RNA–Protein interactions for RNA: ENST00000561291.5

ZHX3-221, Transcript of zinc fingers and homeoboxes 3, humanhuman

TSL 4

Gene ZHX3, Length 528 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZHX3-221ENST00000561291 AEBP2Q6ZN18 517 aaPredicted RBP21.27■■□□□ 1
ZHX3-221ENST00000561291 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
ZHX3-221ENST00000561291 NISCHQ9Y2I1 1504 aa18.48■□□□□ 0.55
ZHX3-221ENST00000561291 PHF23Q9BUL5 403 aaPredicted RBP18.07■□□□□ 0.48
ZHX3-221ENST00000561291 SENP3Q9H4L4 574 aaPredicted RBP17.97■□□□□ 0.47
ZHX3-221ENST00000561291 FOXD1Q16676 465 aa16.77■□□□□ 0.28
ZHX3-221ENST00000561291 PLPPR3Q6T4P5 718 aa16.49■□□□□ 0.23
ZHX3-221ENST00000561291 CCDC180Q9P1Z9 1646 aa16.12■□□□□ 0.17
ZHX3-221ENST00000561291 ABCC9O60706 1549 aa16.01■□□□□ 0.15
ZHX3-221ENST00000561291 PPP6R1Q9UPN7 881 aa16.01■□□□□ 0.15
ZHX3-221ENST00000561291 ADRA2BP18089 450 aa15.95■□□□□ 0.14
ZHX3-221ENST00000561291 DCAF8L2P0C7V8 631 aa15.82■□□□□ 0.12
ZHX3-221ENST00000561291 PIAS4Q8N2W9 510 aaPredicted RBP15.71■□□□□ 0.11
ZHX3-221ENST00000561291 MSH5O43196 834 aa15.46■□□□□ 0.07
ZHX3-221ENST00000561291 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
ZHX3-221ENST00000561291 NACADO15069 1562 aa15.24■□□□□ 0.03
ZHX3-221ENST00000561291 RB1CC1Q8TDY2 1594 aa15.24■□□□□ 0.03
ZHX3-221ENST00000561291 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
ZHX3-221ENST00000561291 MYO15BQ96JP2 1530 aa15.12■□□□□ 0.01
ZHX3-221ENST00000561291 SHROOM4Q9ULL8 1493 aa15.09■□□□□ 0.01
ZHX3-221ENST00000561291 PABPN1Q86U42 306 aaKnown RBP eCLIP15.08■□□□□ 0
ZHX3-221ENST00000561291 DNAJC5BQ9UF47 199 aa15.06■□□□□ 0
ZHX3-221ENST00000561291 SCRIBQ14160 1630 aa14.99□□□□□ -0.01
ZHX3-221ENST00000561291 UNC13AQ9UPW8 1703 aa14.95□□□□□ -0.02
ZHX3-221ENST00000561291 BICRAQ9NZM4 1560 aa14.83□□□□□ -0.04
ZHX3-221ENST00000561291 MAPK8IP2Q13387 824 aaPredicted RBP14.55□□□□□ -0.08
ZHX3-221ENST00000561291 PPP4R3CPQ6ZMV5 832 aa14.54□□□□□ -0.08
ZHX3-221ENST00000561291 POTEDQ86YR6 584 aa14.53□□□□□ -0.08
ZHX3-221ENST00000561291 CC2D2AQ9P2K1 1620 aa14.48□□□□□ -0.09
ZHX3-221ENST00000561291 CECR2Q9BXF3 1484 aa14.47□□□□□ -0.09
ZHX3-221ENST00000561291 SCAF1Q9H7N4 1312 aaKnown RBP14.44□□□□□ -0.1
ZHX3-221ENST00000561291 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
ZHX3-221ENST00000561291 SUPT5HO00267 1087 aaKnown RBP14.37□□□□□ -0.11
ZHX3-221ENST00000561291 DMRT2Q9Y5R5 561 aa14.35□□□□□ -0.11
ZHX3-221ENST00000561291 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
ZHX3-221ENST00000561291 BAZ1AQ9NRL2 1556 aaPredicted RBP14.3□□□□□ -0.12
ZHX3-221ENST00000561291 RSF1Q96T23 1441 aaPredicted RBP14.25□□□□□ -0.13
ZHX3-221ENST00000561291 SMARCA4P51532 1647 aa14.24□□□□□ -0.13
ZHX3-221ENST00000561291 ATAD2BQ9ULI0 1458 aa14.2□□□□□ -0.14
ZHX3-221ENST00000561291 CNKSR2Q8WXI2 1034 aa14.15□□□□□ -0.14
ZHX3-221ENST00000561291 BAZ1BQ9UIG0 1483 aaKnown RBP14.13□□□□□ -0.15
ZHX3-221ENST00000561291 SMARCA2P51531 1590 aa14.13□□□□□ -0.15
ZHX3-221ENST00000561291 NCAPD3P42695 1498 aa14.12□□□□□ -0.15
ZHX3-221ENST00000561291 WIZO95785 1651 aa14.11□□□□□ -0.15
ZHX3-221ENST00000561291 KCNA4P22459 653 aa14.01□□□□□ -0.17
ZHX3-221ENST00000561291 NCBP3Q53F19 620 aaKnown RBP14.01□□□□□ -0.17
ZHX3-221ENST00000561291 PEG3Q9GZU2 1588 aa14□□□□□ -0.17
ZHX3-221ENST00000561291 HMGXB3Q12766 1538 aa13.98□□□□□ -0.17
ZHX3-221ENST00000561291 HOXD11P31277 338 aaPredicted RBP13.97□□□□□ -0.17
ZHX3-221ENST00000561291 TOP2AP11388 1531 aaKnown RBP13.95□□□□□ -0.18
ZHX3-221ENST00000561291 RNF216Q9NWF9 866 aaPredicted RBP13.94□□□□□ -0.18
ZHX3-221ENST00000561291 NPM3O75607 178 aaKnown RBP13.92□□□□□ -0.18
ZHX3-221ENST00000561291 CCDC88BA6NC98 1476 aa13.88□□□□□ -0.19
ZHX3-221ENST00000561291 DNAJC5Q9H3Z4 198 aa13.82□□□□□ -0.2
ZHX3-221ENST00000561291 NESP48681 1621 aa13.81□□□□□ -0.2
ZHX3-221ENST00000561291 CADPSQ9ULU8 1353 aa13.81□□□□□ -0.2
ZHX3-221ENST00000561291 CUX2O14529 1486 aa13.8□□□□□ -0.2
ZHX3-221ENST00000561291 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
ZHX3-221ENST00000561291 PDS5BQ9NTI5 1447 aa13.7□□□□□ -0.22
ZHX3-221ENST00000561291 CFTRP13569 1480 aa13.69□□□□□ -0.22
ZHX3-221ENST00000561291 DCAF8L1A6NGE4 600 aa13.66□□□□□ -0.22
ZHX3-221ENST00000561291 LAMC3Q9Y6N6 1575 aa13.66□□□□□ -0.22
ZHX3-221ENST00000561291 THOC2Q8NI27 1593 aaKnown RBP13.64□□□□□ -0.23
ZHX3-221ENST00000561291 FANCD2Q9BXW9 1451 aa13.64□□□□□ -0.23
ZHX3-221ENST00000561291 KIF21AQ7Z4S6 1674 aa13.6□□□□□ -0.23
ZHX3-221ENST00000561291 CEP164Q9UPV0 1460 aa13.59□□□□□ -0.23
ZHX3-221ENST00000561291 MRC2Q9UBG0 1479 aa13.5□□□□□ -0.25
ZHX3-221ENST00000561291 TRIM41Q8WV44 630 aa13.49□□□□□ -0.25
ZHX3-221ENST00000561291 WRNQ14191 1432 aaPredicted RBP eCLIP13.46□□□□□ -0.26
ZHX3-221ENST00000561291 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
ZHX3-221ENST00000561291 URB2Q14146 1524 aaKnown RBP13.44□□□□□ -0.26
ZHX3-221ENST00000561291 WDR62O43379 1518 aa13.44□□□□□ -0.26
ZHX3-221ENST00000561291 TOPBP1Q92547 1522 aa13.4□□□□□ -0.26
ZHX3-221ENST00000561291 CUX1P39880 1505 aa13.38□□□□□ -0.27
ZHX3-221ENST00000561291 SOGA1O94964 1423 aa13.37□□□□□ -0.27
ZHX3-221ENST00000561291 DNMBPQ6XZF7 1577 aa13.35□□□□□ -0.27
ZHX3-221ENST00000561291 FGD5Q6ZNL6 1462 aa13.35□□□□□ -0.27
ZHX3-221ENST00000561291 RAD54L2Q9Y4B4 1467 aa13.35□□□□□ -0.27
ZHX3-221ENST00000561291 FAM9AQ8IZU1 332 aaPredicted RBP13.33□□□□□ -0.28
ZHX3-221ENST00000561291 PRDM2Q13029 1718 aa13.33□□□□□ -0.28
ZHX3-221ENST00000561291 TDRD9Q8NDG6 1382 aaKnown RBP13.32□□□□□ -0.28
ZHX3-221ENST00000561291 POLA1P09884 1462 aaPredicted RBP13.31□□□□□ -0.28
ZHX3-221ENST00000561291 SYNJ1O43426 1573 aa13.31□□□□□ -0.28
ZHX3-221ENST00000561291 RNF39Q9H2S5 420 aa13.29□□□□□ -0.28
ZHX3-221ENST00000561291 IFT140Q96RY7 1462 aa13.28□□□□□ -0.28
ZHX3-221ENST00000561291 FBLN2P98095 1184 aa13.26□□□□□ -0.29
ZHX3-221ENST00000561291 EHMT2Q96KQ7 1210 aa13.26□□□□□ -0.29
ZHX3-221ENST00000561291 TOP2BQ02880 1626 aa13.25□□□□□ -0.29
ZHX3-221ENST00000561291 AQRO60306 1485 aaKnown RBP eCLIP13.25□□□□□ -0.29
ZHX3-221ENST00000561291 ZNF608Q9ULD9 1512 aaPredicted RBP13.24□□□□□ -0.29
ZHX3-221ENST00000561291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.24□□□□□ -0.29
ZHX3-221ENST00000561291 SLC4A1APQ9BWU0 796 aaKnown RBP13.24□□□□□ -0.29
ZHX3-221ENST00000561291 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
ZHX3-221ENST00000561291 BIVM-ERCC5R4GMW8 1640 aa13.18□□□□□ -0.3
ZHX3-221ENST00000561291 KIF27Q86VH2 1401 aa13.17□□□□□ -0.3
ZHX3-221ENST00000561291 CHMP7Q8WUX9 453 aaPredicted RBP13.16□□□□□ -0.3
ZHX3-221ENST00000561291 GAPVD1Q14C86 1478 aa13.16□□□□□ -0.3
ZHX3-221ENST00000561291 ABCA10Q8WWZ4 1543 aa13.15□□□□□ -0.3
ZHX3-221ENST00000561291 OSCARQ8IYS5 282 aa13.15□□□□□ -0.3
ZHX3-221ENST00000561291 RUSC2Q8N2Y8 1516 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms