RNA–Protein interactions for RNA: ENST00000561449.1

TCF12-226, Transcript of transcription factor 12, humanhuman

TSL 1 (best)

Gene TCF12, Length 914 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF12-226ENST00000561449 AEBP2Q6ZN18 517 aaPredicted RBP21.35■■□□□ 1.01
TCF12-226ENST00000561449 CHIC1Q5VXU3 224 aa20.04■□□□□ 0.8
TCF12-226ENST00000561449 NISCHQ9Y2I1 1504 aa18.93■□□□□ 0.62
TCF12-226ENST00000561449 SENP3Q9H4L4 574 aaPredicted RBP18.25■□□□□ 0.51
TCF12-226ENST00000561449 PHF23Q9BUL5 403 aaPredicted RBP17.98■□□□□ 0.47
TCF12-226ENST00000561449 FOXD1Q16676 465 aa17.04■□□□□ 0.32
TCF12-226ENST00000561449 CCDC180Q9P1Z9 1646 aa16.8■□□□□ 0.28
TCF12-226ENST00000561449 ABCC9O60706 1549 aa16.28■□□□□ 0.2
TCF12-226ENST00000561449 POTEDQ86YR6 584 aa16.13■□□□□ 0.17
TCF12-226ENST00000561449 MSH5O43196 834 aa16.03■□□□□ 0.16
TCF12-226ENST00000561449 PLPPR3Q6T4P5 718 aa15.91■□□□□ 0.14
TCF12-226ENST00000561449 PIAS4Q8N2W9 510 aaPredicted RBP15.88■□□□□ 0.13
TCF12-226ENST00000561449 NACADO15069 1562 aa15.79■□□□□ 0.12
TCF12-226ENST00000561449 ZCCHC6Q5VYS8 1495 aaKnown RBP15.78■□□□□ 0.12
TCF12-226ENST00000561449 MYO15BQ96JP2 1530 aa15.76■□□□□ 0.11
TCF12-226ENST00000561449 RB1CC1Q8TDY2 1594 aa15.75■□□□□ 0.11
TCF12-226ENST00000561449 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
TCF12-226ENST00000561449 DCAF8L2P0C7V8 631 aa15.73■□□□□ 0.11
TCF12-226ENST00000561449 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
TCF12-226ENST00000561449 ADRA2BP18089 450 aa15.7■□□□□ 0.1
TCF12-226ENST00000561449 UNC13AQ9UPW8 1703 aa15.36■□□□□ 0.05
TCF12-226ENST00000561449 SCRIBQ14160 1630 aa15.27■□□□□ 0.03
TCF12-226ENST00000561449 BICRAQ9NZM4 1560 aa15.25■□□□□ 0.03
TCF12-226ENST00000561449 PABPN1Q86U42 306 aaKnown RBP eCLIP15.23■□□□□ 0.03
TCF12-226ENST00000561449 SHROOM4Q9ULL8 1493 aa15.18■□□□□ 0.02
TCF12-226ENST00000561449 DNAJC5BQ9UF47 199 aa14.86□□□□□ -0.03
TCF12-226ENST00000561449 EIF4G1Q04637 1599 aaKnown RBP14.85□□□□□ -0.03
TCF12-226ENST00000561449 CC2D2AQ9P2K1 1620 aa14.75□□□□□ -0.05
TCF12-226ENST00000561449 CECR2Q9BXF3 1484 aa14.7□□□□□ -0.06
TCF12-226ENST00000561449 BAZ1AQ9NRL2 1556 aaPredicted RBP14.68□□□□□ -0.06
TCF12-226ENST00000561449 SMARCA4P51532 1647 aa14.65□□□□□ -0.06
TCF12-226ENST00000561449 NCAPD3P42695 1498 aa14.57□□□□□ -0.08
TCF12-226ENST00000561449 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
TCF12-226ENST00000561449 ATAD2BQ9ULI0 1458 aa14.57□□□□□ -0.08
TCF12-226ENST00000561449 MROH2BQ7Z745 1585 aa14.56□□□□□ -0.08
TCF12-226ENST00000561449 PEG3Q9GZU2 1588 aa14.55□□□□□ -0.08
TCF12-226ENST00000561449 MAPK8IP2Q13387 824 aaPredicted RBP14.49□□□□□ -0.09
TCF12-226ENST00000561449 HMGXB3Q12766 1538 aa14.49□□□□□ -0.09
TCF12-226ENST00000561449 RSF1Q96T23 1441 aaPredicted RBP14.46□□□□□ -0.09
TCF12-226ENST00000561449 BAZ1BQ9UIG0 1483 aaKnown RBP14.44□□□□□ -0.1
TCF12-226ENST00000561449 DMRT2Q9Y5R5 561 aa14.43□□□□□ -0.1
TCF12-226ENST00000561449 WIZO95785 1651 aa14.39□□□□□ -0.11
TCF12-226ENST00000561449 SCAF1Q9H7N4 1312 aaKnown RBP14.35□□□□□ -0.11
TCF12-226ENST00000561449 TOP2AP11388 1531 aaKnown RBP14.29□□□□□ -0.12
TCF12-226ENST00000561449 LAMC3Q9Y6N6 1575 aa14.15□□□□□ -0.14
TCF12-226ENST00000561449 CADPSQ9ULU8 1353 aa14.14□□□□□ -0.15
TCF12-226ENST00000561449 SUPT5HO00267 1087 aaKnown RBP14.13□□□□□ -0.15
TCF12-226ENST00000561449 NESP48681 1621 aa14.12□□□□□ -0.15
TCF12-226ENST00000561449 CCDC88BA6NC98 1476 aa14.11□□□□□ -0.15
TCF12-226ENST00000561449 CFTRP13569 1480 aa14.07□□□□□ -0.16
TCF12-226ENST00000561449 PDS5BQ9NTI5 1447 aa14.07□□□□□ -0.16
TCF12-226ENST00000561449 ERCC6Q03468 1493 aa14.05□□□□□ -0.16
TCF12-226ENST00000561449 PRDM2Q13029 1718 aa13.95□□□□□ -0.18
TCF12-226ENST00000561449 KIF21AQ7Z4S6 1674 aa13.95□□□□□ -0.18
TCF12-226ENST00000561449 FANCD2Q9BXW9 1451 aa13.95□□□□□ -0.18
TCF12-226ENST00000561449 CACNB1Q02641 598 aaPredicted RBP13.93□□□□□ -0.18
TCF12-226ENST00000561449 CEP164Q9UPV0 1460 aa13.93□□□□□ -0.18
TCF12-226ENST00000561449 PPP4R3CPQ6ZMV5 832 aa13.92□□□□□ -0.18
TCF12-226ENST00000561449 CUX2O14529 1486 aa13.9□□□□□ -0.18
TCF12-226ENST00000561449 THOC2Q8NI27 1593 aaKnown RBP13.89□□□□□ -0.19
TCF12-226ENST00000561449 MRC2Q9UBG0 1479 aa13.89□□□□□ -0.19
TCF12-226ENST00000561449 DCAF8L1A6NGE4 600 aa13.89□□□□□ -0.19
TCF12-226ENST00000561449 WDR62O43379 1518 aa13.85□□□□□ -0.19
TCF12-226ENST00000561449 ABCC8Q09428 1581 aa13.8□□□□□ -0.2
TCF12-226ENST00000561449 HOXD11P31277 338 aaPredicted RBP13.8□□□□□ -0.2
TCF12-226ENST00000561449 URB2Q14146 1524 aaKnown RBP13.79□□□□□ -0.2
TCF12-226ENST00000561449 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
TCF12-226ENST00000561449 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
TCF12-226ENST00000561449 CNKSR2Q8WXI2 1034 aa13.71□□□□□ -0.21
TCF12-226ENST00000561449 RNF39Q9H2S5 420 aa13.66□□□□□ -0.22
TCF12-226ENST00000561449 CUX1P39880 1505 aa13.65□□□□□ -0.22
TCF12-226ENST00000561449 IFT140Q96RY7 1462 aa13.65□□□□□ -0.22
TCF12-226ENST00000561449 RNF216Q9NWF9 866 aaPredicted RBP13.64□□□□□ -0.23
TCF12-226ENST00000561449 WRNQ14191 1432 aaPredicted RBP eCLIP13.64□□□□□ -0.23
TCF12-226ENST00000561449 POLA1P09884 1462 aaPredicted RBP13.62□□□□□ -0.23
TCF12-226ENST00000561449 FGD5Q6ZNL6 1462 aa13.6□□□□□ -0.23
TCF12-226ENST00000561449 TOP2BQ02880 1626 aa13.59□□□□□ -0.23
TCF12-226ENST00000561449 SOGA1O94964 1423 aa13.58□□□□□ -0.24
TCF12-226ENST00000561449 TARBP1Q13395 1621 aaKnown RBP13.57□□□□□ -0.24
TCF12-226ENST00000561449 BIVM-ERCC5R4GMW8 1640 aa13.57□□□□□ -0.24
TCF12-226ENST00000561449 SYNJ1O43426 1573 aa13.55□□□□□ -0.24
TCF12-226ENST00000561449 RAD54L2Q9Y4B4 1467 aa13.54□□□□□ -0.24
TCF12-226ENST00000561449 ZNF608Q9ULD9 1512 aaPredicted RBP13.53□□□□□ -0.24
TCF12-226ENST00000561449 WDR97A6NE52 1622 aa13.53□□□□□ -0.24
TCF12-226ENST00000561449 ABCA10Q8WWZ4 1543 aa13.5□□□□□ -0.25
TCF12-226ENST00000561449 EIF4G3O43432 1585 aaKnown RBP13.49□□□□□ -0.25
TCF12-226ENST00000561449 AQRO60306 1485 aaKnown RBP eCLIP13.48□□□□□ -0.25
TCF12-226ENST00000561449 TDRD9Q8NDG6 1382 aaKnown RBP13.47□□□□□ -0.25
TCF12-226ENST00000561449 C1QBPQ07021 282 aaKnown RBP13.44□□□□□ -0.26
TCF12-226ENST00000561449 GAPVD1Q14C86 1478 aa13.43□□□□□ -0.26
TCF12-226ENST00000561449 GRIN2BQ13224 1484 aa13.42□□□□□ -0.26
TCF12-226ENST00000561449 ABCA5Q8WWZ7 1642 aa13.42□□□□□ -0.26
TCF12-226ENST00000561449 MAGI1Q96QZ7 1491 aaPredicted RBP13.38□□□□□ -0.27
TCF12-226ENST00000561449 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
TCF12-226ENST00000561449 DNAJC5Q9H3Z4 198 aa13.36□□□□□ -0.27
TCF12-226ENST00000561449 PBRM1Q86U86 1689 aa13.36□□□□□ -0.27
TCF12-226ENST00000561449 KIF27Q86VH2 1401 aa13.36□□□□□ -0.27
TCF12-226ENST00000561449 SNAPC4Q5SXM2 1469 aa13.36□□□□□ -0.27
TCF12-226ENST00000561449 OSCARQ8IYS5 282 aa13.35□□□□□ -0.27
TCF12-226ENST00000561449 ERICH3Q5RHP9 1530 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms