■■□ 3.29
AP005233.2-201ENST00000561588 BICRAQ9NZM4 1560 aa35.44■■■■□ 3.26
AP005233.2-201ENST00000561588 ZCCHC6Q5VYS8 1495 aaKnown RBP35.34■■■■□ 3.25
AP005233.2-201ENST00000561588 DCAF1Q9Y4B6 1507 aa35.29■■■■□ 3.24
AP005233.2-201ENST00000561588 SHROOM4Q9ULL8 1493 aa35.03■■■■□ 3.2
AP005233.2-201ENST00000561588 SCRIBQ14160 1630 aa34.82■■■■□ 3.16
AP005233.2-201ENST00000561588 CC2D2AQ9P2K1 1620 aa34.63■■■■□ 3.13
AP005233.2-201ENST00000561588 EIF4G1Q04637 1599 aaKnown RBP34.56■■■■□ 3.12
AP005233.2-201ENST00000561588 CECR2Q9BXF3 1484 aa34.54■■■■□ 3.12
AP005233.2-201ENST00000561588 NCAPD3P42695 1498 aa33.47■■■□□ 2.95
AP005233.2-201ENST00000561588 ATAD2BQ9ULI0 1458 aa33.33■■■□□ 2.93
AP005233.2-201ENST00000561588 SMARCA4P51532 1647 aa33.28■■■□□ 2.92
AP005233.2-201ENST00000561588 SMARCA2P51531 1590 aa33.24■■■□□ 2.91
AP005233.2-201ENST00000561588 HMGXB3Q12766 1538 aa33.22■■■□□ 2.91
AP005233.2-201ENST00000561588 DNAJC5Q9H3Z4 198 aa33.15■■■□□ 2.9
AP005233.2-201ENST00000561588 CUX2O14529 1486 aa33.12■■■□□ 2.89
AP005233.2-201ENST00000561588 BAZ1AQ9NRL2 1556 aaPredicted RBP33.11■■■□□ 2.89
AP005233.2-201ENST00000561588 ERCC6Q03468 1493 aa33.07■■■□□ 2.88
AP005233.2-201ENST00000561588 PEG3Q9GZU2 1588 aa33.01■■■□□ 2.88
AP005233.2-201ENST00000561588 BAZ1BQ9UIG0 1483 aaKnown RBP32.98■■■□□ 2.87
AP005233.2-201ENST00000561588 NESP48681 1621 aa32.89■■■□□ 2.86
AP005233.2-201ENST00000561588 MROH2BQ7Z745 1585 aa32.83■■■□□ 2.85
AP005233.2-201ENST00000561588 LAMC3Q9Y6N6 1575 aa32.71■■■□□ 2.83
AP005233.2-201ENST00000561588 THOC2Q8NI27 1593 aaKnown RBP32.62■■■□□ 2.81
AP005233.2-201ENST00000561588 PDS5BQ9NTI5 1447 aa32.51■■■□□ 2.79
AP005233.2-201ENST00000561588 KIF21AQ7Z4S6 1674 aa32.48■■■□□ 2.79
AP005233.2-201ENST00000561588 WIZO95785 1651 aa32.42■■■□□ 2.78
AP005233.2-201ENST00000561588 CADPSQ9ULU8 1353 aa32.42■■■□□ 2.78
AP005233.2-201ENST00000561588 MRC2Q9UBG0 1479 aa32.23■■■□□ 2.75
AP005233.2-201ENST00000561588 WDR62O43379 1518 aa32.18■■■□□ 2.74
AP005233.2-201ENST00000561588 RSF1Q96T23 1441 aaPredicted RBP32.14■■■□□ 2.74
AP005233.2-201ENST00000561588 CEP164Q9UPV0 1460 aa32.07■■■□□ 2.72
AP005233.2-201ENST00000561588 CFTRP13569 1480 aa32.06■■■□□ 2.72
AP005233.2-201ENST00000561588 TOP2AP11388 1531 aaKnown RBP32.04■■■□□ 2.72
AP005233.2-201ENST00000561588 FANCD2Q9BXW9 1451 aa32.03■■■□□ 2.72
AP005233.2-201ENST00000561588 URB2Q14146 1524 aaKnown RBP31.77■■■□□ 2.68
AP005233.2-201ENST00000561588 PRDM2Q13029 1718 aa31.72■■■□□ 2.67
AP005233.2-201ENST00000561588 CCDC88BA6NC98 1476 aa31.65■■■□□ 2.66
AP005233.2-201ENST00000561588 OSCARQ8IYS5 282 aa31.55■■■□□ 2.64
AP005233.2-201ENST00000561588 TRIM41Q8WV44 630 aa31.55■■■□□ 2.64
AP005233.2-201ENST00000561588 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
AP005233.2-201ENST00000561588 TOPBP1Q92547 1522 aa31.42■■■□□ 2.62
AP005233.2-201ENST00000561588 ABCC8Q09428 1581 aa31.39■■■□□ 2.61
AP005233.2-201ENST00000561588 ZNF608Q9ULD9 1512 aaPredicted RBP31.37■■■□□ 2.61
AP005233.2-201ENST00000561588 DNMBPQ6XZF7 1577 aa31.31■■■□□ 2.6
AP005233.2-201ENST00000561588 EIF4G3O43432 1585 aaKnown RBP31.22■■■□□ 2.59
AP005233.2-201ENST00000561588 TARBP1Q13395 1621 aaKnown RBP31.17■■■□□ 2.58
AP005233.2-201ENST00000561588 RIMBP3CA6NJZ7 1639 aa31.15■■■□□ 2.58
AP005233.2-201ENST00000561588 RIMBP3BA6NNM3 1639 aa31.15■■■□□ 2.58
AP005233.2-201ENST00000561588 RIMBP3Q9UFD9 1639 aa31.15■■■□□ 2.58
AP005233.2-201ENST00000561588 POLA1P09884 1462 aaPredicted RBP31.1■■■□□ 2.57
AP005233.2-201ENST00000561588 AQRO60306 1485 aaKnown RBP eCLIP31.08■■■□□ 2.57
AP005233.2-201ENST00000561588 ARHGEF11O15085 1522 aa31.05■■■□□ 2.56
AP005233.2-201ENST00000561588 CHD1O14646 1710 aa30.98■■■□□ 2.55
AP005233.2-201ENST00000561588 RAD54L2Q9Y4B4 1467 aa30.95■■■□□ 2.54
AP005233.2-201ENST00000561588 SOGA1O94964 1423 aa30.94■■■□□ 2.54
AP005233.2-201ENST00000561588 WDR97A6NE52 1622 aa30.91■■■□□ 2.54
AP005233.2-201ENST00000561588 FGD5Q6ZNL6 1462 aa30.88■■■□□ 2.53
AP005233.2-201ENST00000561588 TDRD9Q8NDG6 1382 aaKnown RBP30.86■■■□□ 2.53
AP005233.2-201ENST00000561588 CUX1P39880 1505 aa30.85■■■□□ 2.53
AP005233.2-201ENST00000561588 FBLN2P98095 1184 aa30.82■■■□□ 2.52
AP005233.2-201ENST00000561588 SNAPC4Q5SXM2 1469 aa30.76■■■□□ 2.52
AP005233.2-201ENST00000561588 CYB5RLQ6IPT4 315 aa30.76■■■□□ 2.51
AP005233.2-201ENST00000561588 ARAP1Q96P48 1450 aa30.74■■■□□ 2.51
AP005233.2-201ENST00000561588 MAGI1Q96QZ7 1491 aaPredicted RBP30.73■■■□□ 2.51
AP005233.2-201ENST00000561588 GRIN2BQ13224 1484 aa30.7■■■□□ 2.5
AP005233.2-201ENST00000561588 CLASP1Q7Z460 1538 aa30.68■■■□□ 2.5
AP005233.2-201ENST00000561588 CHMP7Q8WUX9 453 aaPredicted RBP30.63■■■□□ 2.49
AP005233.2-201ENST00000561588 SYNJ1O43426 1573 aa30.62■■■□□ 2.49
AP005233.2-201ENST00000561588 SYNJ2O15056 1496 aa30.62■■■□□ 2.49
AP005233.2-201ENST00000561588 GAPVD1Q14C86 1478 aa30.57■■■□□ 2.48
AP005233.2-201ENST00000561588 ABCA10Q8WWZ4 1543 aa30.57■■■□□ 2.48
AP005233.2-201ENST00000561588 PBRM1Q86U86 1689 aa30.56■■■□□ 2.48
AP005233.2-201ENST00000561588 SUPT5HO00267 1087 aaKnown RBP30.53■■■□□ 2.48
AP005233.2-201ENST00000561588 ABCA5Q8WWZ7 1642 aa30.52■■■□□ 2.48
AP005233.2-201ENST00000561588 TRHP20396 242 aaPredicted RBP30.41■■■□□ 2.46
AP005233.2-201ENST00000561588 WRNQ14191 1432 aaPredicted RBP eCLIP30.4■■■□□ 2.46
AP005233.2-201ENST00000561588 TOP2BQ02880 1626 aa30.36■■■□□ 2.45
AP005233.2-201ENST00000561588 BIVM-ERCC5R4GMW8 1640 aa30.36■■■□□ 2.45
AP005233.2-201ENST00000561588 GRIN2AQ12879 1464 aa30.31■■■□□ 2.44
AP005233.2-201ENST00000561588 ADAMTS12P58397 1594 aa30.28■■■□□ 2.44
AP005233.2-201ENST00000561588 NUP160Q12769 1436 aa30.23■■■□□ 2.43
AP005233.2-201ENST00000561588 FHAD1B1AJZ9 1412 aa30.2■■■□□ 2.42
AP005233.2-201ENST00000561588 CEP170Q5SW79 1584 aa30.2■■■□□ 2.42
AP005233.2-201ENST00000561588 ERICH3Q5RHP9 1530 aa30.18■■■□□ 2.42
AP005233.2-201ENST00000561588 ERCC6L2Q5T890 1561 aa30.14■■■□□ 2.42
AP005233.2-201ENST00000561588 SHROOM2Q13796 1616 aa30.12■■■□□ 2.41
AP005233.2-201ENST00000561588 PRG4Q92954 1404 aaPredicted RBP29.89■■■□□ 2.38
AP005233.2-201ENST00000561588 JPH4Q96JJ6 628 aa29.87■■■□□ 2.37
AP005233.2-201ENST00000561588 RUSC2Q8N2Y8 1516 aa29.86■■■□□ 2.37
AP005233.2-201ENST00000561588 IGF1RP08069 1367 aa29.76■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms