RNA–Protein interactions for RNA: ENST00000561286.5

PCK2-216, Transcript of phosphoenolpyruvate carboxykinase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene PCK2, Length 2,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCK2-216ENST00000561286 NISCHQ9Y2I1 1504 aa30.72■■■□□ 2.51
PCK2-216ENST00000561286 CCDC180Q9P1Z9 1646 aa26.92■■□□□ 1.9
PCK2-216ENST00000561286 ZCCHC6Q5VYS8 1495 aaKnown RBP25.79■■□□□ 1.72
PCK2-216ENST00000561286 DCAF1Q9Y4B6 1507 aa25.45■■□□□ 1.66
PCK2-216ENST00000561286 ABCC9O60706 1549 aa25.4■■□□□ 1.66
PCK2-216ENST00000561286 DCAF8L2P0C7V8 631 aa25.34■■□□□ 1.65
PCK2-216ENST00000561286 MYO15BQ96JP2 1530 aa25.2■■□□□ 1.62
PCK2-216ENST00000561286 NACADO15069 1562 aa25.06■■□□□ 1.6
PCK2-216ENST00000561286 SHROOM4Q9ULL8 1493 aa24.91■■□□□ 1.58
PCK2-216ENST00000561286 RB1CC1Q8TDY2 1594 aa24.87■■□□□ 1.57
PCK2-216ENST00000561286 SCRIBQ14160 1630 aa24.65■■□□□ 1.54
PCK2-216ENST00000561286 UNC13AQ9UPW8 1703 aa24.34■■□□□ 1.49
PCK2-216ENST00000561286 BICRAQ9NZM4 1560 aa24.04■■□□□ 1.44
PCK2-216ENST00000561286 SUPT5HO00267 1087 aaKnown RBP23.94■■□□□ 1.42
PCK2-216ENST00000561286 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.41
PCK2-216ENST00000561286 CECR2Q9BXF3 1484 aa23.81■■□□□ 1.4
PCK2-216ENST00000561286 BAZ1AQ9NRL2 1556 aaPredicted RBP23.77■■□□□ 1.4
PCK2-216ENST00000561286 RSF1Q96T23 1441 aaPredicted RBP23.75■■□□□ 1.39
PCK2-216ENST00000561286 MROH2BQ7Z745 1585 aa23.69■■□□□ 1.38
PCK2-216ENST00000561286 SMARCA4P51532 1647 aa23.65■■□□□ 1.38
PCK2-216ENST00000561286 WIZO95785 1651 aa23.51■■□□□ 1.35
PCK2-216ENST00000561286 HRCP23327 699 aa23.47■■□□□ 1.35
PCK2-216ENST00000561286 PEG3Q9GZU2 1588 aa23.39■■□□□ 1.33
PCK2-216ENST00000561286 EIF4G1Q04637 1599 aaKnown RBP23.36■■□□□ 1.33
PCK2-216ENST00000561286 TOP2AP11388 1531 aaKnown RBP23.31■■□□□ 1.32
PCK2-216ENST00000561286 SMARCA2P51531 1590 aa23.31■■□□□ 1.32
PCK2-216ENST00000561286 ATAD2BQ9ULI0 1458 aa23.25■■□□□ 1.31
PCK2-216ENST00000561286 PELP1Q8IZL8 1130 aaKnown RBP23.21■■□□□ 1.31
PCK2-216ENST00000561286 BAZ1BQ9UIG0 1483 aaKnown RBP23.15■■□□□ 1.3
PCK2-216ENST00000561286 HMGXB3Q12766 1538 aa23.09■■□□□ 1.29
PCK2-216ENST00000561286 NCAPD3P42695 1498 aa23.08■■□□□ 1.29
PCK2-216ENST00000561286 CC2D2AQ9P2K1 1620 aa23.03■■□□□ 1.28
PCK2-216ENST00000561286 CCDC88BA6NC98 1476 aa23.02■■□□□ 1.28
PCK2-216ENST00000561286 CHIC1Q5VXU3 224 aa22.87■■□□□ 1.25
PCK2-216ENST00000561286 DNAJC5BQ9UF47 199 aa22.81■■□□□ 1.24
PCK2-216ENST00000561286 PCGF6Q9BYE7 350 aa22.7■■□□□ 1.22
PCK2-216ENST00000561286 PPARGC1BQ86YN6 1023 aaKnown RBP22.63■■□□□ 1.21
PCK2-216ENST00000561286 TRIM41Q8WV44 630 aa22.57■■□□□ 1.2
PCK2-216ENST00000561286 CFTRP13569 1480 aa22.55■■□□□ 1.2
PCK2-216ENST00000561286 PRDM2Q13029 1718 aa22.53■■□□□ 1.2
PCK2-216ENST00000561286 ABCC8Q09428 1581 aa22.5■■□□□ 1.19
PCK2-216ENST00000561286 MYT1Q01538 1121 aa22.5■■□□□ 1.19
PCK2-216ENST00000561286 CADPSQ9ULU8 1353 aa22.48■■□□□ 1.19
PCK2-216ENST00000561286 WRNQ14191 1432 aaPredicted RBP eCLIP22.41■■□□□ 1.18
PCK2-216ENST00000561286 LAMC3Q9Y6N6 1575 aa22.37■■□□□ 1.17
PCK2-216ENST00000561286 SYNJ1O43426 1573 aa22.29■■□□□ 1.16
PCK2-216ENST00000561286 TOP2BQ02880 1626 aa22.26■■□□□ 1.15
PCK2-216ENST00000561286 NESP48681 1621 aa22.25■■□□□ 1.15
PCK2-216ENST00000561286 BIVM-ERCC5R4GMW8 1640 aa22.25■■□□□ 1.15
PCK2-216ENST00000561286 ZEB1P37275 1124 aaPredicted RBP22.24■■□□□ 1.15
PCK2-216ENST00000561286 FANCD2Q9BXW9 1451 aa22.24■■□□□ 1.15
PCK2-216ENST00000561286 PDS5BQ9NTI5 1447 aa22.18■■□□□ 1.14
PCK2-216ENST00000561286 TRIM26Q12899 539 aaPredicted RBP22.18■■□□□ 1.14
PCK2-216ENST00000561286 CUX1P39880 1505 aa22.17■■□□□ 1.14
PCK2-216ENST00000561286 SCAF1Q9H7N4 1312 aaKnown RBP22.16■■□□□ 1.14
PCK2-216ENST00000561286 CEP164Q9UPV0 1460 aa22.13■■□□□ 1.13
PCK2-216ENST00000561286 EEA1Q15075 1411 aa22.1■■□□□ 1.13
PCK2-216ENST00000561286 FAM9AQ8IZU1 332 aaPredicted RBP22.09■■□□□ 1.13
PCK2-216ENST00000561286 KIF21AQ7Z4S6 1674 aa22.06■■□□□ 1.12
PCK2-216ENST00000561286 DNMBPQ6XZF7 1577 aa22.05■■□□□ 1.12
PCK2-216ENST00000561286 SOGA1O94964 1423 aa22.03■■□□□ 1.12
PCK2-216ENST00000561286 TOPBP1Q92547 1522 aa21.99■■□□□ 1.11
PCK2-216ENST00000561286 FGD5Q6ZNL6 1462 aa21.96■■□□□ 1.11
PCK2-216ENST00000561286 LOC105371045A0A1W2PR82 267 aa21.94■■□□□ 1.1
PCK2-216ENST00000561286 URB2Q14146 1524 aaKnown RBP21.93■■□□□ 1.1
PCK2-216ENST00000561286 RUSC2Q8N2Y8 1516 aa21.93■■□□□ 1.1
PCK2-216ENST00000561286 CSRNP3Q8WYN3 585 aa21.9■■□□□ 1.1
PCK2-216ENST00000561286 MRC2Q9UBG0 1479 aa21.88■■□□□ 1.09
PCK2-216ENST00000561286 KIF27Q86VH2 1401 aa21.87■■□□□ 1.09
PCK2-216ENST00000561286 POLA1P09884 1462 aaPredicted RBP21.87■■□□□ 1.09
PCK2-216ENST00000561286 ERCC6Q03468 1493 aa21.86■■□□□ 1.09
PCK2-216ENST00000561286 CUX2O14529 1486 aa21.8■■□□□ 1.08
PCK2-216ENST00000561286 KIF21BO75037 1637 aa21.8■■□□□ 1.08
PCK2-216ENST00000561286 ABCA10Q8WWZ4 1543 aa21.78■■□□□ 1.08
PCK2-216ENST00000561286 WDR62O43379 1518 aa21.77■■□□□ 1.08
PCK2-216ENST00000561286 GOLGA3Q08378 1498 aa21.75■■□□□ 1.07
PCK2-216ENST00000561286 RAD54L2Q9Y4B4 1467 aa21.75■■□□□ 1.07
PCK2-216ENST00000561286 WDR97A6NE52 1622 aa21.74■■□□□ 1.07
PCK2-216ENST00000561286 EHMT2Q96KQ7 1210 aa21.74■■□□□ 1.07
PCK2-216ENST00000561286 THOC2Q8NI27 1593 aaKnown RBP21.72■■□□□ 1.07
PCK2-216ENST00000561286 ACIN1Q9UKV3 1341 aaKnown RBP21.7■■□□□ 1.06
PCK2-216ENST00000561286 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
PCK2-216ENST00000561286 TARBP1Q13395 1621 aaKnown RBP21.67■■□□□ 1.06
PCK2-216ENST00000561286 PRXQ9BXM0 1461 aa21.66■■□□□ 1.06
PCK2-216ENST00000561286 TNIKQ9UKE5 1360 aa21.64■■□□□ 1.06
PCK2-216ENST00000561286 UBTFP17480 764 aaKnown RBP21.63■■□□□ 1.05
PCK2-216ENST00000561286 ABCA5Q8WWZ7 1642 aa21.62■■□□□ 1.05
PCK2-216ENST00000561286 IGF1RP08069 1367 aa21.62■■□□□ 1.05
PCK2-216ENST00000561286 RAPGEF2Q9Y4G8 1499 aa21.62■■□□□ 1.05
PCK2-216ENST00000561286 IFT140Q96RY7 1462 aa21.61■■□□□ 1.05
PCK2-216ENST00000561286 CUL7Q14999 1698 aa21.58■■□□□ 1.04
PCK2-216ENST00000561286 GAPVD1Q14C86 1478 aa21.57■■□□□ 1.04
PCK2-216ENST00000561286 TDRD9Q8NDG6 1382 aaKnown RBP21.55■■□□□ 1.04
PCK2-216ENST00000561286 CARMIL1Q5VZK9 1371 aa21.54■■□□□ 1.04
PCK2-216ENST00000561286 CEP162Q5TB80 1403 aa21.51■■□□□ 1.03
PCK2-216ENST00000561286 CENPBP07199 599 aaPredicted RBP21.51■■□□□ 1.03
PCK2-216ENST00000561286 PBRM1Q86U86 1689 aa21.5■■□□□ 1.03
PCK2-216ENST00000561286 NEUROD1Q13562 356 aa21.48■■□□□ 1.03
PCK2-216ENST00000561286 AQRO60306 1485 aaKnown RBP eCLIP21.43■■□□□ 1.025e-7■■■■■ 36
PCK2-216ENST00000561286 GRIN2BQ13224 1484 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms