RNA–Protein interactions for RNA: ENST00000561314.5

MARK3-226, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 3

Gene MARK3, Length 724 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-226ENST00000561314 NISCHQ9Y2I1 1504 aa26.08■■□□□ 1.77
MARK3-226ENST00000561314 AEBP2Q6ZN18 517 aaPredicted RBP23.85■■□□□ 1.41
MARK3-226ENST00000561314 CHIC1Q5VXU3 224 aa23.52■■□□□ 1.36
MARK3-226ENST00000561314 CCDC180Q9P1Z9 1646 aa23.01■■□□□ 1.27
MARK3-226ENST00000561314 ABCC9O60706 1549 aa22.55■■□□□ 1.2
MARK3-226ENST00000561314 DCAF8L2P0C7V8 631 aa21.83■■□□□ 1.09
MARK3-226ENST00000561314 ZCCHC6Q5VYS8 1495 aaKnown RBP21.71■■□□□ 1.07
MARK3-226ENST00000561314 NACADO15069 1562 aa21.7■■□□□ 1.06
MARK3-226ENST00000561314 RB1CC1Q8TDY2 1594 aa21.67■■□□□ 1.06
MARK3-226ENST00000561314 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
MARK3-226ENST00000561314 DCAF1Q9Y4B6 1507 aa21.57■■□□□ 1.04
MARK3-226ENST00000561314 PABPN1Q86U42 306 aaKnown RBP eCLIP21.19■□□□□ 0.98
MARK3-226ENST00000561314 UNC13AQ9UPW8 1703 aa21.12■□□□□ 0.97
MARK3-226ENST00000561314 BICRAQ9NZM4 1560 aa21.07■□□□□ 0.96
MARK3-226ENST00000561314 SCRIBQ14160 1630 aa21.04■□□□□ 0.96
MARK3-226ENST00000561314 SHROOM4Q9ULL8 1493 aa20.81■□□□□ 0.92
MARK3-226ENST00000561314 DNAJC5BQ9UF47 199 aa20.79■□□□□ 0.92
MARK3-226ENST00000561314 PHF23Q9BUL5 403 aaPredicted RBP20.7■□□□□ 0.9
MARK3-226ENST00000561314 EIF4G1Q04637 1599 aaKnown RBP20.48■□□□□ 0.87
MARK3-226ENST00000561314 CC2D2AQ9P2K1 1620 aa20.36■□□□□ 0.85
MARK3-226ENST00000561314 CECR2Q9BXF3 1484 aa20.34■□□□□ 0.85
MARK3-226ENST00000561314 SENP3Q9H4L4 574 aaPredicted RBP20.21■□□□□ 0.83
MARK3-226ENST00000561314 BAZ1AQ9NRL2 1556 aaPredicted RBP20.16■□□□□ 0.82
MARK3-226ENST00000561314 SMARCA4P51532 1647 aa20.15■□□□□ 0.82
MARK3-226ENST00000561314 NCAPD3P42695 1498 aa20.11■□□□□ 0.81
MARK3-226ENST00000561314 ATAD2BQ9ULI0 1458 aa20.11■□□□□ 0.81
MARK3-226ENST00000561314 MROH2BQ7Z745 1585 aa20.1■□□□□ 0.81
MARK3-226ENST00000561314 SMARCA2P51531 1590 aa20.01■□□□□ 0.79
MARK3-226ENST00000561314 PEG3Q9GZU2 1588 aa19.99■□□□□ 0.79
MARK3-226ENST00000561314 RSF1Q96T23 1441 aaPredicted RBP19.95■□□□□ 0.78
MARK3-226ENST00000561314 HMGXB3Q12766 1538 aa19.91■□□□□ 0.78
MARK3-226ENST00000561314 BAZ1BQ9UIG0 1483 aaKnown RBP19.89■□□□□ 0.77
MARK3-226ENST00000561314 WIZO95785 1651 aa19.83■□□□□ 0.76
MARK3-226ENST00000561314 TOP2AP11388 1531 aaKnown RBP19.62■□□□□ 0.73
MARK3-226ENST00000561314 NESP48681 1621 aa19.56■□□□□ 0.72
MARK3-226ENST00000561314 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
MARK3-226ENST00000561314 CADPSQ9ULU8 1353 aa19.53■□□□□ 0.72
MARK3-226ENST00000561314 CCDC88BA6NC98 1476 aa19.48■□□□□ 0.71
MARK3-226ENST00000561314 LAMC3Q9Y6N6 1575 aa19.45■□□□□ 0.7
MARK3-226ENST00000561314 CFTRP13569 1480 aa19.41■□□□□ 0.7
MARK3-226ENST00000561314 PDS5BQ9NTI5 1447 aa19.39■□□□□ 0.69
MARK3-226ENST00000561314 ERCC6Q03468 1493 aa19.39■□□□□ 0.69
MARK3-226ENST00000561314 FANCD2Q9BXW9 1451 aa19.24■□□□□ 0.67
MARK3-226ENST00000561314 PLPPR3Q6T4P5 718 aa19.22■□□□□ 0.67
MARK3-226ENST00000561314 KIF21AQ7Z4S6 1674 aa19.21■□□□□ 0.67
MARK3-226ENST00000561314 CUX2O14529 1486 aa19.17■□□□□ 0.66
MARK3-226ENST00000561314 CEP164Q9UPV0 1460 aa19.17■□□□□ 0.66
MARK3-226ENST00000561314 MRC2Q9UBG0 1479 aa19.15■□□□□ 0.66
MARK3-226ENST00000561314 THOC2Q8NI27 1593 aaKnown RBP19.15■□□□□ 0.66
MARK3-226ENST00000561314 WDR62O43379 1518 aa19.06■□□□□ 0.64
MARK3-226ENST00000561314 PRDM2Q13029 1718 aa19.05■□□□□ 0.64
MARK3-226ENST00000561314 URB2Q14146 1524 aaKnown RBP19.05■□□□□ 0.64
MARK3-226ENST00000561314 ABCC8Q09428 1581 aa18.95■□□□□ 0.62
MARK3-226ENST00000561314 TOPBP1Q92547 1522 aa18.95■□□□□ 0.62
MARK3-226ENST00000561314 DNMBPQ6XZF7 1577 aa18.89■□□□□ 0.61
MARK3-226ENST00000561314 CUX1P39880 1505 aa18.84■□□□□ 0.61
MARK3-226ENST00000561314 IFT140Q96RY7 1462 aa18.81■□□□□ 0.6
MARK3-226ENST00000561314 POLA1P09884 1462 aaPredicted RBP18.79■□□□□ 0.6
MARK3-226ENST00000561314 SOGA1O94964 1423 aa18.76■□□□□ 0.59
MARK3-226ENST00000561314 WRNQ14191 1432 aaPredicted RBP eCLIP18.76■□□□□ 0.59
MARK3-226ENST00000561314 FGD5Q6ZNL6 1462 aa18.74■□□□□ 0.59
MARK3-226ENST00000561314 RAD54L2Q9Y4B4 1467 aa18.74■□□□□ 0.59
MARK3-226ENST00000561314 ZNF608Q9ULD9 1512 aaPredicted RBP18.74■□□□□ 0.59
MARK3-226ENST00000561314 FOXD1Q16676 465 aa18.72■□□□□ 0.59
MARK3-226ENST00000561314 TARBP1Q13395 1621 aaKnown RBP18.71■□□□□ 0.59
MARK3-226ENST00000561314 TDRD9Q8NDG6 1382 aaKnown RBP18.68■□□□□ 0.58
MARK3-226ENST00000561314 AQRO60306 1485 aaKnown RBP eCLIP18.67■□□□□ 0.586e-8■■■□□ 16.4
MARK3-226ENST00000561314 SYNJ1O43426 1573 aa18.66■□□□□ 0.58
MARK3-226ENST00000561314 TOP2BQ02880 1626 aa18.66■□□□□ 0.58
MARK3-226ENST00000561314 DNAJC5Q9H3Z4 198 aa18.63■□□□□ 0.57
MARK3-226ENST00000561314 BIVM-ERCC5R4GMW8 1640 aa18.62■□□□□ 0.57
MARK3-226ENST00000561314 ABCA10Q8WWZ4 1543 aa18.59■□□□□ 0.57
MARK3-226ENST00000561314 EIF4G3O43432 1585 aaKnown RBP18.55■□□□□ 0.56
MARK3-226ENST00000561314 GAPVD1Q14C86 1478 aa18.52■□□□□ 0.55
MARK3-226ENST00000561314 OSCARQ8IYS5 282 aa18.51■□□□□ 0.55
MARK3-226ENST00000561314 WDR97A6NE52 1622 aa18.51■□□□□ 0.55
MARK3-226ENST00000561314 GRIN2BQ13224 1484 aa18.49■□□□□ 0.55
MARK3-226ENST00000561314 TRIM41Q8WV44 630 aa18.45■□□□□ 0.54
MARK3-226ENST00000561314 ABCA5Q8WWZ7 1642 aa18.44■□□□□ 0.54
MARK3-226ENST00000561314 FBLN2P98095 1184 aa18.43■□□□□ 0.54
MARK3-226ENST00000561314 SNAPC4Q5SXM2 1469 aa18.42■□□□□ 0.54
MARK3-226ENST00000561314 MAGI1Q96QZ7 1491 aaPredicted RBP18.41■□□□□ 0.54
MARK3-226ENST00000561314 CHMP7Q8WUX9 453 aaPredicted RBP18.41■□□□□ 0.54
MARK3-226ENST00000561314 IGF1RP08069 1367 aa18.38■□□□□ 0.53
MARK3-226ENST00000561314 KIF27Q86VH2 1401 aa18.37■□□□□ 0.53
MARK3-226ENST00000561314 SYNJ2O15056 1496 aa18.35■□□□□ 0.53
MARK3-226ENST00000561314 ERICH3Q5RHP9 1530 aa18.33■□□□□ 0.53
MARK3-226ENST00000561314 PBRM1Q86U86 1689 aa18.32■□□□□ 0.52
MARK3-226ENST00000561314 FHAD1B1AJZ9 1412 aa18.32■□□□□ 0.52
MARK3-226ENST00000561314 CHD1O14646 1710 aa18.28■□□□□ 0.52
MARK3-226ENST00000561314 RUSC2Q8N2Y8 1516 aa18.27■□□□□ 0.51
MARK3-226ENST00000561314 ADRA2BP18089 450 aa18.24■□□□□ 0.51
MARK3-226ENST00000561314 GRIN2AQ12879 1464 aa18.24■□□□□ 0.51
MARK3-226ENST00000561314 ADAMTS12P58397 1594 aa18.24■□□□□ 0.51
MARK3-226ENST00000561314 CARMIL1Q5VZK9 1371 aa18.22■□□□□ 0.51
MARK3-226ENST00000561314 PPP6R1Q9UPN7 881 aa18.2■□□□□ 0.5
MARK3-226ENST00000561314 NUP160Q12769 1436 aa18.19■□□□□ 0.5
MARK3-226ENST00000561314 CLASP1Q7Z460 1538 aa18.16■□□□□ 0.5
MARK3-226ENST00000561314 CSRNP3Q8WYN3 585 aa18.13■□□□□ 0.49
MARK3-226ENST00000561314 CEP170Q5SW79 1584 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms